RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 SMAD6O43541 496 aaKnown RBP5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 LIASO43766 372 aa5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 OPA1O60313 960 aa5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 ZNF821O75541 412 aaPredicted RBP5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 TMCC1O94876 653 aa5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 TJP3O95049 919 aa5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 TUBB4AP04350 444 aa5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 EPHX1P07099 455 aa5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 DLDP09622 509 aaKnown RBP5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 CD8BP10966 210 aa5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 SRCP12931 536 aa5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 HNRNPLP14866 589 aaKnown RBP eCLIP5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 POLR2EP19388 210 aaKnown RBP5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 PRKCHP24723 683 aa5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 CD96P40200 585 aa5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 TNFRSF4P43489 277 aa5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 RGRP47804 291 aa5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 NR2C2P49116 596 aa5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 SERPINH1P50454 418 aaKnown RBP5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 ECT2LQ008S8 904 aa5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 IL10RBQ08334 325 aa5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 PPIDQ08752 370 aaKnown RBP5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 SIGLEC14Q08ET2 396 aa5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 GRSF1Q12849 480 aaKnown RBP eCLIP5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 ZBTB17Q13105 803 aa5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 XRCC4Q13426 336 aa5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 ENPP2Q13822 863 aa5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 ZNF234Q14588 700 aa5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 ZNF460Q14592 562 aa5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 CYTH1Q15438 398 aa5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 OASLQ15646 514 aaKnown RBP5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 SLC45A4Q5BKX6 768 aa5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 CWF19L1Q69YN2 538 aaKnown RBP5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 IL31Q6EBC2 164 aa5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 TTC27Q6P3X3 843 aa5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 LINGO4Q6UY18 593 aa5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 ZNF852Q6ZMS4 543 aa5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 LEKR1Q6ZMV7 388 aa5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 Q6ZS52 159 aa5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 UBE2R2Q712K3 238 aaPredicted RBP5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 MAMDC2Q7Z304 686 aaPredicted RBP5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 FGD2Q7Z6J4 655 aa5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 LRRC49Q8IUZ0 686 aa5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 CCDC117Q8IWD4 279 aaPredicted RBP5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 CCDC13Q8IYE1 715 aa5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 CCDC105Q8IYK2 499 aa5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 SH2D3CQ8N5H7 860 aa5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 ATPAF2Q8N5M1 289 aa5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 TEX26Q8N6G2 289 aa5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 FRS2Q8WU20 508 aa5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 C1orf54Q8WWF1 131 aa5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 P3H4Q92791 437 aa5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 PTPRN2Q92932 1015 aa5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 FATE1Q969F0 183 aa5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 NKD2Q969F2 451 aaPredicted RBP5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 UBE2FQ969M7 185 aa5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 VOPP1Q96AW1 172 aa5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 CAPZA3Q96KX2 299 aa5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 RPL10LQ96L21 214 aaKnown RBP5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 NSMCE3Q96MG7 304 aa5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 ACOX2Q99424 681 aa5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 LGMNQ99538 433 aa5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 IL12RB2Q99665 862 aa5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 ELAC2Q9BQ52 826 aaKnown RBP5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 CIPCQ9C0C6 399 aa5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 USP29Q9HBJ7 922 aa5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 CD248Q9HCU0 757 aa5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 ZDHHC4Q9NPG8 344 aa5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 THAP10Q9P2Z0 257 aaPredicted RBP5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 LHX3Q9UBR4 397 aa5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 UBA2Q9UBT2 640 aaPredicted RBP5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 NDOR1Q9UHB4 597 aa5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 SLCO3A1Q9UIG8 710 aa5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 FBXL21Q9UKT6 434 aa5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 DNPEPQ9ULA0 475 aa5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 NDRG2Q9UN36 371 aaKnown RBP5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 ERVW-1Q9UQF0 538 aa5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 HS3ST2Q9Y278 367 aa5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 TCF20Q9UGU0 1960 aaKnown RBP5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 TICRRQ7Z2Z1 1910 aa5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 MUC22E2RYF6 1773 aaPredicted RBP5.27□□□□□ -1.57
HERPUD1-207ENST00000563781 KIAA1549LQ6ZVL6 1849 aa5.26□□□□□ -1.57
HERPUD1-207ENST00000563781 BCLAF3A2AJT9 711 aaKnown RBP5.26□□□□□ -1.57
HERPUD1-207ENST00000563781 TMEM221A6NGB7 291 aa5.26□□□□□ -1.57
HERPUD1-207ENST00000563781 ZSCAN5CA6NGD5 496 aaPredicted RBP5.26□□□□□ -1.57
HERPUD1-207ENST00000563781 TTC34A8MYJ7 566 aa5.26□□□□□ -1.57
HERPUD1-207ENST00000563781 WASH3PC4AMC7 463 aa5.26□□□□□ -1.57
HERPUD1-207ENST00000563781 H7C0C1 242 aa5.26□□□□□ -1.57
HERPUD1-207ENST00000563781 M0R296 226 aa5.26□□□□□ -1.57
HERPUD1-207ENST00000563781 SGK1O00141 431 aa5.26□□□□□ -1.57
HERPUD1-207ENST00000563781 KCNK1O00180 336 aa5.26□□□□□ -1.57
HERPUD1-207ENST00000563781 CBX4O00257 560 aa5.26□□□□□ -1.57
HERPUD1-207ENST00000563781 MCF2LO15068 1137 aa5.26□□□□□ -1.57
HERPUD1-207ENST00000563781 MUSKO15146 869 aa5.26□□□□□ -1.57
HERPUD1-207ENST00000563781 NCAM2O15394 837 aa5.26□□□□□ -1.57
HERPUD1-207ENST00000563781 TIMM44O43615 452 aa5.26□□□□□ -1.57
HERPUD1-207ENST00000563781 URI1O94763 535 aaPredicted RBP5.26□□□□□ -1.57
HERPUD1-207ENST00000563781 PRKD3O94806 890 aa5.26□□□□□ -1.57
HERPUD1-207ENST00000563781 SRPRAP08240 638 aaKnown RBP5.26□□□□□ -1.57
HERPUD1-207ENST00000563781 JMJD7P0C870 316 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms