RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 SLC2A6Q9UGQ3 507 aa7.55□□□□□ -1.2
TPM1-231ENST00000561395 RIMKLBQ9ULI2 386 aa7.55□□□□□ -1.2
TPM1-231ENST00000561395 HS3ST2Q9Y278 367 aa7.55□□□□□ -1.2
TPM1-231ENST00000561395 FCF1Q9Y324 198 aaKnown RBP7.55□□□□□ -1.2
TPM1-231ENST00000561395 RAI2Q9Y5P3 530 aa7.55□□□□□ -1.2
TPM1-231ENST00000561395 SCN8AQ9UQD0 1980 aa7.55□□□□□ -1.2
TPM1-231ENST00000561395 LAMA5O15230 3695 aa7.55□□□□□ -1.2
TPM1-231ENST00000561395 MUC22E2RYF6 1773 aaPredicted RBP7.54□□□□□ -1.2
TPM1-231ENST00000561395 ZNF106Q9H2Y7 1883 aaKnown RBP7.54□□□□□ -1.2
TPM1-231ENST00000561395 CCDC78A2IDD5 438 aa7.54□□□□□ -1.2
TPM1-231ENST00000561395 GOLGA8TH3BQL2 631 aa7.54□□□□□ -1.2
TPM1-231ENST00000561395 K7ESF4 209 aa7.54□□□□□ -1.2
TPM1-231ENST00000561395 HOXC11O43248 304 aaPredicted RBP7.54□□□□□ -1.2
TPM1-231ENST00000561395 LDB2O43679 373 aa7.54□□□□□ -1.2
TPM1-231ENST00000561395 SOCS5O75159 536 aa7.54□□□□□ -1.2
TPM1-231ENST00000561395 SIN3BO75182 1162 aa7.54□□□□□ -1.2
TPM1-231ENST00000561395 ECI2O75521 394 aa7.54□□□□□ -1.2
TPM1-231ENST00000561395 ZNF821O75541 412 aaPredicted RBP7.54□□□□□ -1.2
TPM1-231ENST00000561395 RFPL1O75677 317 aa7.54□□□□□ -1.2
TPM1-231ENST00000561395 EPN2O95208 641 aa7.54□□□□□ -1.2
TPM1-231ENST00000561395 IGSF6O95976 241 aa7.54□□□□□ -1.2
TPM1-231ENST00000561395 ADH1CP00326 375 aa7.54□□□□□ -1.2
TPM1-231ENST00000561395 PRLP01236 227 aa7.54□□□□□ -1.2
TPM1-231ENST00000561395 ITGA2BP08514 1039 aa7.54□□□□□ -1.2
TPM1-231ENST00000561395 ADH5P11766 374 aa7.54□□□□□ -1.2
TPM1-231ENST00000561395 SRCP12931 536 aa7.54□□□□□ -1.2
TPM1-231ENST00000561395 FCARP24071 287 aa7.54□□□□□ -1.2
TPM1-231ENST00000561395 SPRP35270 261 aaPredicted RBP7.54□□□□□ -1.2
TPM1-231ENST00000561395 VIPR2P41587 438 aa7.54□□□□□ -1.2
TPM1-231ENST00000561395 CTSOP43234 321 aaPredicted RBP7.54□□□□□ -1.2
TPM1-231ENST00000561395 MAPK8P45983 427 aa7.54□□□□□ -1.2
TPM1-231ENST00000561395 CSNK1DP48730 415 aa7.54□□□□□ -1.2
TPM1-231ENST00000561395 STK19P49842 368 aaPredicted RBP7.54□□□□□ -1.2
TPM1-231ENST00000561395 NEK3P51956 506 aa7.54□□□□□ -1.2
TPM1-231ENST00000561395 LIMK2P53671 638 aa7.54□□□□□ -1.2
TPM1-231ENST00000561395 EMP3P54852 163 aa7.54□□□□□ -1.2
TPM1-231ENST00000561395 CSE1LP55060 971 aaKnown RBP7.54□□□□□ -1.2
TPM1-231ENST00000561395 ACVR1Q04771 509 aa7.54□□□□□ -1.2
TPM1-231ENST00000561395 SULT2A1Q06520 285 aa7.54□□□□□ -1.2
TPM1-231ENST00000561395 TRAF2Q12933 501 aa7.54□□□□□ -1.2
TPM1-231ENST00000561395 DNAJC3Q13217 504 aa7.54□□□□□ -1.2
TPM1-231ENST00000561395 GAS6Q14393 721 aa7.54□□□□□ -1.2
TPM1-231ENST00000561395 DHCR24Q15392 516 aa7.54□□□□□ -1.2
TPM1-231ENST00000561395 EML3Q32P44 896 aa7.54□□□□□ -1.2
TPM1-231ENST00000561395 SOWAHCQ53LP3 525 aaPredicted RBP7.54□□□□□ -1.2
TPM1-231ENST00000561395 C6orf132Q5T0Z8 1188 aa7.54□□□□□ -1.2
TPM1-231ENST00000561395 ATXN7L2Q5T6C5 722 aaPredicted RBP7.54□□□□□ -1.2
TPM1-231ENST00000561395 MROH9Q5TGP6 573 aa7.54□□□□□ -1.2
TPM1-231ENST00000561395 C22orf39Q6P5X5 142 aa7.54□□□□□ -1.2
TPM1-231ENST00000561395 STRA8Q7Z7C7 330 aa7.54□□□□□ -1.2
TPM1-231ENST00000561395 KIAA0907Q7Z7F0 614 aaPredicted RBP7.54□□□□□ -1.2
TPM1-231ENST00000561395 SRLQ86TD4 932 aa7.54□□□□□ -1.2
TPM1-231ENST00000561395 ADGRG2Q8IZP9 1017 aa7.54□□□□□ -1.2
TPM1-231ENST00000561395 ANKRD42Q8N9B4 389 aa7.54□□□□□ -1.2
TPM1-231ENST00000561395 BANPQ8N9N5 519 aa7.54□□□□□ -1.2
TPM1-231ENST00000561395 OR13J1Q8NGT2 312 aa7.54□□□□□ -1.2
TPM1-231ENST00000561395 MGARPQ8TDB4 240 aa7.54□□□□□ -1.2
TPM1-231ENST00000561395 BRSK1Q8TDC3 778 aa7.54□□□□□ -1.2
TPM1-231ENST00000561395 BLOC1S5Q8TDH9 187 aa7.54□□□□□ -1.2
TPM1-231ENST00000561395 DENND1AQ8TEH3 1009 aa7.54□□□□□ -1.2
TPM1-231ENST00000561395 FAM3CQ92520 227 aa7.54□□□□□ -1.2
TPM1-231ENST00000561395 PEX13Q92968 403 aa7.54□□□□□ -1.2
TPM1-231ENST00000561395 ISL2Q96A47 359 aa7.54□□□□□ -1.2
TPM1-231ENST00000561395 ISG20Q96AZ6 181 aaKnown RBP7.54□□□□□ -1.2
TPM1-231ENST00000561395 MSANTD3Q96H12 275 aa7.54□□□□□ -1.2
TPM1-231ENST00000561395 SGSM3Q96HU1 749 aa7.54□□□□□ -1.2
TPM1-231ENST00000561395 KLF6Q99612 283 aaPredicted RBP7.54□□□□□ -1.2
TPM1-231ENST00000561395 RBBP8Q99708 897 aa7.54□□□□□ -1.2
TPM1-231ENST00000561395 FAM167BQ9BTA0 163 aa7.54□□□□□ -1.2
TPM1-231ENST00000561395 SCNM1Q9BWG6 230 aa7.54□□□□□ -1.2
TPM1-231ENST00000561395 SLC2A11Q9BYW1 496 aa7.54□□□□□ -1.2
TPM1-231ENST00000561395 CEP44Q9C0F1 390 aa7.54□□□□□ -1.2
TPM1-231ENST00000561395 EPN3Q9H201 632 aa7.54□□□□□ -1.2
TPM1-231ENST00000561395 SMOC1Q9H4F8 434 aa7.54□□□□□ -1.2
TPM1-231ENST00000561395 NPDC1Q9NQX5 325 aaPredicted RBP7.54□□□□□ -1.2
TPM1-231ENST00000561395 IARS2Q9NSE4 1012 aaKnown RBP7.54□□□□□ -1.2
TPM1-231ENST00000561395 OBP2AQ9NY56 170 aa7.54□□□□□ -1.2
TPM1-231ENST00000561395 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.54□□□□□ -1.2
TPM1-231ENST00000561395 TXNDC16Q9P2K2 825 aa7.54□□□□□ -1.2
TPM1-231ENST00000561395 GGT7Q9UJ14 662 aa7.54□□□□□ -1.2
TPM1-231ENST00000561395 CHKBQ9Y259 395 aa7.54□□□□□ -1.2
TPM1-231ENST00000561395 PCDHGC4Q9Y5F7 938 aa7.54□□□□□ -1.2
TPM1-231ENST00000561395 ABCA7Q8IZY2 2146 aa7.54□□□□□ -1.2
TPM1-231ENST00000561395 PTPRBP23467 1997 aa7.53□□□□□ -1.2
TPM1-231ENST00000561395 PLXNB3Q9ULL4 1909 aa7.53□□□□□ -1.2
TPM1-231ENST00000561395 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.53□□□□□ -1.2
TPM1-231ENST00000561395 HEPACAM2A8MVW5 462 aa7.53□□□□□ -1.2
TPM1-231ENST00000561395 GOLGA8RI6L899 631 aa7.53□□□□□ -1.2
TPM1-231ENST00000561395 TM9SF1O15321 606 aa7.53□□□□□ -1.2
TPM1-231ENST00000561395 FZD6O60353 706 aa7.53□□□□□ -1.2
TPM1-231ENST00000561395 ZWINTO95229 277 aa7.53□□□□□ -1.2
TPM1-231ENST00000561395 VAPBO95292 243 aa7.53□□□□□ -1.2
TPM1-231ENST00000561395 NFATC1O95644 943 aa7.53□□□□□ -1.2
TPM1-231ENST00000561395 ASMTLO95671 621 aa7.53□□□□□ -1.2
TPM1-231ENST00000561395 GSRP00390 522 aa7.53□□□□□ -1.2
TPM1-231ENST00000561395 ALDOAP04075 364 aaKnown RBP7.53□□□□□ -1.2
TPM1-231ENST00000561395 PRKCGP05129 697 aa7.53□□□□□ -1.2
TPM1-231ENST00000561395 PDHA1P08559 390 aa7.53□□□□□ -1.2
TPM1-231ENST00000561395 PIRTP0C851 137 aa7.53□□□□□ -1.2
TPM1-231ENST00000561395 CHRNB1P11230 501 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms