RNA–Protein interactions for RNA: ENST00000560754.1

RNF31-223, Transcript of ring finger protein 31, human

TSL 3

Gene RNF31, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF31-223	ENST00000560754	CD1C	P29017	333 aa		13.63	□□□□□ -0.23
RNF31-223	ENST00000560754	ARL4A	P40617	200 aa		13.63	□□□□□ -0.23
RNF31-223	ENST00000560754	ETV5	P41161	510 aa		13.63	□□□□□ -0.23
RNF31-223	ENST00000560754	ETV3	P41162	512 aa		13.63	□□□□□ -0.23
RNF31-223	ENST00000560754	KLHL30	Q0D2K2	578 aa		13.63	□□□□□ -0.23
RNF31-223	ENST00000560754	TRAF2	Q12933	501 aa		13.63	□□□□□ -0.23
RNF31-223	ENST00000560754	PIGH	Q14442	188 aa	Predicted RBP	13.63	□□□□□ -0.23
RNF31-223	ENST00000560754	CCDC183	Q5T5S1	534 aa		13.63	□□□□□ -0.23
RNF31-223	ENST00000560754	MARC1	Q5VT66	337 aa		13.63	□□□□□ -0.23
RNF31-223	ENST00000560754	TMCO3	Q6UWJ1	677 aa		13.63	□□□□□ -0.23
RNF31-223	ENST00000560754		Q6ZVL8	140 aa		13.63	□□□□□ -0.23
RNF31-223	ENST00000560754	USP53	Q70EK8	1073 aa		13.63	□□□□□ -0.23
RNF31-223	ENST00000560754	HEATR4	Q86WZ0	1026 aa		13.63	□□□□□ -0.23
RNF31-223	ENST00000560754	JAML	Q86YT9	394 aa		13.63	□□□□□ -0.23
RNF31-223	ENST00000560754	FAM71B	Q8TC56	605 aa		13.63	□□□□□ -0.23
RNF31-223	ENST00000560754	ZDHHC1	Q8WTX9	485 aa		13.63	□□□□□ -0.23
RNF31-223	ENST00000560754	PTCD2	Q8WV60	388 aa	Known RBP	13.63	□□□□□ -0.23
RNF31-223	ENST00000560754	TEKT4	Q8WW24	435 aa		13.63	□□□□□ -0.23
RNF31-223	ENST00000560754	USP7	Q93009	1102 aa		13.63	□□□□□ -0.23
RNF31-223	ENST00000560754	SGF29	Q96ES7	293 aa		13.63	□□□□□ -0.23
RNF31-223	ENST00000560754	TRIM11	Q96F44	468 aa		13.63	□□□□□ -0.23
RNF31-223	ENST00000560754	DTD2	Q96FN9	168 aa		13.63	□□□□□ -0.23
RNF31-223	ENST00000560754	CSPG4P5	Q96PW8	444 aa		13.63	□□□□□ -0.23
RNF31-223	ENST00000560754	GSDMC	Q9BYG8	508 aa		13.63	□□□□□ -0.23
RNF31-223	ENST00000560754	CARS2	Q9HA77	564 aa	Known RBP	13.63	□□□□□ -0.23
RNF31-223	ENST00000560754	TAAR2	Q9P1P5	351 aa		13.63	□□□□□ -0.23
RNF31-223	ENST00000560754	MOSPD1	Q9UJG1	213 aa		13.63	□□□□□ -0.23
RNF31-223	ENST00000560754	HECTD1	Q9ULT8	2610 aa		13.63	□□□□□ -0.23
RNF31-223	ENST00000560754	PRAMEF33	A0A0G2JMD5	474 aa		13.62	□□□□□ -0.23
RNF31-223	ENST00000560754		A0A1B0GTH6	734 aa		13.62	□□□□□ -0.23
RNF31-223	ENST00000560754	NPIPB15	A6NHN6	443 aa	Predicted RBP	13.62	□□□□□ -0.23
RNF31-223	ENST00000560754	SMTNL1	A8MU46	457 aa		13.62	□□□□□ -0.23
RNF31-223	ENST00000560754		B4DGG1	531 aa		13.62	□□□□□ -0.23
RNF31-223	ENST00000560754	C9orf172	C9J069	976 aa		13.62	□□□□□ -0.23
RNF31-223	ENST00000560754	PRAMEF10	O60809	474 aa		13.62	□□□□□ -0.23
RNF31-223	ENST00000560754	PGLS	O95336	258 aa		13.62	□□□□□ -0.23
RNF31-223	ENST00000560754	ECEL1	O95672	775 aa		13.62	□□□□□ -0.23
RNF31-223	ENST00000560754	IVL	P07476	585 aa		13.62	□□□□□ -0.23
RNF31-223	ENST00000560754	CYP2A6	P11509	494 aa	Predicted RBP	13.62	□□□□□ -0.23
RNF31-223	ENST00000560754	CD82	P27701	267 aa		13.62	□□□□□ -0.23
RNF31-223	ENST00000560754	CDH6	P55285	790 aa		13.62	□□□□□ -0.23
RNF31-223	ENST00000560754	OR1D5	P58170	312 aa		13.62	□□□□□ -0.23
RNF31-223	ENST00000560754	CDK3	Q00526	305 aa		13.62	□□□□□ -0.23
RNF31-223	ENST00000560754	CTBS	Q01459	385 aa		13.62	□□□□□ -0.23
RNF31-223	ENST00000560754	PTS	Q03393	145 aa		13.62	□□□□□ -0.23
RNF31-223	ENST00000560754	ILF3	Q12906	894 aa	Known RBP eCLIP	13.62	□□□□□ -0.23
RNF31-223	ENST00000560754	PEX6	Q13608	980 aa		13.62	□□□□□ -0.23
RNF31-223	ENST00000560754	ZNF235	Q14590	738 aa		13.62	□□□□□ -0.23
RNF31-223	ENST00000560754	C16orf72	Q14CZ0	275 aa		13.62	□□□□□ -0.23
RNF31-223	ENST00000560754	PTPRR	Q15256	657 aa		13.62	□□□□□ -0.23
RNF31-223	ENST00000560754	ANO6	Q4KMQ2	910 aa		13.62	□□□□□ -0.23
RNF31-223	ENST00000560754	FILIP1L	Q4L180	1135 aa		13.62	□□□□□ -0.23
RNF31-223	ENST00000560754	FIGN	Q5HY92	759 aa		13.62	□□□□□ -0.23
RNF31-223	ENST00000560754	HGSNAT	Q68CP4	663 aa		13.62	□□□□□ -0.23
RNF31-223	ENST00000560754	TXNRD3NB	Q6F5E7	133 aa		13.62	□□□□□ -0.23
RNF31-223	ENST00000560754	ZFAND4	Q86XD8	727 aa		13.62	□□□□□ -0.23
RNF31-223	ENST00000560754	NAGS	Q8N159	534 aa		13.62	□□□□□ -0.23
RNF31-223	ENST00000560754	BBS5	Q8N3I7	341 aa		13.62	□□□□□ -0.23
RNF31-223	ENST00000560754	PAF1	Q8N7H5	531 aa		13.62	□□□□□ -0.23
RNF31-223	ENST00000560754	NIPA2	Q8N8Q9	360 aa		13.62	□□□□□ -0.23
RNF31-223	ENST00000560754	PDCD6IP	Q8WUM4	868 aa	Known RBP	13.62	□□□□□ -0.23
RNF31-223	ENST00000560754	ZNF653	Q96CK0	615 aa		13.62	□□□□□ -0.23
RNF31-223	ENST00000560754	SEMA3C	Q99985	751 aa		13.62	□□□□□ -0.23
RNF31-223	ENST00000560754	RDH14	Q9HBH5	336 aa		13.62	□□□□□ -0.23
RNF31-223	ENST00000560754	SEPT10	Q9P0V9	454 aa		13.62	□□□□□ -0.23
RNF31-223	ENST00000560754	MYO1A	Q9UBC5	1043 aa		13.62	□□□□□ -0.23
RNF31-223	ENST00000560754	SUFU	Q9UMX1	484 aa		13.62	□□□□□ -0.23
RNF31-223	ENST00000560754	NAV2	Q8IVL1	2488 aa		13.62	□□□□□ -0.23
RNF31-223	ENST00000560754	HGS	O14964	777 aa	Predicted RBP	13.61	□□□□□ -0.23
RNF31-223	ENST00000560754	PPM1D	O15297	605 aa		13.61	□□□□□ -0.23
RNF31-223	ENST00000560754	ZW10	O43264	779 aa		13.61	□□□□□ -0.23
RNF31-223	ENST00000560754	MBD3	O95983	291 aa		13.61	□□□□□ -0.23
RNF31-223	ENST00000560754	SOD1	P00441	154 aa		13.61	□□□□□ -0.23
RNF31-223	ENST00000560754	CP	P00450	1065 aa		13.61	□□□□□ -0.23
RNF31-223	ENST00000560754	PDHA1	P08559	390 aa		13.61	□□□□□ -0.23
RNF31-223	ENST00000560754	AK4	P27144	223 aa	Predicted RBP	13.61	□□□□□ -0.23
RNF31-223	ENST00000560754	ALDH4A1	P30038	563 aa		13.61	□□□□□ -0.23
RNF31-223	ENST00000560754	ADCY8	P40145	1251 aa		13.61	□□□□□ -0.23
RNF31-223	ENST00000560754	MMP13	P45452	471 aa		13.61	□□□□□ -0.23
RNF31-223	ENST00000560754	POLD2	P49005	469 aa		13.61	□□□□□ -0.23
RNF31-223	ENST00000560754	LIMK2	P53671	638 aa		13.61	□□□□□ -0.23
RNF31-223	ENST00000560754	MAZ	P56270	477 aa	Known RBP	13.61	□□□□□ -0.23
RNF31-223	ENST00000560754	MAX	P61244	160 aa		13.61	□□□□□ -0.23
RNF31-223	ENST00000560754	SRSF6	Q13247	344 aa	Known RBP	13.61	□□□□□ -0.23
RNF31-223	ENST00000560754	IHH	Q14623	411 aa		13.61	□□□□□ -0.23
RNF31-223	ENST00000560754	SMTNL2	Q2TAL5	461 aa		13.61	□□□□□ -0.23
RNF31-223	ENST00000560754	ARMC12	Q5T9G4	340 aa		13.61	□□□□□ -0.23
RNF31-223	ENST00000560754	TSPAN33	Q86UF1	283 aa		13.61	□□□□□ -0.23
RNF31-223	ENST00000560754	RAVER1	Q8IY67	606 aa	Known RBP	13.61	□□□□□ -0.23
RNF31-223	ENST00000560754	SYN2	Q92777	582 aa	Predicted RBP	13.61	□□□□□ -0.23
RNF31-223	ENST00000560754	PCDH18	Q9HCL0	1135 aa		13.61	□□□□□ -0.23
RNF31-223	ENST00000560754	FOXJ2	Q9P0K8	574 aa		13.61	□□□□□ -0.23
RNF31-223	ENST00000560754	TMEM63C	Q9P1W3	806 aa		13.61	□□□□□ -0.23
RNF31-223	ENST00000560754	PDP2	Q9P2J9	529 aa		13.61	□□□□□ -0.23
RNF31-223	ENST00000560754	RCOR3	Q9P2K3	495 aa	Predicted RBP	13.61	□□□□□ -0.23
RNF31-223	ENST00000560754	PCDHGA3	Q9Y5H0	932 aa		13.61	□□□□□ -0.23
RNF31-223	ENST00000560754	BZW2	Q9Y6E2	419 aa	Known RBP	13.61	□□□□□ -0.23
RNF31-223	ENST00000560754	IGHV5-10-1	A0A0J9YXX1	117 aa		13.6	□□□□□ -0.23
RNF31-223	ENST00000560754	RHPN2P1	A8MT19	583 aa		13.6	□□□□□ -0.23
RNF31-223	ENST00000560754	GOLGA6L22	H0YM25	854 aa		13.6	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms