RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 MED13LQ71F56 2210 aa12.8□□□□□ -0.36
RABGGTA-213ENST00000560127 SPTBP11277 2137 aa12.79□□□□□ -0.36
RABGGTA-213ENST00000560127 ZGRF1Q86YA3 2104 aa12.79□□□□□ -0.36
RABGGTA-213ENST00000560127 PPP1R3GB7ZBB8 358 aa12.79□□□□□ -0.36
RABGGTA-213ENST00000560127 FOXN3O00409 490 aaPredicted RBP12.79□□□□□ -0.36
RABGGTA-213ENST00000560127 RFPL1O75677 317 aa12.79□□□□□ -0.36
RABGGTA-213ENST00000560127 PLEKP08567 350 aaPredicted RBP12.79□□□□□ -0.36
RABGGTA-213ENST00000560127 MAN1A1P33908 653 aa12.79□□□□□ -0.36
RABGGTA-213ENST00000560127 MAP7Q14244 749 aa12.79□□□□□ -0.36
RABGGTA-213ENST00000560127 ERV3-1Q14264 604 aa12.79□□□□□ -0.36
RABGGTA-213ENST00000560127 CDO1Q16878 200 aa12.79□□□□□ -0.36
RABGGTA-213ENST00000560127 C15orf59Q2T9L4 293 aaPredicted RBP12.79□□□□□ -0.36
RABGGTA-213ENST00000560127 CFAP58Q5T655 872 aa12.79□□□□□ -0.36
RABGGTA-213ENST00000560127 DPPA4Q7L190 304 aa12.79□□□□□ -0.36
RABGGTA-213ENST00000560127 ARCQ7LC44 396 aa12.79□□□□□ -0.36
RABGGTA-213ENST00000560127 PHLDB2Q86SQ0 1253 aa12.79□□□□□ -0.36
RABGGTA-213ENST00000560127 TMEM135Q86UB9 458 aa12.79□□□□□ -0.36
RABGGTA-213ENST00000560127 ESX1Q8N693 406 aa12.79□□□□□ -0.36
RABGGTA-213ENST00000560127 RTL3Q8N8U3 475 aaKnown RBP12.79□□□□□ -0.36
RABGGTA-213ENST00000560127 FRMD8Q9BZ67 464 aaPredicted RBP12.79□□□□□ -0.36
RABGGTA-213ENST00000560127 CASS4Q9NQ75 786 aa12.79□□□□□ -0.36
RABGGTA-213ENST00000560127 CTNND2Q9UQB3 1225 aa12.79□□□□□ -0.36
RABGGTA-213ENST00000560127 POLHQ9Y253 713 aa12.79□□□□□ -0.36
RABGGTA-213ENST00000560127 PLEKHM1Q9Y4G2 1056 aa12.79□□□□□ -0.36
RABGGTA-213ENST00000560127 MAP4K5Q9Y4K4 846 aa12.79□□□□□ -0.36
RABGGTA-213ENST00000560127 CNTRLQ7Z7A1 2325 aa12.78□□□□□ -0.36
RABGGTA-213ENST00000560127 BICDL2A1A5D9 508 aa12.78□□□□□ -0.36
RABGGTA-213ENST00000560127 A8MX80 341 aa12.78□□□□□ -0.36
RABGGTA-213ENST00000560127 RASA4BC9J798 803 aa12.78□□□□□ -0.36
RABGGTA-213ENST00000560127 RASA4O43374 803 aa12.78□□□□□ -0.36
RABGGTA-213ENST00000560127 DLSTP36957 453 aa12.78□□□□□ -0.36
RABGGTA-213ENST00000560127 ADCY8P40145 1251 aa12.78□□□□□ -0.36
RABGGTA-213ENST00000560127 PPP1R2P41236 205 aa12.78□□□□□ -0.36
RABGGTA-213ENST00000560127 RGRP47804 291 aa12.78□□□□□ -0.36
RABGGTA-213ENST00000560127 PMS2P54278 862 aa12.78□□□□□ -0.36
RABGGTA-213ENST00000560127 STX17P56962 302 aa12.78□□□□□ -0.36
RABGGTA-213ENST00000560127 RIPPLY3P57055 190 aa12.78□□□□□ -0.36
RABGGTA-213ENST00000560127 CCDC185Q8N715 623 aa12.78□□□□□ -0.36
RABGGTA-213ENST00000560127 ECHDC3Q96DC8 303 aa12.78□□□□□ -0.36
RABGGTA-213ENST00000560127 RNF31Q96EP0 1072 aa12.78□□□□□ -0.36
RABGGTA-213ENST00000560127 AHCYL2Q96HN2 611 aaKnown RBP12.78□□□□□ -0.36
RABGGTA-213ENST00000560127 TUBGCP5Q96RT8 1024 aa12.78□□□□□ -0.36
RABGGTA-213ENST00000560127 TEX101Q9BY14 249 aa12.78□□□□□ -0.36
RABGGTA-213ENST00000560127 ZMYND15Q9H091 742 aa12.78□□□□□ -0.36
RABGGTA-213ENST00000560127 SIX2Q9NPC8 291 aa12.78□□□□□ -0.36
RABGGTA-213ENST00000560127 PHPT1Q9NRX4 125 aaPredicted RBP12.78□□□□□ -0.36
RABGGTA-213ENST00000560127 CROTQ9UKG9 612 aa12.78□□□□□ -0.36
RABGGTA-213ENST00000560127 PCDHB3Q9Y5E6 796 aa12.78□□□□□ -0.36
RABGGTA-213ENST00000560127 CSMD2Q7Z408 3487 aa12.78□□□□□ -0.36
RABGGTA-213ENST00000560127 NF1P21359 2839 aa12.77□□□□□ -0.36
RABGGTA-213ENST00000560127 WIPF3A6NGB9 483 aa12.77□□□□□ -0.37
RABGGTA-213ENST00000560127 DNAJB5O75953 348 aa12.77□□□□□ -0.37
RABGGTA-213ENST00000560127 ELAVL4P26378 380 aaKnown RBP12.77□□□□□ -0.37
RABGGTA-213ENST00000560127 PON1P27169 355 aa12.77□□□□□ -0.37
RABGGTA-213ENST00000560127 ACTR1BP42025 376 aa12.77□□□□□ -0.37
RABGGTA-213ENST00000560127 FASLGP48023 281 aa12.77□□□□□ -0.37
RABGGTA-213ENST00000560127 POLD2P49005 469 aa12.77□□□□□ -0.37
RABGGTA-213ENST00000560127 YBEYP58557 167 aaPredicted RBP12.77□□□□□ -0.37
RABGGTA-213ENST00000560127 ACTR1AP61163 376 aa12.77□□□□□ -0.37
RABGGTA-213ENST00000560127 CDK3Q00526 305 aa12.77□□□□□ -0.37
RABGGTA-213ENST00000560127 ACOX1Q15067 660 aa12.77□□□□□ -0.37
RABGGTA-213ENST00000560127 EIF2S3LQ2VIR3 472 aaKnown RBP12.77□□□□□ -0.37
RABGGTA-213ENST00000560127 CCDC14Q49A88 953 aa12.77□□□□□ -0.37
RABGGTA-213ENST00000560127 NADK2Q4G0N4 442 aa12.77□□□□□ -0.37
RABGGTA-213ENST00000560127 SMYD5Q6GMV2 418 aa12.77□□□□□ -0.37
RABGGTA-213ENST00000560127 WDR74Q6RFH5 385 aaPredicted RBP12.77□□□□□ -0.37
RABGGTA-213ENST00000560127 GBP6Q6ZN66 633 aa12.77□□□□□ -0.37
RABGGTA-213ENST00000560127 FAM71AQ8IYT1 594 aa12.77□□□□□ -0.37
RABGGTA-213ENST00000560127 OR10G6Q8NH81 332 aa12.77□□□□□ -0.37
RABGGTA-213ENST00000560127 GPT2Q8TD30 523 aa12.77□□□□□ -0.37
RABGGTA-213ENST00000560127 RXFP2Q8WXD0 754 aa12.77□□□□□ -0.37
RABGGTA-213ENST00000560127 COQ10AQ96MF6 247 aa12.77□□□□□ -0.37
RABGGTA-213ENST00000560127 SLC38A3Q99624 504 aa12.77□□□□□ -0.37
RABGGTA-213ENST00000560127 TRIM55Q9BYV6 548 aa12.77□□□□□ -0.37
RABGGTA-213ENST00000560127 PDCL3Q9H2J4 239 aa12.77□□□□□ -0.37
RABGGTA-213ENST00000560127 PDFQ9HBH1 243 aa12.77□□□□□ -0.37
RABGGTA-213ENST00000560127 METTL5Q9NRN9 209 aaKnown RBP12.77□□□□□ -0.37
RABGGTA-213ENST00000560127 UBA2Q9UBT2 640 aaPredicted RBP12.77□□□□□ -0.37
RABGGTA-213ENST00000560127 DNAJC12Q9UKB3 198 aa12.77□□□□□ -0.37
RABGGTA-213ENST00000560127 SLC17A4Q9Y2C5 497 aa12.77□□□□□ -0.37
RABGGTA-213ENST00000560127 OAS3Q9Y6K5 1087 aaKnown RBP12.77□□□□□ -0.37
RABGGTA-213ENST00000560127 NAV3Q8IVL0 2385 aa12.77□□□□□ -0.37
RABGGTA-213ENST00000560127 PIKFYVEQ9Y2I7 2098 aa12.76□□□□□ -0.37
RABGGTA-213ENST00000560127 PKDREJQ9NTG1 2253 aa12.76□□□□□ -0.37
RABGGTA-213ENST00000560127 TRBV23OR9-2A0A075B6M9 112 aa12.76□□□□□ -0.37
RABGGTA-213ENST00000560127 CDC14CA4D256 554 aa12.76□□□□□ -0.37
RABGGTA-213ENST00000560127 TCP11X1B4DZS4 312 aa12.76□□□□□ -0.37
RABGGTA-213ENST00000560127 BIN1O00499 593 aa12.76□□□□□ -0.37
RABGGTA-213ENST00000560127 POLR1CO15160 346 aaPredicted RBP12.76□□□□□ -0.37
RABGGTA-213ENST00000560127 SORBS2O94875 1100 aaKnown RBP12.76□□□□□ -0.37
RABGGTA-213ENST00000560127 IVLP07476 585 aa12.76□□□□□ -0.37
RABGGTA-213ENST00000560127 ZNF28P17035 718 aa12.76□□□□□ -0.37
RABGGTA-213ENST00000560127 ERCC5P28715 1186 aaPredicted RBP12.76□□□□□ -0.37
RABGGTA-213ENST00000560127 EPHB2P29323 1055 aa12.76□□□□□ -0.37
RABGGTA-213ENST00000560127 PPM1FP49593 454 aaPredicted RBP12.76□□□□□ -0.37
RABGGTA-213ENST00000560127 MRPL49Q13405 166 aaKnown RBP12.76□□□□□ -0.37
RABGGTA-213ENST00000560127 PEX6Q13608 980 aa12.76□□□□□ -0.37
RABGGTA-213ENST00000560127 CAMK4Q16566 473 aa12.76□□□□□ -0.37
RABGGTA-213ENST00000560127 EXOC3L4Q17RC7 722 aa12.76□□□□□ -0.37
RABGGTA-213ENST00000560127 PARP15Q460N3 678 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms