RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 PWWP2BQ6NUJ5 590 aa10.59□□□□□ -0.71
HDGFL3-204ENST00000563790 DPY19L3Q6ZPD9 716 aa10.59□□□□□ -0.71
HDGFL3-204ENST00000563790 RUFY3Q7L099 469 aa10.59□□□□□ -0.71
HDGFL3-204ENST00000563790 TRAPPC11Q7Z392 1133 aa10.59□□□□□ -0.71
HDGFL3-204ENST00000563790 P3H2Q8IVL5 708 aa10.59□□□□□ -0.71
HDGFL3-204ENST00000563790 ZZZ3Q8IYH5 903 aa10.59□□□□□ -0.71
HDGFL3-204ENST00000563790 MR1Q95460 341 aa10.59□□□□□ -0.71
HDGFL3-204ENST00000563790 GBP5Q96PP8 586 aa10.59□□□□□ -0.71
HDGFL3-204ENST00000563790 GSDMCQ9BYG8 508 aa10.59□□□□□ -0.71
HDGFL3-204ENST00000563790 HS3ST4Q9Y661 456 aa10.59□□□□□ -0.71
HDGFL3-204ENST00000563790 MT-CO1P00395 513 aa10.58□□□□□ -0.72
HDGFL3-204ENST00000563790 GARTP22102 1010 aa10.58□□□□□ -0.72
HDGFL3-204ENST00000563790 KRT2P35908 639 aa10.58□□□□□ -0.72
HDGFL3-204ENST00000563790 KIAA1024LP59773 190 aa10.58□□□□□ -0.72
HDGFL3-204ENST00000563790 CYB5D1Q6P9G0 228 aa10.58□□□□□ -0.72
HDGFL3-204ENST00000563790 BHLHA9Q7RTU4 235 aa10.58□□□□□ -0.72
HDGFL3-204ENST00000563790 CLYBLQ8N0X4 340 aa10.58□□□□□ -0.72
HDGFL3-204ENST00000563790 MYCT1Q8N699 235 aa10.58□□□□□ -0.72
HDGFL3-204ENST00000563790 LILRB4Q8NHJ6 448 aa10.58□□□□□ -0.72
HDGFL3-204ENST00000563790 RNF139Q8WU17 664 aa10.58□□□□□ -0.72
HDGFL3-204ENST00000563790 MAGED4Q96JG8 741 aa10.58□□□□□ -0.72
HDGFL3-204ENST00000563790 PPP1R9BQ96SB3 815 aa10.58□□□□□ -0.72
HDGFL3-204ENST00000563790 CHST8Q9H2A9 424 aa10.58□□□□□ -0.72
HDGFL3-204ENST00000563790 YLPM1P49750 1951 aaKnown RBP10.57□□□□□ -0.72
HDGFL3-204ENST00000563790 TTC24A2A3L6 582 aaPredicted RBP10.57□□□□□ -0.72
HDGFL3-204ENST00000563790 E9PLN8 166 aa10.57□□□□□ -0.72
HDGFL3-204ENST00000563790 TOX3O15405 576 aaPredicted RBP10.57□□□□□ -0.72
HDGFL3-204ENST00000563790 MMP20O60882 483 aa10.57□□□□□ -0.72
HDGFL3-204ENST00000563790 PMPCBO75439 489 aa10.57□□□□□ -0.72
HDGFL3-204ENST00000563790 C9P02748 559 aa10.57□□□□□ -0.72
HDGFL3-204ENST00000563790 ERBB2P04626 1255 aa10.57□□□□□ -0.72
HDGFL3-204ENST00000563790 FDPSP14324 419 aaKnown RBP10.57□□□□□ -0.72
HDGFL3-204ENST00000563790 CXCR3P49682 368 aa10.57□□□□□ -0.72
HDGFL3-204ENST00000563790 ILF3Q12906 894 aaKnown RBP eCLIP10.57□□□□□ -0.72
HDGFL3-204ENST00000563790 PM20D1Q6GTS8 502 aa10.57□□□□□ -0.72
HDGFL3-204ENST00000563790 CXorf57Q6NSI4 855 aaKnown RBP10.57□□□□□ -0.72
HDGFL3-204ENST00000563790 NAPRTQ6XQN6 538 aa10.57□□□□□ -0.72
HDGFL3-204ENST00000563790 PLXDC1Q8IUK5 500 aa10.57□□□□□ -0.72
HDGFL3-204ENST00000563790 LRRC75A-AS1Q8N1F1 130 aa10.57□□□□□ -0.72
HDGFL3-204ENST00000563790 C9orf72Q96LT7 481 aa10.57□□□□□ -0.72
HDGFL3-204ENST00000563790 VKORC1Q9BQB6 163 aa10.57□□□□□ -0.72
HDGFL3-204ENST00000563790 REEP2Q9BRK0 252 aa10.57□□□□□ -0.72
HDGFL3-204ENST00000563790 XYLT2Q9H1B5 865 aa10.57□□□□□ -0.72
HDGFL3-204ENST00000563790 ST6GALNAC4Q9H4F1 302 aa10.57□□□□□ -0.72
HDGFL3-204ENST00000563790 PARVGQ9HBI0 331 aa10.57□□□□□ -0.72
HDGFL3-204ENST00000563790 KCNJ16Q9NPI9 418 aa10.57□□□□□ -0.72
HDGFL3-204ENST00000563790 GOLGA8IPA6NC78 632 aa10.56□□□□□ -0.72
HDGFL3-204ENST00000563790 GOLGA8JA6NMD2 632 aa10.56□□□□□ -0.72
HDGFL3-204ENST00000563790 STX6O43752 255 aa10.56□□□□□ -0.72
HDGFL3-204ENST00000563790 KLK8O60259 260 aa10.56□□□□□ -0.72
HDGFL3-204ENST00000563790 KELP23276 732 aa10.56□□□□□ -0.72
HDGFL3-204ENST00000563790 AK4P27144 223 aaPredicted RBP10.56□□□□□ -0.72
HDGFL3-204ENST00000563790 PSMA5P28066 241 aa10.56□□□□□ -0.72
HDGFL3-204ENST00000563790 THBS2P35442 1172 aa10.56□□□□□ -0.72
HDGFL3-204ENST00000563790 SEPHS1P49903 392 aa10.56□□□□□ -0.72
HDGFL3-204ENST00000563790 GPS2Q13227 327 aa10.56□□□□□ -0.72
HDGFL3-204ENST00000563790 MTM1Q13496 603 aa10.56□□□□□ -0.72
HDGFL3-204ENST00000563790 PEX6Q13608 980 aa10.56□□□□□ -0.72
HDGFL3-204ENST00000563790 RAB41Q5JT25 222 aa10.56□□□□□ -0.72
HDGFL3-204ENST00000563790 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.56□□□□□ -0.72
HDGFL3-204ENST00000563790 SPPL2CQ8IUH8 684 aa10.56□□□□□ -0.72
HDGFL3-204ENST00000563790 TAB3Q8N5C8 712 aaPredicted RBP10.56□□□□□ -0.72
HDGFL3-204ENST00000563790 OR1N1Q8NGS0 311 aa10.56□□□□□ -0.72
HDGFL3-204ENST00000563790 PWWP2AQ96N64 755 aa10.56□□□□□ -0.72
HDGFL3-204ENST00000563790 TM6SF1Q9BZW5 370 aa10.56□□□□□ -0.72
HDGFL3-204ENST00000563790 SDCBP2Q9H190 292 aa10.56□□□□□ -0.72
HDGFL3-204ENST00000563790 WASH6PQ9NQA3 447 aa10.56□□□□□ -0.72
HDGFL3-204ENST00000563790 HMGXB4Q9UGU5 601 aa10.56□□□□□ -0.72
HDGFL3-204ENST00000563790 CDC42EP3Q9UKI2 254 aa10.56□□□□□ -0.72
HDGFL3-204ENST00000563790 LUC7L2Q9Y383 392 aaKnown RBP10.56□□□□□ -0.72
HDGFL3-204ENST00000563790 OR51B4Q9Y5P0 310 aa10.56□□□□□ -0.72
HDGFL3-204ENST00000563790 ST14Q9Y5Y6 855 aa10.56□□□□□ -0.72
HDGFL3-204ENST00000563790 PRSS38A1L453 326 aa10.55□□□□□ -0.72
HDGFL3-204ENST00000563790 C16orf96A6NNT2 1141 aa10.55□□□□□ -0.72
HDGFL3-204ENST00000563790 K7ERQ8 282 aa10.55□□□□□ -0.72
HDGFL3-204ENST00000563790 ADAM10O14672 748 aa10.55□□□□□ -0.72
HDGFL3-204ENST00000563790 CPLX1O14810 134 aa10.55□□□□□ -0.72
HDGFL3-204ENST00000563790 SMAD6O43541 496 aaKnown RBP10.55□□□□□ -0.72
HDGFL3-204ENST00000563790 CRYABP02511 175 aaKnown RBP10.55□□□□□ -0.72
HDGFL3-204ENST00000563790 CD58P19256 250 aa10.55□□□□□ -0.72
HDGFL3-204ENST00000563790 EPHA4P54764 986 aa10.55□□□□□ -0.72
HDGFL3-204ENST00000563790 GFERP55789 205 aa10.55□□□□□ -0.72
HDGFL3-204ENST00000563790 STK3Q13188 491 aa10.55□□□□□ -0.72
HDGFL3-204ENST00000563790 SURF1Q15526 300 aa10.55□□□□□ -0.72
HDGFL3-204ENST00000563790 AGAP7PQ5VUJ5 663 aa10.55□□□□□ -0.72
HDGFL3-204ENST00000563790 MSANTD2Q6P1R3 559 aa10.55□□□□□ -0.72
HDGFL3-204ENST00000563790 SLC30A9Q6PML9 568 aa10.55□□□□□ -0.72
HDGFL3-204ENST00000563790 LGI2Q8N0V4 545 aa10.55□□□□□ -0.72
HDGFL3-204ENST00000563790 CCAR2Q8N163 923 aaKnown RBP10.55□□□□□ -0.72
HDGFL3-204ENST00000563790 IGSF22Q8N9C0 903 aa10.55□□□□□ -0.72
HDGFL3-204ENST00000563790 CATSPER1Q8NEC5 780 aa10.55□□□□□ -0.72
HDGFL3-204ENST00000563790 CXorf40AQ8TE69 158 aa10.55□□□□□ -0.72
HDGFL3-204ENST00000563790 ASB5Q8WWX0 329 aa10.55□□□□□ -0.72
HDGFL3-204ENST00000563790 EDEM1Q92611 657 aa10.55□□□□□ -0.72
HDGFL3-204ENST00000563790 FUBP1Q96AE4 644 aaKnown RBP10.55□□□□□ -0.72
HDGFL3-204ENST00000563790 SH3KBP1Q96B97 665 aa10.55□□□□□ -0.72
HDGFL3-204ENST00000563790 CYFIP2Q96F07 1278 aa10.55□□□□□ -0.72
HDGFL3-204ENST00000563790 AGAP4Q96P64 663 aa10.55□□□□□ -0.72
HDGFL3-204ENST00000563790 DUSP16Q9BY84 665 aa10.55□□□□□ -0.72
HDGFL3-204ENST00000563790 UCK2Q9BZX2 261 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms