RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 RFLNAQ6ZTI6 216 aa10.35□□□□□ -0.75
SF3B3-204ENST00000563739 DNAAF5Q86Y56 855 aa10.35□□□□□ -0.75
SF3B3-204ENST00000563739 TICAM1Q8IUC6 712 aa10.35□□□□□ -0.75
SF3B3-204ENST00000563739 ARHGAP12Q8IWW6 846 aa10.35□□□□□ -0.75
SF3B3-204ENST00000563739 TP53INP2Q8IXH6 220 aa10.35□□□□□ -0.75
SF3B3-204ENST00000563739 UMODL1-AS1Q8N2C9 162 aa10.35□□□□□ -0.75
SF3B3-204ENST00000563739 TSEN2Q8NCE0 465 aaKnown RBP10.35□□□□□ -0.75
SF3B3-204ENST00000563739 ATL2Q8NHH9 583 aa10.35□□□□□ -0.75
SF3B3-204ENST00000563739 SLC37A2Q8TED4 501 aa10.35□□□□□ -0.75
SF3B3-204ENST00000563739 FNIP1Q8TF40 1166 aa10.35□□□□□ -0.75
SF3B3-204ENST00000563739 CPA5Q8WXQ8 436 aa10.35□□□□□ -0.75
SF3B3-204ENST00000563739 TRIM55Q9BYV6 548 aa10.35□□□□□ -0.75
SF3B3-204ENST00000563739 TRNAU1APQ9NX07 287 aaKnown RBP10.35□□□□□ -0.75
SF3B3-204ENST00000563739 SLC17A4Q9Y2C5 497 aa10.35□□□□□ -0.75
SF3B3-204ENST00000563739 NF1P21359 2839 aa10.34□□□□□ -0.75
SF3B3-204ENST00000563739 DNHD1Q96M86 4753 aa10.34□□□□□ -0.75
SF3B3-204ENST00000563739 TTC24A2A3L6 582 aaPredicted RBP10.34□□□□□ -0.75
SF3B3-204ENST00000563739 A6NCN8 305 aa10.34□□□□□ -0.75
SF3B3-204ENST00000563739 RHPN2P1A8MT19 583 aa10.34□□□□□ -0.75
SF3B3-204ENST00000563739 A8MX80 341 aa10.34□□□□□ -0.75
SF3B3-204ENST00000563739 HAX1O00165 279 aa10.34□□□□□ -0.75
SF3B3-204ENST00000563739 CAPN5O15484 640 aaPredicted RBP10.34□□□□□ -0.75
SF3B3-204ENST00000563739 PRAMEF11O60813 436 aa10.34□□□□□ -0.75
SF3B3-204ENST00000563739 DNAJB5O75953 348 aa10.34□□□□□ -0.75
SF3B3-204ENST00000563739 CYP1A1P04798 512 aaPredicted RBP10.34□□□□□ -0.75
SF3B3-204ENST00000563739 IVLP07476 585 aa10.34□□□□□ -0.75
SF3B3-204ENST00000563739 MMP8P22894 467 aa10.34□□□□□ -0.75
SF3B3-204ENST00000563739 GNPDA1P46926 289 aa10.34□□□□□ -0.75
SF3B3-204ENST00000563739 FASLGP48023 281 aa10.34□□□□□ -0.75
SF3B3-204ENST00000563739 RAB15P59190 212 aa10.34□□□□□ -0.75
SF3B3-204ENST00000563739 CDK3Q00526 305 aa10.34□□□□□ -0.75
SF3B3-204ENST00000563739 FMO1Q01740 532 aa10.34□□□□□ -0.75
SF3B3-204ENST00000563739 STIM1Q13586 685 aa10.34□□□□□ -0.75
SF3B3-204ENST00000563739 LAMB3Q13751 1172 aa10.34□□□□□ -0.75
SF3B3-204ENST00000563739 DCAF12Q5T6F0 453 aa10.34□□□□□ -0.75
SF3B3-204ENST00000563739 ARHGAP36Q6ZRI8 547 aa10.34□□□□□ -0.75
SF3B3-204ENST00000563739 STRADAQ7RTN6 431 aa10.34□□□□□ -0.75
SF3B3-204ENST00000563739 HSD11B1LQ7Z5J1 315 aa10.34□□□□□ -0.75
SF3B3-204ENST00000563739 FAM129CQ86XR2 697 aa10.34□□□□□ -0.75
SF3B3-204ENST00000563739 ELOA2Q8IYF1 753 aaPredicted RBP10.34□□□□□ -0.75
SF3B3-204ENST00000563739 GALNT11Q8NCW6 608 aa10.34□□□□□ -0.75
SF3B3-204ENST00000563739 SSC4DQ8WTU2 575 aa10.34□□□□□ -0.75
SF3B3-204ENST00000563739 FAM172AQ8WUF8 416 aa10.34□□□□□ -0.75
SF3B3-204ENST00000563739 TCTN2Q96GX1 697 aa10.34□□□□□ -0.75
SF3B3-204ENST00000563739 ZNF641Q96N77 438 aaPredicted RBP10.34□□□□□ -0.75
SF3B3-204ENST00000563739 SMIM14Q96QK8 99 aa10.34□□□□□ -0.75
SF3B3-204ENST00000563739 RUFY1Q96T51 708 aa10.34□□□□□ -0.75
SF3B3-204ENST00000563739 F8P00451 2351 aa10.34□□□□□ -0.75
SF3B3-204ENST00000563739 BICDL2A1A5D9 508 aa10.33□□□□□ -0.76
SF3B3-204ENST00000563739 WIPF3A6NGB9 483 aa10.33□□□□□ -0.76
SF3B3-204ENST00000563739 TEX33O43247 280 aa10.33□□□□□ -0.76
SF3B3-204ENST00000563739 CCP110O43303 1012 aa10.33□□□□□ -0.76
SF3B3-204ENST00000563739 AGFG2O95081 481 aa10.33□□□□□ -0.76
SF3B3-204ENST00000563739 LSM8O95777 96 aaKnown RBP10.33□□□□□ -0.76
SF3B3-204ENST00000563739 ELFN1P0C7U0 828 aa10.33□□□□□ -0.76
SF3B3-204ENST00000563739 MAP4P27816 1152 aaKnown RBP10.33□□□□□ -0.76
SF3B3-204ENST00000563739 CSTF2P33240 577 aaKnown RBP eCLIP10.33□□□□□ -0.76
SF3B3-204ENST00000563739 PPP1R2P41236 205 aa10.33□□□□□ -0.76
SF3B3-204ENST00000563739 CSNK1DP48730 415 aa10.33□□□□□ -0.76
SF3B3-204ENST00000563739 YBEYP58557 167 aaPredicted RBP10.33□□□□□ -0.76
SF3B3-204ENST00000563739 RAD51Q06609 339 aa10.33□□□□□ -0.76
SF3B3-204ENST00000563739 ERAP2Q6P179 960 aa10.33□□□□□ -0.76
SF3B3-204ENST00000563739 C16orf46Q6P387 395 aa10.33□□□□□ -0.76
SF3B3-204ENST00000563739 SRLQ86TD4 932 aa10.33□□□□□ -0.76
SF3B3-204ENST00000563739 TRIM74Q86UV6 250 aa10.33□□□□□ -0.76
SF3B3-204ENST00000563739 SFRP1Q8N474 314 aa10.33□□□□□ -0.76
SF3B3-204ENST00000563739 NPWQ8N729 165 aa10.33□□□□□ -0.76
SF3B3-204ENST00000563739 Q8NA96 180 aa10.33□□□□□ -0.76
SF3B3-204ENST00000563739 DTD2Q96FN9 168 aa10.33□□□□□ -0.76
SF3B3-204ENST00000563739 FAM81BQ96LP2 452 aa10.33□□□□□ -0.76
SF3B3-204ENST00000563739 TUBGCP5Q96RT8 1024 aa10.33□□□□□ -0.76
SF3B3-204ENST00000563739 PCDHB18PQ96TA0 734 aa10.33□□□□□ -0.76
SF3B3-204ENST00000563739 GSDMCQ9BYG8 508 aa10.33□□□□□ -0.76
SF3B3-204ENST00000563739 ASPSCR1Q9BZE9 553 aa10.33□□□□□ -0.76
SF3B3-204ENST00000563739 FBXO8Q9NRD0 319 aa10.33□□□□□ -0.76
SF3B3-204ENST00000563739 OGFRQ9NZT2 677 aa10.33□□□□□ -0.76
SF3B3-204ENST00000563739 UBA2Q9UBT2 640 aaPredicted RBP10.33□□□□□ -0.76
SF3B3-204ENST00000563739 MOSPD1Q9UJG1 213 aa10.33□□□□□ -0.76
SF3B3-204ENST00000563739 TLK1Q9UKI8 766 aa10.33□□□□□ -0.76
SF3B3-204ENST00000563739 HPCAL4Q9UM19 191 aa10.33□□□□□ -0.76
SF3B3-204ENST00000563739 MAP4K5Q9Y4K4 846 aa10.33□□□□□ -0.76
SF3B3-204ENST00000563739 MN1Q10571 1320 aaPredicted RBP10.33□□□□□ -0.76
SF3B3-204ENST00000563739 A8MU76 341 aa10.32□□□□□ -0.76
SF3B3-204ENST00000563739 HTRA2O43464 458 aaPredicted RBP10.32□□□□□ -0.76
SF3B3-204ENST00000563739 HEXIM1O94992 359 aaKnown RBP10.32□□□□□ -0.76
SF3B3-204ENST00000563739 MAP3K6O95382 1288 aa10.32□□□□□ -0.76
SF3B3-204ENST00000563739 PEX11BO96011 259 aa10.32□□□□□ -0.76
SF3B3-204ENST00000563739 TCN2P20062 427 aa10.32□□□□□ -0.76
SF3B3-204ENST00000563739 XPAP23025 273 aaPredicted RBP10.32□□□□□ -0.76
SF3B3-204ENST00000563739 KELP23276 732 aa10.32□□□□□ -0.76
SF3B3-204ENST00000563739 EPHB2P29323 1055 aa10.32□□□□□ -0.76
SF3B3-204ENST00000563739 RFC1P35251 1148 aaPredicted RBP10.32□□□□□ -0.76
SF3B3-204ENST00000563739 ETV3P41162 512 aa10.32□□□□□ -0.76
SF3B3-204ENST00000563739 PMS2P54278 862 aa10.32□□□□□ -0.76
SF3B3-204ENST00000563739 GFERP55789 205 aa10.32□□□□□ -0.76
SF3B3-204ENST00000563739 GSCP56915 257 aaPredicted RBP10.32□□□□□ -0.76
SF3B3-204ENST00000563739 OGDHQ02218 1023 aa10.32□□□□□ -0.76
SF3B3-204ENST00000563739 ILF3Q12906 894 aaKnown RBP eCLIP10.32□□□□□ -0.76
SF3B3-204ENST00000563739 MAP7Q14244 749 aa10.32□□□□□ -0.76
SF3B3-204ENST00000563739 IHHQ14623 411 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms