RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 PTPN7P35236 360 aa15.17■□□□□ 0.02
SNRPA1-210ENST00000560383 ACTN2P35609 894 aa15.17■□□□□ 0.02
SNRPA1-210ENST00000560383 BLKP51451 505 aa15.17■□□□□ 0.02
SNRPA1-210ENST00000560383 PPARDQ03181 441 aa15.17■□□□□ 0.02
SNRPA1-210ENST00000560383 PTPRRQ15256 657 aa15.17■□□□□ 0.02
SNRPA1-210ENST00000560383 ALG11Q2TAA5 492 aa15.17■□□□□ 0.02
SNRPA1-210ENST00000560383 TBC1D25Q3MII6 688 aa15.17■□□□□ 0.02
SNRPA1-210ENST00000560383 TEX44Q53QW1 395 aa15.17■□□□□ 0.02
SNRPA1-210ENST00000560383 PNCKQ6P2M8 343 aa15.17■□□□□ 0.02
SNRPA1-210ENST00000560383 CRTC1Q6UUV9 634 aa15.17■□□□□ 0.02
SNRPA1-210ENST00000560383 LRRC69Q6ZNQ3 347 aa15.17■□□□□ 0.02
SNRPA1-210ENST00000560383 HSD11B1LQ7Z5J1 315 aa15.17■□□□□ 0.02
SNRPA1-210ENST00000560383 TSPAN33Q86UF1 283 aa15.17■□□□□ 0.02
SNRPA1-210ENST00000560383 NLRP8Q86W28 1048 aa15.17■□□□□ 0.02
SNRPA1-210ENST00000560383 RBFAQ8N0V3 343 aa15.17■□□□□ 0.02
SNRPA1-210ENST00000560383 TXLNBQ8N3L3 684 aa15.17■□□□□ 0.02
SNRPA1-210ENST00000560383 ATL2Q8NHH9 583 aa15.17■□□□□ 0.02
SNRPA1-210ENST00000560383 P3H4Q92791 437 aa15.17■□□□□ 0.02
SNRPA1-210ENST00000560383 FGF11Q92914 225 aa15.17■□□□□ 0.02
SNRPA1-210ENST00000560383 FUBP1Q96AE4 644 aaKnown RBP15.17■□□□□ 0.02
SNRPA1-210ENST00000560383 NUS1Q96E22 293 aa15.17■□□□□ 0.02
SNRPA1-210ENST00000560383 IMP4Q96G21 291 aaKnown RBP15.17■□□□□ 0.02
SNRPA1-210ENST00000560383 TEKT5Q96M29 485 aa15.17■□□□□ 0.02
SNRPA1-210ENST00000560383 DCBLD2Q96PD2 775 aa15.17■□□□□ 0.02
SNRPA1-210ENST00000560383 SLC25A51Q9H1U9 297 aa15.17■□□□□ 0.02
SNRPA1-210ENST00000560383 TCEAL2Q9H3H9 227 aaPredicted RBP15.17■□□□□ 0.02
SNRPA1-210ENST00000560383 PCDH9Q9HC56 1237 aa15.17■□□□□ 0.02
SNRPA1-210ENST00000560383 SPASTQ9UBP0 616 aa15.17■□□□□ 0.02
SNRPA1-210ENST00000560383 APOBEC3BQ9UH17 382 aaKnown RBP15.17■□□□□ 0.02
SNRPA1-210ENST00000560383 DNPEPQ9ULA0 475 aa15.17■□□□□ 0.02
SNRPA1-210ENST00000560383 CHKBQ9Y259 395 aa15.17■□□□□ 0.02
SNRPA1-210ENST00000560383 DGKBQ9Y6T7 804 aa15.17■□□□□ 0.02
SNRPA1-210ENST00000560383 KALRNO60229 2985 aa15.17■□□□□ 0.02
SNRPA1-210ENST00000560383 SHROOM3Q8TF72 1996 aa15.16■□□□□ 0.02
SNRPA1-210ENST00000560383 EME2A4GXA9 379 aaPredicted RBP15.16■□□□□ 0.02
SNRPA1-210ENST00000560383 CAPN8A6NHC0 703 aa15.16■□□□□ 0.02
SNRPA1-210ENST00000560383 LMO7DNF2Z398 122 aa15.16■□□□□ 0.02
SNRPA1-210ENST00000560383 TNFRSF10CO14798 259 aa15.16■□□□□ 0.02
SNRPA1-210ENST00000560383 GCATO75600 419 aa15.16■□□□□ 0.02
SNRPA1-210ENST00000560383 DXOO77932 396 aaKnown RBP15.16■□□□□ 0.02
SNRPA1-210ENST00000560383 CTPS1P17812 591 aa15.16■□□□□ 0.02
SNRPA1-210ENST00000560383 ETV3P41162 512 aa15.16■□□□□ 0.02
SNRPA1-210ENST00000560383 CD86P42081 329 aa15.16■□□□□ 0.02
SNRPA1-210ENST00000560383 HK3P52790 923 aa15.16■□□□□ 0.02
SNRPA1-210ENST00000560383 GSDMDP57764 484 aa15.16■□□□□ 0.02
SNRPA1-210ENST00000560383 PTSQ03393 145 aa15.16■□□□□ 0.02
SNRPA1-210ENST00000560383 DPTQ07507 201 aa15.16■□□□□ 0.02
SNRPA1-210ENST00000560383 KIF5AQ12840 1032 aa15.16■□□□□ 0.02
SNRPA1-210ENST00000560383 ARHGEF7Q14155 803 aa15.16■□□□□ 0.02
SNRPA1-210ENST00000560383 LLGL1Q15334 1064 aa15.16■□□□□ 0.02
SNRPA1-210ENST00000560383 SOWAHCQ53LP3 525 aaPredicted RBP15.16■□□□□ 0.02
SNRPA1-210ENST00000560383 PRRT3Q5FWE3 981 aa15.16■□□□□ 0.02
SNRPA1-210ENST00000560383 KAZNQ674X7 775 aa15.16■□□□□ 0.02
SNRPA1-210ENST00000560383 LRRC66Q68CR7 880 aa15.16■□□□□ 0.02
SNRPA1-210ENST00000560383 Q6ZVL8 140 aa15.16■□□□□ 0.02
SNRPA1-210ENST00000560383 KIAA1328Q86T90 577 aa15.16■□□□□ 0.02
SNRPA1-210ENST00000560383 NT5DC3Q86UY8 548 aa15.16■□□□□ 0.02
SNRPA1-210ENST00000560383 PELI3Q8N2H9 469 aa15.16■□□□□ 0.02
SNRPA1-210ENST00000560383 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.16■□□□□ 0.02
SNRPA1-210ENST00000560383 IFI44Q8TCB0 444 aa15.16■□□□□ 0.02
SNRPA1-210ENST00000560383 LMX1AQ8TE12 382 aa15.16■□□□□ 0.02
SNRPA1-210ENST00000560383 TFB1MQ8WVM0 346 aaKnown RBP15.16■□□□□ 0.02
SNRPA1-210ENST00000560383 GLMNQ92990 594 aa15.16■□□□□ 0.02
SNRPA1-210ENST00000560383 GRAMD1AQ96CP6 724 aa15.16■□□□□ 0.02
SNRPA1-210ENST00000560383 WDR92Q96MX6 357 aa15.16■□□□□ 0.02
SNRPA1-210ENST00000560383 SMIM14Q96QK8 99 aa15.16■□□□□ 0.02
SNRPA1-210ENST00000560383 TRIB3Q96RU7 358 aa15.16■□□□□ 0.02
SNRPA1-210ENST00000560383 LRRC61Q9BV99 259 aa15.16■□□□□ 0.02
SNRPA1-210ENST00000560383 BOCQ9BWV1 1114 aa15.16■□□□□ 0.02
SNRPA1-210ENST00000560383 TEX101Q9BY14 249 aa15.16■□□□□ 0.02
SNRPA1-210ENST00000560383 SLC13A1Q9BZW2 595 aa15.16■□□□□ 0.02
SNRPA1-210ENST00000560383 GOLGA6L6A8MZA4 724 aa15.15■□□□□ 0.02
SNRPA1-210ENST00000560383 ANKRD66B4E2M5 251 aa15.15■□□□□ 0.02
SNRPA1-210ENST00000560383 APOC4-APOC2K7ER74 178 aa15.15■□□□□ 0.02
SNRPA1-210ENST00000560383 CACNB4O00305 520 aaPredicted RBP15.15■□□□□ 0.02
SNRPA1-210ENST00000560383 MTSS1O43312 755 aa15.15■□□□□ 0.02
SNRPA1-210ENST00000560383 RASGRP1O95267 797 aa15.15■□□□□ 0.02
SNRPA1-210ENST00000560383 APOC2P02655 101 aa15.15■□□□□ 0.02
SNRPA1-210ENST00000560383 TSHRP16473 764 aa15.15■□□□□ 0.02
SNRPA1-210ENST00000560383 KELP23276 732 aa15.15■□□□□ 0.02
SNRPA1-210ENST00000560383 PTPN3P26045 913 aa15.15■□□□□ 0.02
SNRPA1-210ENST00000560383 RPIAP49247 311 aa15.15■□□□□ 0.02
SNRPA1-210ENST00000560383 STC1P52823 247 aa15.15■□□□□ 0.02
SNRPA1-210ENST00000560383 EPHB1P54762 984 aa15.15■□□□□ 0.02
SNRPA1-210ENST00000560383 NAP1L1P55209 391 aaKnown RBP15.15■□□□□ 0.02
SNRPA1-210ENST00000560383 RWDD2BP57060 319 aa15.15■□□□□ 0.02
SNRPA1-210ENST00000560383 SRP54P61011 504 aaKnown RBP15.15■□□□□ 0.02
SNRPA1-210ENST00000560383 WASHC5Q12768 1159 aa15.15■□□□□ 0.02
SNRPA1-210ENST00000560383 XRCC4Q13426 336 aa15.15■□□□□ 0.02
SNRPA1-210ENST00000560383 COL9A2Q14055 689 aaPredicted RBP15.15■□□□□ 0.02
SNRPA1-210ENST00000560383 CDKN3Q16667 212 aa15.15■□□□□ 0.02
SNRPA1-210ENST00000560383 QPCTQ16769 361 aa15.15■□□□□ 0.02
SNRPA1-210ENST00000560383 C6orf132Q5T0Z8 1188 aa15.15■□□□□ 0.02
SNRPA1-210ENST00000560383 FAXCQ5TGI0 409 aa15.15■□□□□ 0.02
SNRPA1-210ENST00000560383 IGF2-ASQ6U949 168 aa15.15■□□□□ 0.02
SNRPA1-210ENST00000560383 ENPP7Q6UWV6 458 aa15.15■□□□□ 0.02
SNRPA1-210ENST00000560383 ZNF765Q7L2R6 523 aa15.15■□□□□ 0.02
SNRPA1-210ENST00000560383 CCDC50Q8IVM0 306 aa15.15■□□□□ 0.02
SNRPA1-210ENST00000560383 LSMEM2Q8N112 164 aa15.15■□□□□ 0.02
SNRPA1-210ENST00000560383 SDR16C5Q8N3Y7 309 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms