RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 GBA3Q9H227 469 aa15.25■□□□□ 0.03
SNRPA1-213ENST00000560856 CARD9Q9H257 536 aa15.25■□□□□ 0.03
SNRPA1-213ENST00000560856 MAGEE1Q9HCI5 957 aa15.25■□□□□ 0.03
SNRPA1-213ENST00000560856 DNPEPQ9ULA0 475 aa15.25■□□□□ 0.03
SNRPA1-213ENST00000560856 SPEGQ15772 3267 aa15.25■□□□□ 0.03
SNRPA1-213ENST00000560856 COL5A1P20908 1838 aaPredicted RBP15.24■□□□□ 0.03
SNRPA1-213ENST00000560856 C1orf232A0A0U1RR37 186 aa15.24■□□□□ 0.03
SNRPA1-213ENST00000560856 GOLGA6L9A6NEM1 432 aa15.24■□□□□ 0.03
SNRPA1-213ENST00000560856 C5orf60A6NFR6 353 aa15.24■□□□□ 0.03
SNRPA1-213ENST00000560856 TMEM202A6NGA9 273 aa15.24■□□□□ 0.03
SNRPA1-213ENST00000560856 SCAMP1O15126 338 aa15.24■□□□□ 0.03
SNRPA1-213ENST00000560856 PIRTP0C851 137 aa15.24■□□□□ 0.03
SNRPA1-213ENST00000560856 SPINT3P49223 89 aa15.24■□□□□ 0.03
SNRPA1-213ENST00000560856 SIX1Q15475 284 aaPredicted RBP15.24■□□□□ 0.03
SNRPA1-213ENST00000560856 INAVAQ3KP66 663 aa15.24■□□□□ 0.03
SNRPA1-213ENST00000560856 LYSMD3Q7Z3D4 306 aa15.24■□□□□ 0.03
SNRPA1-213ENST00000560856 TMC3Q7Z5M5 1100 aa15.24■□□□□ 0.03
SNRPA1-213ENST00000560856 PHACTR4Q8IZ21 702 aa15.24■□□□□ 0.03
SNRPA1-213ENST00000560856 NRSN1Q8IZ57 195 aa15.24■□□□□ 0.03
SNRPA1-213ENST00000560856 ZNF548Q8NEK5 533 aaPredicted RBP15.24■□□□□ 0.03
SNRPA1-213ENST00000560856 CCDC110Q8TBZ0 833 aa15.24■□□□□ 0.03
SNRPA1-213ENST00000560856 TSACCQ96A04 125 aaPredicted RBP15.24■□□□□ 0.03
SNRPA1-213ENST00000560856 TBATAQ96M53 351 aa15.24■□□□□ 0.03
SNRPA1-213ENST00000560856 WDR92Q96MX6 357 aa15.24■□□□□ 0.03
SNRPA1-213ENST00000560856 SPATA13Q96N96 652 aa15.24■□□□□ 0.03
SNRPA1-213ENST00000560856 ALS2CR12Q96Q35 445 aa15.24■□□□□ 0.03
SNRPA1-213ENST00000560856 AGAP2Q99490 1192 aa15.24■□□□□ 0.03
SNRPA1-213ENST00000560856 RSPH14Q9UHP6 348 aa15.24■□□□□ 0.03
SNRPA1-213ENST00000560856 CD84Q9UIB8 345 aa15.24■□□□□ 0.03
SNRPA1-213ENST00000560856 SPO11Q9Y5K1 396 aa15.24■□□□□ 0.03
SNRPA1-213ENST00000560856 CSNK1G3Q9Y6M4 447 aa15.24■□□□□ 0.03
SNRPA1-213ENST00000560856 KNTC1P50748 2209 aa15.24■□□□□ 0.03
SNRPA1-213ENST00000560856 TPRP12270 2363 aaKnown RBP15.23■□□□□ 0.03
SNRPA1-213ENST00000560856 TNFSF14O43557 240 aa15.23■□□□□ 0.03
SNRPA1-213ENST00000560856 SIGLEC6O43699 453 aa15.23■□□□□ 0.03
SNRPA1-213ENST00000560856 GCATO75600 419 aa15.23■□□□□ 0.03
SNRPA1-213ENST00000560856 FUCA1P04066 466 aa15.23■□□□□ 0.03
SNRPA1-213ENST00000560856 FTH1P19P0C7X4 201 aa15.23■□□□□ 0.03
SNRPA1-213ENST00000560856 TSHRP16473 764 aa15.23■□□□□ 0.03
SNRPA1-213ENST00000560856 PSMB4P28070 264 aa15.23■□□□□ 0.03
SNRPA1-213ENST00000560856 ADRA1AP35348 466 aa15.23■□□□□ 0.03
SNRPA1-213ENST00000560856 CHRNA4P43681 627 aa15.23■□□□□ 0.03
SNRPA1-213ENST00000560856 HK3P52790 923 aa15.23■□□□□ 0.03
SNRPA1-213ENST00000560856 GDF10P55107 478 aa15.23■□□□□ 0.03
SNRPA1-213ENST00000560856 PPARDQ03181 441 aa15.23■□□□□ 0.03
SNRPA1-213ENST00000560856 MPP3Q13368 585 aa15.23■□□□□ 0.03
SNRPA1-213ENST00000560856 OASLQ15646 514 aaKnown RBP15.23■□□□□ 0.03
SNRPA1-213ENST00000560856 PROX2Q3B8N5 592 aa15.23■□□□□ 0.03
SNRPA1-213ENST00000560856 SIRPB2Q5JXA9 342 aa15.23■□□□□ 0.03
SNRPA1-213ENST00000560856 SEL1L2Q5TEA6 688 aa15.23■□□□□ 0.03
SNRPA1-213ENST00000560856 ENPP7Q6UWV6 458 aa15.23■□□□□ 0.03
SNRPA1-213ENST00000560856 OR4C6Q8NH72 309 aa15.23■□□□□ 0.03
SNRPA1-213ENST00000560856 ATG4AQ8WYN0 398 aa15.23■□□□□ 0.03
SNRPA1-213ENST00000560856 OR1E3Q8WZA6 343 aa15.23■□□□□ 0.03
SNRPA1-213ENST00000560856 AP2M1Q96CW1 435 aa15.23■□□□□ 0.03
SNRPA1-213ENST00000560856 LRRC61Q9BV99 259 aa15.23■□□□□ 0.03
SNRPA1-213ENST00000560856 CLPBQ9H078 707 aa15.23■□□□□ 0.03
SNRPA1-213ENST00000560856 WDR26Q9H7D7 661 aa15.23■□□□□ 0.03
SNRPA1-213ENST00000560856 FGF22Q9HCT0 170 aa15.23■□□□□ 0.03
SNRPA1-213ENST00000560856 DGKBQ9Y6T7 804 aa15.23■□□□□ 0.03
SNRPA1-213ENST00000560856 LRP4O75096 1905 aa15.22■□□□□ 0.03
SNRPA1-213ENST00000560856 LY6G6EA0A0G2JKS1 128 aa15.22■□□□□ 0.03
SNRPA1-213ENST00000560856 RGSL1A5PLK6 1076 aa15.22■□□□□ 0.03
SNRPA1-213ENST00000560856 H3BM21 787 aa15.22■□□□□ 0.03
SNRPA1-213ENST00000560856 TNFRSF10CO14798 259 aa15.22■□□□□ 0.03
SNRPA1-213ENST00000560856 AURKAO14965 403 aa15.22■□□□□ 0.03
SNRPA1-213ENST00000560856 AQP9O43315 295 aa15.22■□□□□ 0.03
SNRPA1-213ENST00000560856 LIASO43766 372 aa15.22■□□□□ 0.03
SNRPA1-213ENST00000560856 LDOC1O95751 146 aaPredicted RBP15.22■□□□□ 0.03
SNRPA1-213ENST00000560856 TOP3BO95985 862 aaKnown RBP15.22■□□□□ 0.03
SNRPA1-213ENST00000560856 HTR1BP28222 390 aa15.22■□□□□ 0.03
SNRPA1-213ENST00000560856 SRP54P61011 504 aaKnown RBP15.22■□□□□ 0.03
SNRPA1-213ENST00000560856 CDK3Q00526 305 aa15.22■□□□□ 0.03
SNRPA1-213ENST00000560856 MSLNQ13421 630 aaPredicted RBP15.22■□□□□ 0.03
SNRPA1-213ENST00000560856 SLC1A5Q15758 541 aa15.22■□□□□ 0.03
SNRPA1-213ENST00000560856 PRRT3Q5FWE3 981 aa15.22■□□□□ 0.03
SNRPA1-213ENST00000560856 HENMT1Q5T8I9 393 aaKnown RBP15.22■□□□□ 0.03
SNRPA1-213ENST00000560856 FAXCQ5TGI0 409 aa15.22■□□□□ 0.03
SNRPA1-213ENST00000560856 ITPRIPL1Q6GPH6 555 aa15.22■□□□□ 0.03
SNRPA1-213ENST00000560856 ADAMTSL4Q6UY14 1074 aa15.22■□□□□ 0.03
SNRPA1-213ENST00000560856 RANBP10Q6VN20 620 aa15.22■□□□□ 0.03
SNRPA1-213ENST00000560856 HEATR4Q86WZ0 1026 aa15.22■□□□□ 0.03
SNRPA1-213ENST00000560856 HID1Q8IV36 788 aa15.22■□□□□ 0.03
SNRPA1-213ENST00000560856 TTC30BQ8N4P2 665 aa15.22■□□□□ 0.03
SNRPA1-213ENST00000560856 FAM71DQ8N9W8 422 aa15.22■□□□□ 0.03
SNRPA1-213ENST00000560856 IPMKQ8NFU5 416 aa15.22■□□□□ 0.03
SNRPA1-213ENST00000560856 BTN2A2Q8WVV5 523 aa15.22■□□□□ 0.03
SNRPA1-213ENST00000560856 RTP4Q96DX8 246 aa15.22■□□□□ 0.03
SNRPA1-213ENST00000560856 PDXPQ96GD0 296 aa15.22■□□□□ 0.03
SNRPA1-213ENST00000560856 CNDP2Q96KP4 475 aaKnown RBP15.22■□□□□ 0.03
SNRPA1-213ENST00000560856 RIOK2Q9BVS4 552 aaKnown RBP15.22■□□□□ 0.03
SNRPA1-213ENST00000560856 FRMD8Q9BZ67 464 aaPredicted RBP15.22■□□□□ 0.03
SNRPA1-213ENST00000560856 ZFYVE1Q9HBF4 777 aa15.22■□□□□ 0.03
SNRPA1-213ENST00000560856 FTSJ1Q9UET6 329 aa15.22■□□□□ 0.03
SNRPA1-213ENST00000560856 APOBEC3BQ9UH17 382 aaKnown RBP15.22■□□□□ 0.03
SNRPA1-213ENST00000560856 CNOT6Q9ULM6 557 aaKnown RBP15.22■□□□□ 0.03
SNRPA1-213ENST00000560856 SHOC2Q9UQ13 582 aa15.22■□□□□ 0.03
SNRPA1-213ENST00000560856 ZNF711Q9Y462 761 aa15.22■□□□□ 0.03
SNRPA1-213ENST00000560856 U3KQA8 63 aa15.22■□□□□ 0.03
SNRPA1-213ENST00000560856 LMO7DNF2Z398 122 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms