RNA–Protein interactions for RNA: ENST00000562610.5

COMMD4-206, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-206ENST00000562610 CDKL3Q8IVW4 592 aaPredicted RBP16.12■□□□□ 0.17
COMMD4-206ENST00000562610 ZNF567Q8N184 647 aa16.12■□□□□ 0.17
COMMD4-206ENST00000562610 RNF10Q8N5U6 811 aaKnown RBP16.12■□□□□ 0.17
COMMD4-206ENST00000562610 FERMT1Q9BQL6 677 aa16.12■□□□□ 0.17
COMMD4-206ENST00000562610 MLPHQ9BV36 600 aaPredicted RBP16.12■□□□□ 0.17
COMMD4-206ENST00000562610 C10orf88Q9H8K7 445 aa16.12■□□□□ 0.17
COMMD4-206ENST00000562610 LZTFL1Q9NQ48 299 aa16.12■□□□□ 0.17
COMMD4-206ENST00000562610 MOSPD1Q9UJG1 213 aa16.12■□□□□ 0.17
COMMD4-206ENST00000562610 ZNF106Q9H2Y7 1883 aaKnown RBP16.12■□□□□ 0.17
COMMD4-206ENST00000562610 GOLGA6L9A6NEM1 432 aa16.11■□□□□ 0.17
COMMD4-206ENST00000562610 ANKRD66B4E2M5 251 aa16.11■□□□□ 0.17
COMMD4-206ENST00000562610 DDX3YO15523 660 aaKnown RBP16.11■□□□□ 0.17
COMMD4-206ENST00000562610 RFPL3O75679 317 aa16.11■□□□□ 0.17
COMMD4-206ENST00000562610 CLDN7O95471 211 aa16.11■□□□□ 0.17
COMMD4-206ENST00000562610 MYCLP1P12525 358 aaPredicted RBP16.11■□□□□ 0.17
COMMD4-206ENST00000562610 CTSEP14091 401 aa16.11■□□□□ 0.17
COMMD4-206ENST00000562610 CKMT2P17540 419 aa16.11■□□□□ 0.17
COMMD4-206ENST00000562610 RBL1P28749 1068 aa16.11■□□□□ 0.17
COMMD4-206ENST00000562610 TNNT3P45378 269 aaPredicted RBP16.11■□□□□ 0.17
COMMD4-206ENST00000562610 ACADVLP49748 655 aa16.11■□□□□ 0.17
COMMD4-206ENST00000562610 HK3P52790 923 aa16.11■□□□□ 0.17
COMMD4-206ENST00000562610 STC1P52823 247 aa16.11■□□□□ 0.17
COMMD4-206ENST00000562610 SRP54P61011 504 aaKnown RBP16.11■□□□□ 0.17
COMMD4-206ENST00000562610 CCZ1BP86790 482 aa16.11■□□□□ 0.17
COMMD4-206ENST00000562610 CCZ1P86791 482 aaPredicted RBP16.11■□□□□ 0.17
COMMD4-206ENST00000562610 C1orf61Q13536 156 aa16.11■□□□□ 0.17
COMMD4-206ENST00000562610 SLC14A2Q15849 920 aa16.11■□□□□ 0.17
COMMD4-206ENST00000562610 PROX2Q3B8N5 592 aa16.11■□□□□ 0.17
COMMD4-206ENST00000562610 NYAP1Q6ZVC0 841 aa16.11■□□□□ 0.17
COMMD4-206ENST00000562610 PID1Q7Z2X4 250 aa16.11■□□□□ 0.17
COMMD4-206ENST00000562610 OR56A4Q8NGH8 313 aa16.11■□□□□ 0.17
COMMD4-206ENST00000562610 AP2M1Q96CW1 435 aa16.11■□□□□ 0.17
COMMD4-206ENST00000562610 VAT1Q99536 393 aa16.11■□□□□ 0.17
COMMD4-206ENST00000562610 DUSP23Q9BVJ7 150 aa16.11■□□□□ 0.17
COMMD4-206ENST00000562610 LGR4Q9BXB1 951 aa16.11■□□□□ 0.17
COMMD4-206ENST00000562610 PHPT1Q9NRX4 125 aaPredicted RBP16.11■□□□□ 0.17
COMMD4-206ENST00000562610 RSPH14Q9UHP6 348 aa16.11■□□□□ 0.17
COMMD4-206ENST00000562610 DOLKQ9UPQ8 538 aa16.11■□□□□ 0.17
COMMD4-206ENST00000562610 WASF3Q9UPY6 502 aa16.11■□□□□ 0.17
COMMD4-206ENST00000562610 TMEM202A6NGA9 273 aa16.1■□□□□ 0.17
COMMD4-206ENST00000562610 STK10O94804 968 aaKnown RBP16.1■□□□□ 0.17
COMMD4-206ENST00000562610 PIRTP0C851 137 aa16.1■□□□□ 0.17
COMMD4-206ENST00000562610 GIMD1P0DJR0 217 aa16.1■□□□□ 0.17
COMMD4-206ENST00000562610 RBP3P10745 1247 aa16.1■□□□□ 0.17
COMMD4-206ENST00000562610 CD68P34810 354 aaPredicted RBP16.1■□□□□ 0.17
COMMD4-206ENST00000562610 GPR1P46091 355 aa16.1■□□□□ 0.17
COMMD4-206ENST00000562610 PTSQ03393 145 aa16.1■□□□□ 0.17
COMMD4-206ENST00000562610 CDK18Q07002 472 aa16.1■□□□□ 0.17
COMMD4-206ENST00000562610 SEL1L2Q5TEA6 688 aa16.1■□□□□ 0.17
COMMD4-206ENST00000562610 CCDC70Q6NSX1 233 aa16.1■□□□□ 0.17
COMMD4-206ENST00000562610 DARS2Q6PI48 645 aaKnown RBP16.1■□□□□ 0.17
COMMD4-206ENST00000562610 DHRS13Q6UX07 377 aa16.1■□□□□ 0.17
COMMD4-206ENST00000562610 RFLNAQ6ZTI6 216 aa16.1■□□□□ 0.17
COMMD4-206ENST00000562610 LYSMD3Q7Z3D4 306 aa16.1■□□□□ 0.17
COMMD4-206ENST00000562610 TECPR1Q7Z6L1 1165 aa16.1■□□□□ 0.17
COMMD4-206ENST00000562610 FSTL5Q8N475 847 aaPredicted RBP16.1■□□□□ 0.17
COMMD4-206ENST00000562610 CCHCR1Q8TD31 782 aa16.1■□□□□ 0.17
COMMD4-206ENST00000562610 HES6Q96HZ4 224 aa16.1■□□□□ 0.17
COMMD4-206ENST00000562610 APOLD1Q96LR9 279 aa16.1■□□□□ 0.17
COMMD4-206ENST00000562610 TBATAQ96M53 351 aa16.1■□□□□ 0.17
COMMD4-206ENST00000562610 ALS2CR12Q96Q35 445 aa16.1■□□□□ 0.17
COMMD4-206ENST00000562610 TRIB3Q96RU7 358 aa16.1■□□□□ 0.17
COMMD4-206ENST00000562610 LYSMD1Q96S90 227 aa16.1■□□□□ 0.17
COMMD4-206ENST00000562610 ABCG8Q9H221 673 aa16.1■□□□□ 0.17
COMMD4-206ENST00000562610 SUDS3Q9H7L9 328 aaPredicted RBP16.1■□□□□ 0.17
COMMD4-206ENST00000562610 FGF22Q9HCT0 170 aa16.1■□□□□ 0.17
COMMD4-206ENST00000562610 MRPL40Q9NQ50 206 aaKnown RBP16.1■□□□□ 0.17
COMMD4-206ENST00000562610 PKD2L2Q9NZM6 624 aa16.1■□□□□ 0.17
COMMD4-206ENST00000562610 FAM153AQ9UHL3 310 aa16.1■□□□□ 0.17
COMMD4-206ENST00000562610 NEUROG3Q9Y4Z2 214 aa16.1■□□□□ 0.17
COMMD4-206ENST00000562610 CSNK1G3Q9Y6M4 447 aa16.1■□□□□ 0.17
COMMD4-206ENST00000562610 ARHGEF17Q96PE2 2063 aaPredicted RBP16.1■□□□□ 0.17
COMMD4-206ENST00000562610 PDE2AO00408 941 aaPredicted RBP16.09■□□□□ 0.17
COMMD4-206ENST00000562610 KCNN4O15554 427 aa16.09■□□□□ 0.17
COMMD4-206ENST00000562610 GCATO75600 419 aa16.09■□□□□ 0.17
COMMD4-206ENST00000562610 DKK1O94907 266 aa16.09■□□□□ 0.17
COMMD4-206ENST00000562610 NDST3O95803 873 aa16.09■□□□□ 0.17
COMMD4-206ENST00000562610 TNFP01375 233 aa16.09■□□□□ 0.17
COMMD4-206ENST00000562610 ANXA6P08133 673 aa16.09■□□□□ 0.17
COMMD4-206ENST00000562610 CELA2BP08218 269 aaPredicted RBP16.09■□□□□ 0.17
COMMD4-206ENST00000562610 TRIM23P36406 574 aa16.09■□□□□ 0.17
COMMD4-206ENST00000562610 CDK3Q00526 305 aa16.09■□□□□ 0.17
COMMD4-206ENST00000562610 ELOCQ15369 112 aa16.09■□□□□ 0.17
COMMD4-206ENST00000562610 KCTD16Q68DU8 428 aa16.09■□□□□ 0.17
COMMD4-206ENST00000562610 ITPRIPL1Q6GPH6 555 aa16.09■□□□□ 0.17
COMMD4-206ENST00000562610 ZCCHC8Q6NZY4 707 aaKnown RBP16.09■□□□□ 0.17
COMMD4-206ENST00000562610 DOK6Q6PKX4 331 aa16.09■□□□□ 0.17
COMMD4-206ENST00000562610 CBARPQ8N350 705 aaPredicted RBP16.09■□□□□ 0.17
COMMD4-206ENST00000562610 IPMKQ8NFU5 416 aa16.09■□□□□ 0.17
COMMD4-206ENST00000562610 OR1E3Q8WZA6 343 aa16.09■□□□□ 0.17
COMMD4-206ENST00000562610 SCAMP4Q969E2 229 aa16.09■□□□□ 0.17
COMMD4-206ENST00000562610 TADA1Q96BN2 335 aa16.09■□□□□ 0.17
COMMD4-206ENST00000562610 CNTNAP3BQ96NU0 1288 aa16.09■□□□□ 0.17
COMMD4-206ENST00000562610 FSD1LQ9BXM9 530 aa16.09■□□□□ 0.17
COMMD4-206ENST00000562610 CNTNAP3Q9BZ76 1288 aa16.09■□□□□ 0.17
COMMD4-206ENST00000562610 GBA3Q9H227 469 aa16.09■□□□□ 0.17
COMMD4-206ENST00000562610 CYP4F12Q9HCS2 524 aa16.09■□□□□ 0.17
COMMD4-206ENST00000562610 EVA1BQ9NVM1 165 aa16.09■□□□□ 0.17
COMMD4-206ENST00000562610 TRHDEQ9UKU6 1024 aa16.09■□□□□ 0.17
COMMD4-206ENST00000562610 SHOC2Q9UQ13 582 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms