RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 CCDC88CQ9P219 2028 aa7.71□□□□□ -1.18
HERPUD1-206ENST00000563343 PCM1Q15154 2024 aa7.7□□□□□ -1.18
HERPUD1-206ENST00000563343 FAM237AA0A1B0GTK4 181 aa7.7□□□□□ -1.18
HERPUD1-206ENST00000563343 INPP4BO15327 924 aa7.7□□□□□ -1.18
HERPUD1-206ENST00000563343 P4HA2O15460 535 aa7.7□□□□□ -1.18
HERPUD1-206ENST00000563343 THAP12O43422 761 aa7.7□□□□□ -1.18
HERPUD1-206ENST00000563343 KATNA1O75449 491 aa7.7□□□□□ -1.18
HERPUD1-206ENST00000563343 EML2O95834 649 aa7.7□□□□□ -1.18
HERPUD1-206ENST00000563343 F9P00740 461 aa7.7□□□□□ -1.18
HERPUD1-206ENST00000563343 ANKRD34CP0C6C1 535 aa7.7□□□□□ -1.18
HERPUD1-206ENST00000563343 KRT5P13647 590 aa7.7□□□□□ -1.18
HERPUD1-206ENST00000563343 NFKBIAP25963 317 aa7.7□□□□□ -1.18
HERPUD1-206ENST00000563343 ADCY8P40145 1251 aa7.7□□□□□ -1.18
HERPUD1-206ENST00000563343 PRCPP42785 496 aa7.7□□□□□ -1.18
HERPUD1-206ENST00000563343 MAPKAPK2P49137 400 aa7.7□□□□□ -1.18
HERPUD1-206ENST00000563343 NDST2P52849 883 aa7.7□□□□□ -1.18
HERPUD1-206ENST00000563343 RAD51Q06609 339 aa7.7□□□□□ -1.18
HERPUD1-206ENST00000563343 CHAF1BQ13112 559 aa7.7□□□□□ -1.18
HERPUD1-206ENST00000563343 DNASE1L3Q13609 305 aa7.7□□□□□ -1.18
HERPUD1-206ENST00000563343 SLC25A52Q3SY17 297 aa7.7□□□□□ -1.18
HERPUD1-206ENST00000563343 INO80DQ53TQ3 878 aaPredicted RBP7.7□□□□□ -1.18
HERPUD1-206ENST00000563343 CRB2Q5IJ48 1285 aa7.7□□□□□ -1.18
HERPUD1-206ENST00000563343 AFMIDQ63HM1 303 aa7.7□□□□□ -1.18
HERPUD1-206ENST00000563343 SP5Q6BEB4 398 aaPredicted RBP7.7□□□□□ -1.18
HERPUD1-206ENST00000563343 EHBP1Q8NDI1 1231 aa7.7□□□□□ -1.18
HERPUD1-206ENST00000563343 SLC37A2Q8TED4 501 aa7.7□□□□□ -1.18
HERPUD1-206ENST00000563343 CT55Q8WUE5 264 aa7.7□□□□□ -1.18
HERPUD1-206ENST00000563343 PNPLA2Q96AD5 504 aa7.7□□□□□ -1.18
HERPUD1-206ENST00000563343 ECHDC3Q96DC8 303 aa7.7□□□□□ -1.18
HERPUD1-206ENST00000563343 SCARF2Q96GP6 870 aaPredicted RBP7.7□□□□□ -1.18
HERPUD1-206ENST00000563343 EXOC2Q96KP1 924 aa7.7□□□□□ -1.18
HERPUD1-206ENST00000563343 BARD1Q99728 777 aaKnown RBP7.7□□□□□ -1.18
HERPUD1-206ENST00000563343 MAGEB5Q9BZ81 275 aa7.7□□□□□ -1.18
HERPUD1-206ENST00000563343 ULBP3Q9BZM4 244 aa7.7□□□□□ -1.18
HERPUD1-206ENST00000563343 MAGEH1Q9H213 219 aa7.7□□□□□ -1.18
HERPUD1-206ENST00000563343 PLSCR2Q9NRY7 297 aa7.7□□□□□ -1.18
HERPUD1-206ENST00000563343 ASF1BQ9NVP2 202 aa7.7□□□□□ -1.18
HERPUD1-206ENST00000563343 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.7□□□□□ -1.18
HERPUD1-206ENST00000563343 RCOR1Q9UKL0 485 aa7.7□□□□□ -1.18
HERPUD1-206ENST00000563343 PCDHGC3Q9UN70 934 aa7.7□□□□□ -1.18
HERPUD1-206ENST00000563343 PCDHGB7Q9Y5F8 929 aa7.7□□□□□ -1.18
HERPUD1-206ENST00000563343 MN1Q10571 1320 aaPredicted RBP7.7□□□□□ -1.18
HERPUD1-206ENST00000563343 PKDREJQ9NTG1 2253 aa7.69□□□□□ -1.18
HERPUD1-206ENST00000563343 PIPSLA2A3N6 862 aa7.69□□□□□ -1.18
HERPUD1-206ENST00000563343 A6NCN8 305 aa7.69□□□□□ -1.18
HERPUD1-206ENST00000563343 TRIM49BA6NDI0 452 aa7.69□□□□□ -1.18
HERPUD1-206ENST00000563343 ZSCAN5CA6NGD5 496 aaPredicted RBP7.69□□□□□ -1.18
HERPUD1-206ENST00000563343 FAM72CH0Y354 149 aa7.69□□□□□ -1.18
HERPUD1-206ENST00000563343 PDE2AO00408 941 aaPredicted RBP7.69□□□□□ -1.18
HERPUD1-206ENST00000563343 TEX33O43247 280 aa7.69□□□□□ -1.18
HERPUD1-206ENST00000563343 KIAA0754O94854 1291 aa7.69□□□□□ -1.18
HERPUD1-206ENST00000563343 IVLP07476 585 aa7.69□□□□□ -1.18
HERPUD1-206ENST00000563343 RHOQP17081 205 aa7.69□□□□□ -1.18
HERPUD1-206ENST00000563343 XPAP23025 273 aaPredicted RBP7.69□□□□□ -1.18
HERPUD1-206ENST00000563343 VARSP26640 1264 aaKnown RBP7.69□□□□□ -1.18
HERPUD1-206ENST00000563343 FLT3P36888 993 aa7.69□□□□□ -1.18
HERPUD1-206ENST00000563343 GNPDA1P46926 289 aa7.69□□□□□ -1.18
HERPUD1-206ENST00000563343 CCL11P51671 97 aa7.69□□□□□ -1.18
HERPUD1-206ENST00000563343 ITGA1P56199 1179 aa7.69□□□□□ -1.18
HERPUD1-206ENST00000563343 RHOAP61586 193 aa7.69□□□□□ -1.18
HERPUD1-206ENST00000563343 DNM1Q05193 864 aaKnown RBP7.69□□□□□ -1.18
HERPUD1-206ENST00000563343 MMRN1Q13201 1228 aa7.69□□□□□ -1.18
HERPUD1-206ENST00000563343 IL10RAQ13651 578 aa7.69□□□□□ -1.18
HERPUD1-206ENST00000563343 NAA30Q147X3 362 aaPredicted RBP7.69□□□□□ -1.18
HERPUD1-206ENST00000563343 CYTH1Q15438 398 aa7.69□□□□□ -1.18
HERPUD1-206ENST00000563343 CHRNA6Q15825 494 aa7.69□□□□□ -1.18
HERPUD1-206ENST00000563343 UGT8Q16880 541 aa7.69□□□□□ -1.18
HERPUD1-206ENST00000563343 ZXDCQ2QGD7 858 aaPredicted RBP7.69□□□□□ -1.18
HERPUD1-206ENST00000563343 FOXD4L6Q3SYB3 417 aaPredicted RBP7.69□□□□□ -1.18
HERPUD1-206ENST00000563343 RAB6CQ53S08 254 aa7.69□□□□□ -1.18
HERPUD1-206ENST00000563343 COBLL1Q53SF7 1204 aa7.69□□□□□ -1.18
HERPUD1-206ENST00000563343 FAM72AQ5TYM5 149 aa7.69□□□□□ -1.18
HERPUD1-206ENST00000563343 FAM72DQ6L9T8 149 aa7.69□□□□□ -1.18
HERPUD1-206ENST00000563343 ERAP2Q6P179 960 aa7.69□□□□□ -1.18
HERPUD1-206ENST00000563343 BRAT1Q6PJG6 821 aa7.69□□□□□ -1.18
HERPUD1-206ENST00000563343 FOXD4L3Q6VB84 417 aaPredicted RBP7.69□□□□□ -1.18
HERPUD1-206ENST00000563343 DPPA4Q7L190 304 aa7.69□□□□□ -1.18
HERPUD1-206ENST00000563343 FAM72BQ86X60 149 aa7.69□□□□□ -1.18
HERPUD1-206ENST00000563343 FAM131BQ86XD5 332 aa7.69□□□□□ -1.18
HERPUD1-206ENST00000563343 PASD1Q8IV76 773 aa7.69□□□□□ -1.18
HERPUD1-206ENST00000563343 SFRP1Q8N474 314 aa7.69□□□□□ -1.18
HERPUD1-206ENST00000563343 C1orf131Q8NDD1 294 aaKnown RBP7.69□□□□□ -1.18
HERPUD1-206ENST00000563343 OR10G6Q8NH81 332 aa7.69□□□□□ -1.18
HERPUD1-206ENST00000563343 CASKIN2Q8WXE0 1202 aa7.69□□□□□ -1.18
HERPUD1-206ENST00000563343 THAP4Q8WY91 577 aa7.69□□□□□ -1.18
HERPUD1-206ENST00000563343 CCDC47Q96A33 483 aaKnown RBP7.69□□□□□ -1.18
HERPUD1-206ENST00000563343 LURAP1Q96LR2 239 aa7.69□□□□□ -1.18
HERPUD1-206ENST00000563343 COQ10AQ96MF6 247 aa7.69□□□□□ -1.18
HERPUD1-206ENST00000563343 NSMCE3Q96MG7 304 aa7.69□□□□□ -1.18
HERPUD1-206ENST00000563343 NUDT9Q9BW91 350 aa7.69□□□□□ -1.18
HERPUD1-206ENST00000563343 GTPBP4Q9BZE4 634 aaKnown RBP7.69□□□□□ -1.18
HERPUD1-206ENST00000563343 BRD8Q9H0E9 1235 aa7.69□□□□□ -1.18
HERPUD1-206ENST00000563343 RAB6CQ9H0N0 254 aa7.69□□□□□ -1.18
HERPUD1-206ENST00000563343 ACTL8Q9H568 366 aa7.69□□□□□ -1.18
HERPUD1-206ENST00000563343 RETREG1Q9H6L5 497 aa7.69□□□□□ -1.18
HERPUD1-206ENST00000563343 SUDS3Q9H7L9 328 aaPredicted RBP7.69□□□□□ -1.18
HERPUD1-206ENST00000563343 AKIRIN1Q9H9L7 192 aaPredicted RBP7.69□□□□□ -1.18
HERPUD1-206ENST00000563343 SLAMF7Q9NQ25 335 aa7.69□□□□□ -1.18
HERPUD1-206ENST00000563343 STAP1Q9ULZ2 295 aa7.69□□□□□ -1.18
HERPUD1-206ENST00000563343 SLC17A4Q9Y2C5 497 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms