RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 KCNN4O15554 427 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 LIASO43766 372 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 MAGEC1O60732 1142 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 RECQL5O94762 991 aaPredicted RBP6.19□□□□□ -1.42
CNOT1-204ENST00000563130 CER1O95813 267 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 ELFN1P0C7U0 828 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 THEGLP0DJG4 465 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 CYP2A6P11509 494 aaPredicted RBP6.19□□□□□ -1.42
CNOT1-204ENST00000563130 ZNF30P17039 623 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 CTPS1P17812 591 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 SDHBP21912 280 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 IGFALSP35858 605 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 RXRGP48443 463 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 ATXN3P54252 364 aaPredicted RBP6.19□□□□□ -1.42
CNOT1-204ENST00000563130 GDF10P55107 478 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 PTSQ03393 145 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 CDK18Q07002 472 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 LRRC14Q15048 493 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 SHBQ15464 509 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 ZNF569Q5MCW4 686 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 LRRC66Q68CR7 880 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 DRICH1Q6PGQ1 229 aaPredicted RBP6.19□□□□□ -1.42
CNOT1-204ENST00000563130 DARS2Q6PI48 645 aaKnown RBP6.19□□□□□ -1.42
CNOT1-204ENST00000563130 CRTC1Q6UUV9 634 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 USP45Q70EL2 814 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 HSD11B1LQ7Z5J1 315 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 TECPR1Q7Z6L1 1165 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 ADAT2Q7Z6V5 191 aaKnown RBP6.19□□□□□ -1.42
CNOT1-204ENST00000563130 TSPAN33Q86UF1 283 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 NDUFAF2Q8N183 169 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 SLC35F6Q8N357 371 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 RASGEF1CQ8N431 466 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 ATG4AQ8WYN0 398 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 KLHDC7BQ96G42 594 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 SPATA13Q96N96 652 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 ELF4Q99607 663 aaPredicted RBP6.19□□□□□ -1.42
CNOT1-204ENST00000563130 RTKNQ9BST9 563 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 GTPBP2Q9BX10 602 aaKnown RBP6.19□□□□□ -1.42
CNOT1-204ENST00000563130 C1QTNF7Q9BXJ2 289 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 ADGRE3Q9BY15 652 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 GBA3Q9H227 469 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 GDF3Q9NR23 364 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 TTC7AQ9ULT0 858 aaPredicted RBP6.19□□□□□ -1.42
CNOT1-204ENST00000563130 DOLKQ9UPQ8 538 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 FNDC3AQ9Y2H6 1198 aaKnown RBP6.19□□□□□ -1.42
CNOT1-204ENST00000563130 ZKSCAN5Q9Y2L8 839 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 COQ6Q9Y2Z9 468 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 PCDHGB2Q9Y5G2 931 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 ADAMTS9Q9P2N4 1935 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 LRRK1Q38SD2 2015 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 A0A0U1RQS6 177 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 SPTY2D1-AS1A0A0U1RR47 76 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 KIF5CO60282 957 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 LZTS3O60299 673 aaPredicted RBP6.19□□□□□ -1.42
CNOT1-204ENST00000563130 PCDHGA12O60330 932 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 DFNA5O60443 496 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 OPHN1O60890 802 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 GCATO75600 419 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 NDST3O95803 873 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 FGGP02679 453 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 ATP1A1P05023 1023 aaKnown RBP6.19□□□□□ -1.42
CNOT1-204ENST00000563130 ATXN1LP0C7T5 689 aaKnown RBP6.19□□□□□ -1.42
CNOT1-204ENST00000563130 CD59P13987 128 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 STIP1P31948 543 aaKnown RBP6.19□□□□□ -1.42
CNOT1-204ENST00000563130 CXCR5P32302 372 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 TRIM23P36406 574 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 RABIFP47224 123 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 EPHB1P54762 984 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 WNT3AP56704 352 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 C21orf59P57076 290 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 YPEL5P62699 121 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 MPP3Q13368 585 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 IRF4Q15306 451 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 CCNG2Q16589 344 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 TPRG1LQ5T0D9 272 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 ITPRIPL1Q6GPH6 555 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 ESRP1Q6NXG1 681 aaKnown RBP6.19□□□□□ -1.42
CNOT1-204ENST00000563130 RANBP10Q6VN20 620 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 KDM7AQ6ZMT4 941 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 Q6ZSR6 202 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 NLRP8Q86W28 1048 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 DCP2Q8IU60 420 aaKnown RBP6.19□□□□□ -1.42
CNOT1-204ENST00000563130 PAF1Q8N7H5 531 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 FAM71DQ8N9W8 422 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 LPCAT1Q8NF37 534 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 CCDC110Q8TBZ0 833 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 EID2BQ96D98 161 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 DTD2Q96FN9 168 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 IFT43Q96FT9 208 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 FERMT1Q9BQL6 677 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 TMEM121Q9BTD3 319 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 MLPHQ9BV36 600 aaPredicted RBP6.19□□□□□ -1.42
CNOT1-204ENST00000563130 MAGEE1Q9HCI5 957 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 TM7SF3Q9NS93 570 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 KCTD5Q9NXV2 234 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 UBP1Q9NZI7 540 aa6.19□□□□□ -1.42
CNOT1-204ENST00000563130 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.19□□□□□ -1.424e-6■□□□□ 8.7
CNOT1-204ENST00000563130 ASCC3Q8N3C0 2202 aaKnown RBP6.19□□□□□ -1.42
CNOT1-204ENST00000563130 CABIN1Q9Y6J0 2220 aa6.18□□□□□ -1.42
CNOT1-204ENST00000563130 PMPCBO75439 489 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms