RNA–Protein interactions for RNA: ENST00000560730.5

USP8-212, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,449 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-212ENST00000560730 SLC35B2Q8TB61 432 aa12.07□□□□□ -0.48
USP8-212ENST00000560730 CCDC110Q8TBZ0 833 aa12.07□□□□□ -0.48
USP8-212ENST00000560730 MRGPRX2Q96LB1 330 aa12.07□□□□□ -0.48
USP8-212ENST00000560730 ALS2CR12Q96Q35 445 aa12.07□□□□□ -0.48
USP8-212ENST00000560730 WDR24Q96S15 920 aa12.07□□□□□ -0.48
USP8-212ENST00000560730 AGAP2Q99490 1192 aa12.07□□□□□ -0.48
USP8-212ENST00000560730 CDC6Q99741 560 aa12.07□□□□□ -0.48
USP8-212ENST00000560730 TOR4AQ9NXH8 423 aa12.07□□□□□ -0.48
USP8-212ENST00000560730 RSPH14Q9UHP6 348 aa12.07□□□□□ -0.48
USP8-212ENST00000560730 DNPEPQ9ULA0 475 aa12.07□□□□□ -0.48
USP8-212ENST00000560730 SHOC2Q9UQ13 582 aa12.07□□□□□ -0.48
USP8-212ENST00000560730 SPO11Q9Y5K1 396 aa12.07□□□□□ -0.48
USP8-212ENST00000560730 RP1P56715 2156 aa12.06□□□□□ -0.48
USP8-212ENST00000560730 LOC285095A0A1B0GVY8 99 aa12.06□□□□□ -0.48
USP8-212ENST00000560730 SIGLEC6O43699 453 aa12.06□□□□□ -0.48
USP8-212ENST00000560730 GCATO75600 419 aa12.06□□□□□ -0.48
USP8-212ENST00000560730 SOD1P00441 154 aa12.06□□□□□ -0.48
USP8-212ENST00000560730 FTH1P19P0C7X4 201 aa12.06□□□□□ -0.48
USP8-212ENST00000560730 PSMB4P28070 264 aa12.06□□□□□ -0.48
USP8-212ENST00000560730 KIAA1024LP59773 190 aa12.06□□□□□ -0.48
USP8-212ENST00000560730 HNRNPKP61978 463 aaKnown RBP eCLIP12.06□□□□□ -0.48
USP8-212ENST00000560730 DNAJC3Q13217 504 aa12.06□□□□□ -0.48
USP8-212ENST00000560730 C1orf61Q13536 156 aa12.06□□□□□ -0.48
USP8-212ENST00000560730 TCEA2Q15560 299 aa12.06□□□□□ -0.48
USP8-212ENST00000560730 SEL1L2Q5TEA6 688 aa12.06□□□□□ -0.48
USP8-212ENST00000560730 FAXCQ5TGI0 409 aa12.06□□□□□ -0.48
USP8-212ENST00000560730 HID1Q8IV36 788 aa12.06□□□□□ -0.48
USP8-212ENST00000560730 SLC25A41Q8N5S1 370 aa12.06□□□□□ -0.48
USP8-212ENST00000560730 FAM71DQ8N9W8 422 aa12.06□□□□□ -0.48
USP8-212ENST00000560730 ZNF548Q8NEK5 533 aaPredicted RBP12.06□□□□□ -0.48
USP8-212ENST00000560730 IPMKQ8NFU5 416 aa12.06□□□□□ -0.48
USP8-212ENST00000560730 TRIM58Q8NG06 486 aa12.06□□□□□ -0.48
USP8-212ENST00000560730 LMX1AQ8TE12 382 aa12.06□□□□□ -0.48
USP8-212ENST00000560730 UBE2Q2Q8WVN8 375 aa12.06□□□□□ -0.48
USP8-212ENST00000560730 C1orf54Q8WWF1 131 aa12.06□□□□□ -0.48
USP8-212ENST00000560730 OR1E3Q8WZA6 343 aa12.06□□□□□ -0.48
USP8-212ENST00000560730 WDR92Q96MX6 357 aa12.06□□□□□ -0.48
USP8-212ENST00000560730 SPATA13Q96N96 652 aa12.06□□□□□ -0.48
USP8-212ENST00000560730 TMEM121Q9BTD3 319 aa12.06□□□□□ -0.48
USP8-212ENST00000560730 RIOK2Q9BVS4 552 aaKnown RBP12.06□□□□□ -0.48
USP8-212ENST00000560730 CLPBQ9H078 707 aa12.06□□□□□ -0.48
USP8-212ENST00000560730 GBA3Q9H227 469 aa12.06□□□□□ -0.48
USP8-212ENST00000560730 MRPL40Q9NQ50 206 aaKnown RBP12.06□□□□□ -0.48
USP8-212ENST00000560730 FTSJ1Q9UET6 329 aa12.06□□□□□ -0.48
USP8-212ENST00000560730 ZFC3H1O60293 1989 aaKnown RBP12.05□□□□□ -0.48
USP8-212ENST00000560730 PLXNB3Q9ULL4 1909 aa12.05□□□□□ -0.48
USP8-212ENST00000560730 GOLGA6CA6NDK9 693 aa12.05□□□□□ -0.48
USP8-212ENST00000560730 GOLGA6BA6NDN3 693 aa12.05□□□□□ -0.48
USP8-212ENST00000560730 AURKAO14965 403 aa12.05□□□□□ -0.48
USP8-212ENST00000560730 AQP9O43315 295 aa12.05□□□□□ -0.48
USP8-212ENST00000560730 TNFSF14O43557 240 aa12.05□□□□□ -0.48
USP8-212ENST00000560730 LDOC1O95751 146 aaPredicted RBP12.05□□□□□ -0.48
USP8-212ENST00000560730 AGTP01019 485 aa12.05□□□□□ -0.48
USP8-212ENST00000560730 FUCA1P04066 466 aa12.05□□□□□ -0.48
USP8-212ENST00000560730 CELA2BP08218 269 aaPredicted RBP12.05□□□□□ -0.48
USP8-212ENST00000560730 HOXC4P09017 264 aaPredicted RBP12.05□□□□□ -0.48
USP8-212ENST00000560730 GOLGA6DP0CG33 693 aa12.05□□□□□ -0.48
USP8-212ENST00000560730 MYF5P13349 255 aa12.05□□□□□ -0.48
USP8-212ENST00000560730 SPINK2P20155 84 aa12.05□□□□□ -0.48
USP8-212ENST00000560730 PMLP29590 882 aa12.05□□□□□ -0.48
USP8-212ENST00000560730 CXCR5P32302 372 aa12.05□□□□□ -0.48
USP8-212ENST00000560730 SPINT3P49223 89 aa12.05□□□□□ -0.48
USP8-212ENST00000560730 GDF10P55107 478 aa12.05□□□□□ -0.48
USP8-212ENST00000560730 SRP54P61011 504 aaKnown RBP12.05□□□□□ -0.48
USP8-212ENST00000560730 PPARDQ03181 441 aa12.05□□□□□ -0.48
USP8-212ENST00000560730 DPTQ07507 201 aa12.05□□□□□ -0.48
USP8-212ENST00000560730 FOXC1Q12948 553 aa12.05□□□□□ -0.48
USP8-212ENST00000560730 OLIG2Q13516 323 aa12.05□□□□□ -0.48
USP8-212ENST00000560730 SIX1Q15475 284 aaPredicted RBP12.05□□□□□ -0.48
USP8-212ENST00000560730 INAVAQ3KP66 663 aa12.05□□□□□ -0.48
USP8-212ENST00000560730 PRRT3Q5FWE3 981 aa12.05□□□□□ -0.48
USP8-212ENST00000560730 SIRPB2Q5JXA9 342 aa12.05□□□□□ -0.48
USP8-212ENST00000560730 RAET1GQ6H3X3 334 aa12.05□□□□□ -0.48
USP8-212ENST00000560730 RD3Q7Z3Z2 195 aa12.05□□□□□ -0.48
USP8-212ENST00000560730 HEATR4Q86WZ0 1026 aa12.05□□□□□ -0.48
USP8-212ENST00000560730 OR4C6Q8NH72 309 aa12.05□□□□□ -0.48
USP8-212ENST00000560730 PTCD2Q8WV60 388 aaKnown RBP12.05□□□□□ -0.48
USP8-212ENST00000560730 AP2M1Q96CW1 435 aa12.05□□□□□ -0.48
USP8-212ENST00000560730 PDXPQ96GD0 296 aa12.05□□□□□ -0.48
USP8-212ENST00000560730 CNDP2Q96KP4 475 aaKnown RBP12.05□□□□□ -0.48
USP8-212ENST00000560730 LRRC61Q9BV99 259 aa12.05□□□□□ -0.48
USP8-212ENST00000560730 TEX101Q9BY14 249 aa12.05□□□□□ -0.48
USP8-212ENST00000560730 CARD9Q9H257 536 aa12.05□□□□□ -0.48
USP8-212ENST00000560730 WDR26Q9H7D7 661 aa12.05□□□□□ -0.48
USP8-212ENST00000560730 MAGEE1Q9HCI5 957 aa12.05□□□□□ -0.48
USP8-212ENST00000560730 FGF22Q9HCT0 170 aa12.05□□□□□ -0.48
USP8-212ENST00000560730 TRMT1Q9NXH9 659 aaKnown RBP12.05□□□□□ -0.48
USP8-212ENST00000560730 KCTD5Q9NXV2 234 aa12.05□□□□□ -0.48
USP8-212ENST00000560730 GOLGA6AQ9NYA3 693 aa12.05□□□□□ -0.48
USP8-212ENST00000560730 KLQ9UEF7 1012 aa12.05□□□□□ -0.48
USP8-212ENST00000560730 APOBEC3BQ9UH17 382 aaKnown RBP12.05□□□□□ -0.48
USP8-212ENST00000560730 WASF3Q9UPY6 502 aa12.05□□□□□ -0.48
USP8-212ENST00000560730 ZNF711Q9Y462 761 aa12.05□□□□□ -0.48
USP8-212ENST00000560730 MYLKQ15746 1914 aa12.05□□□□□ -0.48
USP8-212ENST00000560730 C5orf60A6NFR6 353 aa12.04□□□□□ -0.48
USP8-212ENST00000560730 H3BM21 787 aa12.04□□□□□ -0.48
USP8-212ENST00000560730 CACNB4O00305 520 aaPredicted RBP12.04□□□□□ -0.48
USP8-212ENST00000560730 ENC1O14682 589 aa12.04□□□□□ -0.48
USP8-212ENST00000560730 SLC4A1P02730 911 aa12.04□□□□□ -0.48
USP8-212ENST00000560730 TSHRP16473 764 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms