RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 CROCCP3Q8IVE0 287 aa11.82□□□□□ -0.52
ABCA3-203ENST00000563623 SLC15A3Q8IY34 581 aa11.82□□□□□ -0.52
ABCA3-203ENST00000563623 CMTR2Q8IYT2 770 aaKnown RBP11.82□□□□□ -0.52
ABCA3-203ENST00000563623 ANKRD13AQ8IZ07 590 aa11.82□□□□□ -0.52
ABCA3-203ENST00000563623 LINC01465Q8N7H1 131 aa11.82□□□□□ -0.52
ABCA3-203ENST00000563623 GPRC5AQ8NFJ5 357 aa11.82□□□□□ -0.52
ABCA3-203ENST00000563623 TFAP2CQ92754 450 aa11.82□□□□□ -0.52
ABCA3-203ENST00000563623 MYLPFQ96A32 169 aa11.82□□□□□ -0.52
ABCA3-203ENST00000563623 FCRL5Q96RD9 977 aa11.82□□□□□ -0.52
ABCA3-203ENST00000563623 RANBP9Q96S59 729 aa11.82□□□□□ -0.52
ABCA3-203ENST00000563623 ANKRD60Q9BZ19 345 aa11.82□□□□□ -0.52
ABCA3-203ENST00000563623 ARMC7Q9H6L4 198 aa11.82□□□□□ -0.52
ABCA3-203ENST00000563623 MRGBPQ9NV56 204 aa11.82□□□□□ -0.52
ABCA3-203ENST00000563623 SIP14410 1827 aa11.82□□□□□ -0.52
ABCA3-203ENST00000563623 RLFQ13129 1914 aa11.82□□□□□ -0.52
ABCA3-203ENST00000563623 A0A0G2JLL6 359 aaPredicted RBP11.81□□□□□ -0.52
ABCA3-203ENST00000563623 UBFD1O14562 309 aaKnown RBP11.81□□□□□ -0.52
ABCA3-203ENST00000563623 GNGT2O14610 69 aa11.81□□□□□ -0.52
ABCA3-203ENST00000563623 B3GAT3O94766 335 aa11.81□□□□□ -0.52
ABCA3-203ENST00000563623 MMP3P08254 477 aa11.81□□□□□ -0.52
ABCA3-203ENST00000563623 ALDOCP09972 364 aaKnown RBP11.81□□□□□ -0.52
ABCA3-203ENST00000563623 CAPN3P20807 821 aa11.81□□□□□ -0.52
ABCA3-203ENST00000563623 DNAJB2P25686 324 aa11.81□□□□□ -0.52
ABCA3-203ENST00000563623 ARCN1P48444 511 aaKnown RBP11.81□□□□□ -0.52
ABCA3-203ENST00000563623 APLP1P51693 650 aa11.81□□□□□ -0.52
ABCA3-203ENST00000563623 PFKPQ01813 784 aa11.81□□□□□ -0.52
ABCA3-203ENST00000563623 DSC2Q02487 901 aa11.81□□□□□ -0.52
ABCA3-203ENST00000563623 ITGADQ13349 1161 aa11.81□□□□□ -0.52
ABCA3-203ENST00000563623 PPIL2Q13356 520 aa11.81□□□□□ -0.52
ABCA3-203ENST00000563623 TIGD2Q4W5G0 525 aa11.81□□□□□ -0.52
ABCA3-203ENST00000563623 INTS6LQ5JSJ4 861 aaKnown RBP11.81□□□□□ -0.52
ABCA3-203ENST00000563623 PRRT2Q7Z6L0 340 aaPredicted RBP11.81□□□□□ -0.52
ABCA3-203ENST00000563623 STK32CQ86UX6 486 aa11.81□□□□□ -0.52
ABCA3-203ENST00000563623 KCTD13Q8WZ19 329 aa11.81□□□□□ -0.52
ABCA3-203ENST00000563623 TBATAQ96M53 351 aa11.81□□□□□ -0.52
ABCA3-203ENST00000563623 HBEGFQ99075 208 aa11.81□□□□□ -0.52
ABCA3-203ENST00000563623 ADAMTS10Q9H324 1103 aa11.81□□□□□ -0.52
ABCA3-203ENST00000563623 SELENONQ9NZV5 590 aa11.81□□□□□ -0.52
ABCA3-203ENST00000563623 ANAPC2Q9UJX6 822 aa11.81□□□□□ -0.52
ABCA3-203ENST00000563623 GMEB1Q9Y692 573 aa11.81□□□□□ -0.52
ABCA3-203ENST00000563623 ZBBXA8MT70 800 aa11.81□□□□□ -0.52
ABCA3-203ENST00000563623 FZD9O00144 591 aa11.81□□□□□ -0.52
ABCA3-203ENST00000563623 TREHO43280 583 aa11.81□□□□□ -0.52
ABCA3-203ENST00000563623 TSPAN3O60637 253 aa11.81□□□□□ -0.52
ABCA3-203ENST00000563623 SNAP29O95721 258 aa11.81□□□□□ -0.52
ABCA3-203ENST00000563623 ZNF182P17025 639 aaPredicted RBP11.81□□□□□ -0.52
ABCA3-203ENST00000563623 LBPP18428 481 aa11.81□□□□□ -0.52
ABCA3-203ENST00000563623 UGT1A1P22309 533 aa11.81□□□□□ -0.52
ABCA3-203ENST00000563623 UGT1A4P22310 534 aa11.81□□□□□ -0.52
ABCA3-203ENST00000563623 CCNCP24863 283 aa11.81□□□□□ -0.52
ABCA3-203ENST00000563623 UGT1A3P35503 534 aa11.81□□□□□ -0.52
ABCA3-203ENST00000563623 UGT1A5P35504 534 aa11.81□□□□□ -0.52
ABCA3-203ENST00000563623 GRIK1P39086 918 aa11.81□□□□□ -0.52
ABCA3-203ENST00000563623 CLCNKBP51801 687 aa11.81□□□□□ -0.52
ABCA3-203ENST00000563623 AFF1P51825 1210 aaKnown RBP11.81□□□□□ -0.52
ABCA3-203ENST00000563623 DIO3P55073 304 aa11.81□□□□□ -0.52
ABCA3-203ENST00000563623 CDKN2DP55273 166 aa11.81□□□□□ -0.52
ABCA3-203ENST00000563623 FOXA1P55317 472 aa11.81□□□□□ -0.52
ABCA3-203ENST00000563623 NHSL2Q5HYW2 709 aa11.81□□□□□ -0.52
ABCA3-203ENST00000563623 THOC7Q6I9Y2 204 aaKnown RBP11.81□□□□□ -0.52
ABCA3-203ENST00000563623 KIAA0930Q6ICG6 404 aaPredicted RBP11.81□□□□□ -0.52
ABCA3-203ENST00000563623 FUNDC1Q8IVP5 155 aa11.81□□□□□ -0.52
ABCA3-203ENST00000563623 SMYD1Q8NB12 490 aa11.81□□□□□ -0.52
ABCA3-203ENST00000563623 ZMIZ2Q8NF64 920 aa11.81□□□□□ -0.52
ABCA3-203ENST00000563623 CASP10Q92851 521 aa11.81□□□□□ -0.52
ABCA3-203ENST00000563623 CDCA5Q96FF9 252 aa11.81□□□□□ -0.52
ABCA3-203ENST00000563623 SMARCD1Q96GM5 515 aa11.81□□□□□ -0.52
ABCA3-203ENST00000563623 CENPNQ96H22 339 aaPredicted RBP11.81□□□□□ -0.52
ABCA3-203ENST00000563623 PRKD2Q9BZL6 878 aa11.81□□□□□ -0.52
ABCA3-203ENST00000563623 VTA1Q9NP79 307 aa11.81□□□□□ -0.52
ABCA3-203ENST00000563623 TMEM181Q9P2C4 612 aa11.81□□□□□ -0.52
ABCA3-203ENST00000563623 MARCH4Q9P2E8 410 aaPredicted RBP11.81□□□□□ -0.52
ABCA3-203ENST00000563623 CPA4Q9UI42 421 aa11.81□□□□□ -0.52
ABCA3-203ENST00000563623 TMEM98Q9Y2Y6 226 aa11.81□□□□□ -0.52
ABCA3-203ENST00000563623 B4GAT1O43505 415 aa11.81□□□□□ -0.52
ABCA3-203ENST00000563623 KCNH1O95259 989 aa11.81□□□□□ -0.52
ABCA3-203ENST00000563623 IMPDH1P20839 514 aa11.81□□□□□ -0.52
ABCA3-203ENST00000563623 HCAR3P49019 387 aa11.81□□□□□ -0.52
ABCA3-203ENST00000563623 DNAJB13P59910 316 aa11.81□□□□□ -0.52
ABCA3-203ENST00000563623 TUBA4AP68366 448 aa11.81□□□□□ -0.52
ABCA3-203ENST00000563623 GNA12Q03113 381 aa11.81□□□□□ -0.52
ABCA3-203ENST00000563623 MAMDC4Q6UXC1 1216 aa11.81□□□□□ -0.52
ABCA3-203ENST00000563623 TOP1MTQ969P6 601 aa11.81□□□□□ -0.52
ABCA3-203ENST00000563623 MAELQ96JY0 434 aaKnown RBP11.81□□□□□ -0.52
ABCA3-203ENST00000563623 CAMKK2Q96RR4 588 aa11.81□□□□□ -0.52
ABCA3-203ENST00000563623 CCM2LQ9NUG4 571 aaPredicted RBP11.81□□□□□ -0.52
ABCA3-203ENST00000563623 RNF112Q9ULX5 631 aa11.81□□□□□ -0.52
ABCA3-203ENST00000563623 TMEM247A6NEH6 219 aa11.8□□□□□ -0.52
ABCA3-203ENST00000563623 MATN3O15232 486 aa11.8□□□□□ -0.52
ABCA3-203ENST00000563623 RHOBTB1O94844 696 aa11.8□□□□□ -0.52
ABCA3-203ENST00000563623 ARSDP51689 593 aa11.8□□□□□ -0.52
ABCA3-203ENST00000563623 AIF1P55008 147 aa11.8□□□□□ -0.52
ABCA3-203ENST00000563623 SH3BP2P78314 561 aa11.8□□□□□ -0.52
ABCA3-203ENST00000563623 LIPEQ05469 1076 aa11.8□□□□□ -0.52
ABCA3-203ENST00000563623 SEMA3BQ13214 749 aa11.8□□□□□ -0.52
ABCA3-203ENST00000563623 RAB39AQ14964 217 aa11.8□□□□□ -0.52
ABCA3-203ENST00000563623 ACAP2Q15057 778 aa11.8□□□□□ -0.52
ABCA3-203ENST00000563623 SDHAF4Q5VUM1 108 aa11.8□□□□□ -0.52
ABCA3-203ENST00000563623 DENND5AQ6IQ26 1287 aa11.8□□□□□ -0.52
ABCA3-203ENST00000563623 GPR180Q86V85 440 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms