RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 CRLS1Q9UJA2 301 aa10.7□□□□□ -0.7
TPM1-229ENST00000561242 ZFR2Q9UPR6 939 aaKnown RBP10.7□□□□□ -0.7
TPM1-229ENST00000561242 COL4A2P08572 1712 aa10.7□□□□□ -0.7
TPM1-229ENST00000561242 MYOFQ9NZM1 2061 aa10.69□□□□□ -0.7
TPM1-229ENST00000561242 FAM187AA6NFU0 413 aa10.69□□□□□ -0.7
TPM1-229ENST00000561242 FZD6O60353 706 aa10.69□□□□□ -0.7
TPM1-229ENST00000561242 ANXA6P08133 673 aa10.69□□□□□ -0.7
TPM1-229ENST00000561242 MMP2P08253 660 aa10.69□□□□□ -0.7
TPM1-229ENST00000561242 MSH3P20585 1137 aa10.69□□□□□ -0.7
TPM1-229ENST00000561242 ITGALP20701 1170 aa10.69□□□□□ -0.7
TPM1-229ENST00000561242 ADRA1DP25100 572 aa10.69□□□□□ -0.7
TPM1-229ENST00000561242 PMLP29590 882 aa10.69□□□□□ -0.7
TPM1-229ENST00000561242 AKT1P31749 480 aa10.69□□□□□ -0.7
TPM1-229ENST00000561242 SPINT3P49223 89 aa10.69□□□□□ -0.7
TPM1-229ENST00000561242 RPIAP49247 311 aa10.69□□□□□ -0.7
TPM1-229ENST00000561242 SESN2P58004 480 aaPredicted RBP10.69□□□□□ -0.7
TPM1-229ENST00000561242 GRIK2Q13002 908 aa10.69□□□□□ -0.7
TPM1-229ENST00000561242 SLC14A1Q13336 389 aa10.69□□□□□ -0.7
TPM1-229ENST00000561242 IRF4Q15306 451 aa10.69□□□□□ -0.7
TPM1-229ENST00000561242 ELOCQ15369 112 aa10.69□□□□□ -0.7
TPM1-229ENST00000561242 HLA-BQ31612 363 aa10.69□□□□□ -0.7
TPM1-229ENST00000561242 TMEM259Q4ZIN3 620 aa10.69□□□□□ -0.7
TPM1-229ENST00000561242 PDPK2PQ6A1A2 396 aa10.69□□□□□ -0.7
TPM1-229ENST00000561242 CEP128Q6ZU80 1094 aa10.69□□□□□ -0.7
TPM1-229ENST00000561242 ZNF765Q7L2R6 523 aa10.69□□□□□ -0.7
TPM1-229ENST00000561242 LYSMD3Q7Z3D4 306 aa10.69□□□□□ -0.7
TPM1-229ENST00000561242 SDCCAG8Q86SQ7 713 aaPredicted RBP10.69□□□□□ -0.7
TPM1-229ENST00000561242 PARGQ86W56 976 aa10.69□□□□□ -0.7
TPM1-229ENST00000561242 PHYKPLQ8IUZ5 450 aa10.69□□□□□ -0.7
TPM1-229ENST00000561242 HID1Q8IV36 788 aa10.69□□□□□ -0.7
TPM1-229ENST00000561242 MINDY1Q8N5J2 469 aa10.69□□□□□ -0.7
TPM1-229ENST00000561242 FAM131CQ96AQ9 280 aa10.69□□□□□ -0.7
TPM1-229ENST00000561242 RTP4Q96DX8 246 aa10.69□□□□□ -0.7
TPM1-229ENST00000561242 DTD2Q96FN9 168 aa10.69□□□□□ -0.7
TPM1-229ENST00000561242 OXNAD1Q96HP4 312 aaPredicted RBP10.69□□□□□ -0.7
TPM1-229ENST00000561242 HIC2Q96JB3 615 aa10.69□□□□□ -0.7
TPM1-229ENST00000561242 WDR92Q96MX6 357 aa10.69□□□□□ -0.7
TPM1-229ENST00000561242 MCCC1Q96RQ3 725 aaPredicted RBP10.69□□□□□ -0.7
TPM1-229ENST00000561242 LYSMD1Q96S90 227 aa10.69□□□□□ -0.7
TPM1-229ENST00000561242 KRT12Q99456 494 aa10.69□□□□□ -0.7
TPM1-229ENST00000561242 ELF4Q99607 663 aaPredicted RBP10.69□□□□□ -0.7
TPM1-229ENST00000561242 HERPUD2Q9BSE4 406 aa10.69□□□□□ -0.7
TPM1-229ENST00000561242 RIOK2Q9BVS4 552 aaKnown RBP10.69□□□□□ -0.7
TPM1-229ENST00000561242 TSSK1BQ9BXA7 367 aa10.69□□□□□ -0.7
TPM1-229ENST00000561242 SMOC1Q9H4F8 434 aa10.69□□□□□ -0.7
TPM1-229ENST00000561242 SUDS3Q9H7L9 328 aaPredicted RBP10.69□□□□□ -0.7
TPM1-229ENST00000561242 ERVMER34-1Q9H9K5 563 aa10.69□□□□□ -0.7
TPM1-229ENST00000561242 XAB2Q9HCS7 855 aaKnown RBP10.69□□□□□ -0.7
TPM1-229ENST00000561242 EIF2B3Q9NR50 452 aaKnown RBP10.69□□□□□ -0.7
TPM1-229ENST00000561242 TMEM74BQ9NUR3 256 aa10.69□□□□□ -0.7
TPM1-229ENST00000561242 CD84Q9UIB8 345 aa10.69□□□□□ -0.7
TPM1-229ENST00000561242 GGT7Q9UJ14 662 aa10.69□□□□□ -0.7
TPM1-229ENST00000561242 CDC23Q9UJX2 597 aa10.69□□□□□ -0.7
TPM1-229ENST00000561242 GPSM3Q9Y4H4 160 aa10.69□□□□□ -0.7
TPM1-229ENST00000561242 MAD1L1Q9Y6D9 718 aa10.69□□□□□ -0.7
TPM1-229ENST00000561242 XIRP2A4UGR9 3374 aa10.69□□□□□ -0.7
TPM1-229ENST00000561242 PRUNE2Q8WUY3 3088 aa10.68□□□□□ -0.7
TPM1-229ENST00000561242 GLYATL1P3A0A0U1RQE8 302 aa10.68□□□□□ -0.7
TPM1-229ENST00000561242 EFCAB8A8MWE9 144 aa10.68□□□□□ -0.7
TPM1-229ENST00000561242 PATE3B3GLJ2 98 aa10.68□□□□□ -0.7
TPM1-229ENST00000561242 USP12O75317 370 aa10.68□□□□□ -0.7
TPM1-229ENST00000561242 METTL18O95568 372 aa10.68□□□□□ -0.7
TPM1-229ENST00000561242 ZSCAN5DPP0CG00 497 aa10.68□□□□□ -0.7
TPM1-229ENST00000561242 JUNDP17535 347 aa10.68□□□□□ -0.7
TPM1-229ENST00000561242 TPH1P17752 444 aa10.68□□□□□ -0.7
TPM1-229ENST00000561242 HMGCLP35914 325 aa10.68□□□□□ -0.7
TPM1-229ENST00000561242 DUSP3P51452 185 aaPredicted RBP10.68□□□□□ -0.7
TPM1-229ENST00000561242 STC1P52823 247 aa10.68□□□□□ -0.7
TPM1-229ENST00000561242 GDF10P55107 478 aa10.68□□□□□ -0.7
TPM1-229ENST00000561242 TMPRSS15P98073 1019 aa10.68□□□□□ -0.7
TPM1-229ENST00000561242 PTSQ03393 145 aa10.68□□□□□ -0.7
TPM1-229ENST00000561242 SEMA5AQ13591 1074 aa10.68□□□□□ -0.7
TPM1-229ENST00000561242 POU6F1Q14863 301 aa10.68□□□□□ -0.7
TPM1-229ENST00000561242 CYP1B1Q16678 543 aa10.68□□□□□ -0.7
TPM1-229ENST00000561242 KIF19Q2TAC6 998 aa10.68□□□□□ -0.7
TPM1-229ENST00000561242 WSCD2Q2TBF2 565 aa10.68□□□□□ -0.7
TPM1-229ENST00000561242 ZRANB3Q5FWF4 1079 aa10.68□□□□□ -0.7
TPM1-229ENST00000561242 PCID2Q5JVF3 399 aa10.68□□□□□ -0.7
TPM1-229ENST00000561242 LDLRAP1Q5SW96 308 aa10.68□□□□□ -0.7
TPM1-229ENST00000561242 LYPLAL1Q5VWZ2 237 aa10.68□□□□□ -0.7
TPM1-229ENST00000561242 ESRP1Q6NXG1 681 aaKnown RBP10.68□□□□□ -0.7
TPM1-229ENST00000561242 C8orf74Q6P047 294 aa10.68□□□□□ -0.7
TPM1-229ENST00000561242 DOK6Q6PKX4 331 aa10.68□□□□□ -0.7
TPM1-229ENST00000561242 KDELC1Q6UW63 502 aa10.68□□□□□ -0.7
TPM1-229ENST00000561242 HSD11B1LQ7Z5J1 315 aa10.68□□□□□ -0.7
TPM1-229ENST00000561242 TMC3Q7Z5M5 1100 aa10.68□□□□□ -0.7
TPM1-229ENST00000561242 TSPAN33Q86UF1 283 aa10.68□□□□□ -0.7
TPM1-229ENST00000561242 NLRP8Q86W28 1048 aa10.68□□□□□ -0.7
TPM1-229ENST00000561242 GKN2Q86XP6 184 aa10.68□□□□□ -0.7
TPM1-229ENST00000561242 PPIL6Q8IXY8 311 aa10.68□□□□□ -0.7
TPM1-229ENST00000561242 PDIK1LQ8N165 341 aa10.68□□□□□ -0.7
TPM1-229ENST00000561242 FSTL5Q8N475 847 aaPredicted RBP10.68□□□□□ -0.7
TPM1-229ENST00000561242 TRAM1L1Q8N609 369 aa10.68□□□□□ -0.7
TPM1-229ENST00000561242 OR13H1Q8NG92 308 aa10.68□□□□□ -0.7
TPM1-229ENST00000561242 OR56A4Q8NGH8 313 aa10.68□□□□□ -0.7
TPM1-229ENST00000561242 OR52K1Q8NGK4 314 aa10.68□□□□□ -0.7
TPM1-229ENST00000561242 OR6P1Q8NGX9 317 aa10.68□□□□□ -0.7
TPM1-229ENST00000561242 GSDMBQ8TAX9 411 aa10.68□□□□□ -0.7
TPM1-229ENST00000561242 RHBDD1Q8TEB9 315 aa10.68□□□□□ -0.7
TPM1-229ENST00000561242 STYXQ8WUJ0 223 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms