RNA–Protein interactions for RNA: ENST00000563492.1

CDH11-208, Transcript of cadherin 11, humanhuman

TSL 5

Gene CDH11, Length 468 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-208ENST00000563492 CCDC81Q6ZN84 652 aa6.9□□□□□ -1.3
CDH11-208ENST00000563492 MARK2Q7KZI7 788 aaKnown RBP6.9□□□□□ -1.3
CDH11-208ENST00000563492 TECPR1Q7Z6L1 1165 aa6.9□□□□□ -1.3
CDH11-208ENST00000563492 LUZP1Q86V48 1076 aa6.9□□□□□ -1.3
CDH11-208ENST00000563492 C17orf82Q86X59 251 aaPredicted RBP6.9□□□□□ -1.3
CDH11-208ENST00000563492 ZNF761Q86XN6 746 aaPredicted RBP6.9□□□□□ -1.3
CDH11-208ENST00000563492 PSTKQ8IV42 348 aaKnown RBP6.9□□□□□ -1.3
CDH11-208ENST00000563492 SLITRK4Q8IW52 837 aa6.9□□□□□ -1.3
CDH11-208ENST00000563492 LSM14AQ8ND56 463 aaKnown RBP6.9□□□□□ -1.3
CDH11-208ENST00000563492 RCBTB1Q8NDN9 531 aa6.9□□□□□ -1.3
CDH11-208ENST00000563492 GPBAR1Q8TDU6 330 aa6.9□□□□□ -1.3
CDH11-208ENST00000563492 SNRNP27Q8WVK2 155 aaKnown RBP6.9□□□□□ -1.3
CDH11-208ENST00000563492 PIH1D2Q8WWB5 315 aa6.9□□□□□ -1.3
CDH11-208ENST00000563492 USP7Q93009 1102 aa6.9□□□□□ -1.3
CDH11-208ENST00000563492 GRAMD1AQ96CP6 724 aa6.9□□□□□ -1.3
CDH11-208ENST00000563492 NUS1Q96E22 293 aa6.9□□□□□ -1.3
CDH11-208ENST00000563492 DTD2Q96FN9 168 aa6.9□□□□□ -1.3
CDH11-208ENST00000563492 NUDCD1Q96RS6 583 aa6.9□□□□□ -1.3
CDH11-208ENST00000563492 CCNL2Q96S94 520 aaPredicted RBP6.9□□□□□ -1.3
CDH11-208ENST00000563492 EIF3CQ99613 913 aaKnown RBP6.9□□□□□ -1.3
CDH11-208ENST00000563492 MGME1Q9BQP7 344 aa6.9□□□□□ -1.3
CDH11-208ENST00000563492 BPIFA3Q9BQP9 254 aa6.9□□□□□ -1.3
CDH11-208ENST00000563492 FUCA2Q9BTY2 467 aa6.9□□□□□ -1.3
CDH11-208ENST00000563492 TEX101Q9BY14 249 aa6.9□□□□□ -1.3
CDH11-208ENST00000563492 FRMD8Q9BZ67 464 aaPredicted RBP6.9□□□□□ -1.3
CDH11-208ENST00000563492 ABCG8Q9H221 673 aa6.9□□□□□ -1.3
CDH11-208ENST00000563492 CBX8Q9HC52 389 aa6.9□□□□□ -1.3
CDH11-208ENST00000563492 NT5MQ9NPB1 228 aa6.9□□□□□ -1.3
CDH11-208ENST00000563492 GOLGA6AQ9NYA3 693 aa6.9□□□□□ -1.3
CDH11-208ENST00000563492 DONSONQ9NYP3 566 aa6.9□□□□□ -1.3
CDH11-208ENST00000563492 TMEM9Q9P0T7 183 aa6.9□□□□□ -1.3
CDH11-208ENST00000563492 TAAR2Q9P1P5 351 aa6.9□□□□□ -1.3
CDH11-208ENST00000563492 APPL1Q9UKG1 709 aa6.9□□□□□ -1.3
CDH11-208ENST00000563492 SUFUQ9UMX1 484 aa6.9□□□□□ -1.3
CDH11-208ENST00000563492 PRKAB1Q9Y478 270 aa6.9□□□□□ -1.3
CDH11-208ENST00000563492 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.89□□□□□ -1.31
CDH11-208ENST00000563492 CYSRT1A8MQ03 144 aa6.89□□□□□ -1.31
CDH11-208ENST00000563492 SMTNL1A8MU46 457 aa6.89□□□□□ -1.31
CDH11-208ENST00000563492 INPP4BO15327 924 aa6.89□□□□□ -1.31
CDH11-208ENST00000563492 MFSD11O43934 449 aa6.89□□□□□ -1.31
CDH11-208ENST00000563492 MBD3O95983 291 aa6.89□□□□□ -1.31
CDH11-208ENST00000563492 SERPINC1P01008 464 aa6.89□□□□□ -1.31
CDH11-208ENST00000563492 PRLP01236 227 aa6.89□□□□□ -1.31
CDH11-208ENST00000563492 CYP1A2P05177 515 aa6.89□□□□□ -1.31
CDH11-208ENST00000563492 JMJD7P0C870 316 aa6.89□□□□□ -1.31
CDH11-208ENST00000563492 MYCLP1P12525 358 aaPredicted RBP6.89□□□□□ -1.31
CDH11-208ENST00000563492 DESP17661 470 aa6.89□□□□□ -1.31
CDH11-208ENST00000563492 CD1CP29017 333 aa6.89□□□□□ -1.31
CDH11-208ENST00000563492 GJC1P36383 396 aa6.89□□□□□ -1.31
CDH11-208ENST00000563492 ADCY8P40145 1251 aa6.89□□□□□ -1.31
CDH11-208ENST00000563492 PBX1P40424 430 aa6.89□□□□□ -1.31
CDH11-208ENST00000563492 ARL4AP40617 200 aa6.89□□□□□ -1.31
CDH11-208ENST00000563492 SSR1P43307 286 aaKnown RBP6.89□□□□□ -1.31
CDH11-208ENST00000563492 MMP13P45452 471 aa6.89□□□□□ -1.31
CDH11-208ENST00000563492 RENBPP51606 427 aa6.89□□□□□ -1.31
CDH11-208ENST00000563492 ARSEP51690 589 aa6.89□□□□□ -1.31
CDH11-208ENST00000563492 UCNP55089 124 aa6.89□□□□□ -1.31
CDH11-208ENST00000563492 CDH6P55285 790 aa6.89□□□□□ -1.31
CDH11-208ENST00000563492 CDK3Q00526 305 aa6.89□□□□□ -1.31
CDH11-208ENST00000563492 NFKB2Q00653 900 aa6.89□□□□□ -1.31
CDH11-208ENST00000563492 PTSQ03393 145 aa6.89□□□□□ -1.31
CDH11-208ENST00000563492 ITKQ08881 620 aa6.89□□□□□ -1.31
CDH11-208ENST00000563492 NIPAL4Q0D2K0 466 aa6.89□□□□□ -1.31
CDH11-208ENST00000563492 SLC10A2Q12908 348 aaPredicted RBP6.89□□□□□ -1.31
CDH11-208ENST00000563492 ARHGEF7Q14155 803 aa6.89□□□□□ -1.31
CDH11-208ENST00000563492 NFKBIBQ15653 356 aa6.89□□□□□ -1.31
CDH11-208ENST00000563492 FILIP1LQ4L180 1135 aa6.89□□□□□ -1.31
CDH11-208ENST00000563492 BOLA3Q53S33 107 aa6.89□□□□□ -1.31
CDH11-208ENST00000563492 TDRD12Q587J7 1177 aaKnown RBP6.89□□□□□ -1.31
CDH11-208ENST00000563492 MARC1Q5VT66 337 aa6.89□□□□□ -1.31
CDH11-208ENST00000563492 LRRC66Q68CR7 880 aa6.89□□□□□ -1.31
CDH11-208ENST00000563492 RAET1GQ6H3X3 334 aa6.89□□□□□ -1.31
CDH11-208ENST00000563492 B4GALNT4Q76KP1 1039 aa6.89□□□□□ -1.31
CDH11-208ENST00000563492 NAGSQ8N159 534 aa6.89□□□□□ -1.31
CDH11-208ENST00000563492 ATPAF2Q8N5M1 289 aa6.89□□□□□ -1.31
CDH11-208ENST00000563492 LZTR1Q8N653 840 aa6.89□□□□□ -1.31
CDH11-208ENST00000563492 ATL2Q8NHH9 583 aa6.89□□□□□ -1.31
CDH11-208ENST00000563492 WDR48Q8TAF3 677 aa6.89□□□□□ -1.31
CDH11-208ENST00000563492 ARRDC2Q8TBH0 407 aa6.89□□□□□ -1.31
CDH11-208ENST00000563492 ZDHHC1Q8WTX9 485 aa6.89□□□□□ -1.31
CDH11-208ENST00000563492 SPOCK2Q92563 424 aa6.89□□□□□ -1.31
CDH11-208ENST00000563492 EXTL1Q92935 676 aa6.89□□□□□ -1.31
CDH11-208ENST00000563492 RNF31Q96EP0 1072 aa6.89□□□□□ -1.31
CDH11-208ENST00000563492 SCRN2Q96FV2 425 aa6.89□□□□□ -1.31
CDH11-208ENST00000563492 TMEM74Q96NL1 305 aa6.89□□□□□ -1.31
CDH11-208ENST00000563492 ZNF599Q96NL3 588 aa6.89□□□□□ -1.31
CDH11-208ENST00000563492 MCCC1Q96RQ3 725 aaPredicted RBP6.89□□□□□ -1.31
CDH11-208ENST00000563492 WDR24Q96S15 920 aa6.89□□□□□ -1.31
CDH11-208ENST00000563492 SEMA3CQ99985 751 aa6.89□□□□□ -1.31
CDH11-208ENST00000563492 RIOK2Q9BVS4 552 aaKnown RBP6.89□□□□□ -1.31
CDH11-208ENST00000563492 NUP85Q9BW27 656 aa6.89□□□□□ -1.31
CDH11-208ENST00000563492 PACSIN1Q9BY11 444 aa6.89□□□□□ -1.31
CDH11-208ENST00000563492 STRADBQ9C0K7 418 aa6.89□□□□□ -1.31
CDH11-208ENST00000563492 NAT10Q9H0A0 1025 aaKnown RBP6.89□□□□□ -1.31
CDH11-208ENST00000563492 MRPL47Q9HD33 250 aaKnown RBP6.89□□□□□ -1.31
CDH11-208ENST00000563492 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.89□□□□□ -1.31
CDH11-208ENST00000563492 ANAPC7Q9UJX3 599 aa6.89□□□□□ -1.31
CDH11-208ENST00000563492 PHTF1Q9UMS5 762 aa6.89□□□□□ -1.31
CDH11-208ENST00000563492 CHKBQ9Y259 395 aa6.89□□□□□ -1.31
CDH11-208ENST00000563492 PCDHGA7Q9Y5G6 932 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms