RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 SLC14A1Q13336 389 aa16.81■□□□□ 0.28
RPL28-209ENST00000560055 OLIG2Q13516 323 aa16.81■□□□□ 0.28
RPL28-209ENST00000560055 FZD2Q14332 565 aa16.81■□□□□ 0.28
RPL28-209ENST00000560055 INPP5AQ14642 412 aa16.81■□□□□ 0.28
RPL28-209ENST00000560055 PRAMEF14Q5SWL7 426 aa16.81■□□□□ 0.28
RPL28-209ENST00000560055 CCDC70Q6NSX1 233 aa16.81■□□□□ 0.28
RPL28-209ENST00000560055 DBX2Q6ZNG2 339 aa16.81■□□□□ 0.28
RPL28-209ENST00000560055 ZNF765Q7L2R6 523 aa16.81■□□□□ 0.28
RPL28-209ENST00000560055 NLRP8Q86W28 1048 aa16.81■□□□□ 0.28
RPL28-209ENST00000560055 NRSN1Q8IZ57 195 aa16.81■□□□□ 0.28
RPL28-209ENST00000560055 OXR1Q8N573 874 aa16.81■□□□□ 0.28
RPL28-209ENST00000560055 SRPK1Q96SB4 655 aaKnown RBP16.81■□□□□ 0.28
RPL28-209ENST00000560055 NAP1L3Q99457 506 aaPredicted RBP16.81■□□□□ 0.28
RPL28-209ENST00000560055 NAPGQ99747 312 aaPredicted RBP16.81■□□□□ 0.28
RPL28-209ENST00000560055 FICDQ9BVA6 458 aa16.81■□□□□ 0.28
RPL28-209ENST00000560055 ZFYVE1Q9HBF4 777 aa16.81■□□□□ 0.28
RPL28-209ENST00000560055 TM7SF3Q9NS93 570 aa16.81■□□□□ 0.28
RPL28-209ENST00000560055 ZNF711Q9Y462 761 aa16.81■□□□□ 0.28
RPL28-209ENST00000560055 PCDHGB2Q9Y5G2 931 aa16.81■□□□□ 0.28
RPL28-209ENST00000560055 BPTFQ12830 3046 aa16.81■□□□□ 0.28
RPL28-209ENST00000560055 RGSL1A5PLK6 1076 aa16.8■□□□□ 0.28
RPL28-209ENST00000560055 GOLGA8CPA6NN73 597 aa16.8■□□□□ 0.28
RPL28-209ENST00000560055 PCDHGA12O60330 932 aa16.8■□□□□ 0.28
RPL28-209ENST00000560055 SOD1P00441 154 aa16.8■□□□□ 0.28
RPL28-209ENST00000560055 HOXC4P09017 264 aaPredicted RBP16.8■□□□□ 0.28
RPL28-209ENST00000560055 CD59P13987 128 aa16.8■□□□□ 0.28
RPL28-209ENST00000560055 TEAD1P28347 426 aa16.8■□□□□ 0.28
RPL28-209ENST00000560055 TNNT3P45378 269 aaPredicted RBP16.8■□□□□ 0.28
RPL28-209ENST00000560055 KCNJ1P48048 391 aa16.8■□□□□ 0.28
RPL28-209ENST00000560055 SPINT3P49223 89 aa16.8■□□□□ 0.28
RPL28-209ENST00000560055 MSLNQ13421 630 aaPredicted RBP16.8■□□□□ 0.28
RPL28-209ENST00000560055 PDE1CQ14123 709 aaPredicted RBP16.8■□□□□ 0.28
RPL28-209ENST00000560055 FAXCQ5TGI0 409 aa16.8■□□□□ 0.28
RPL28-209ENST00000560055 DENND5AQ6IQ26 1287 aa16.8■□□□□ 0.28
RPL28-209ENST00000560055 PNCKQ6P2M8 343 aa16.8■□□□□ 0.28
RPL28-209ENST00000560055 TMC3Q7Z5M5 1100 aa16.8■□□□□ 0.28
RPL28-209ENST00000560055 PRUNE1Q86TP1 453 aa16.8■□□□□ 0.28
RPL28-209ENST00000560055 SLC25A41Q8N5S1 370 aa16.8■□□□□ 0.28
RPL28-209ENST00000560055 APOOQ9BUR5 198 aa16.8■□□□□ 0.28
RPL28-209ENST00000560055 ABCG8Q9H221 673 aa16.8■□□□□ 0.28
RPL28-209ENST00000560055 TRABDQ9H4I3 376 aa16.8■□□□□ 0.28
RPL28-209ENST00000560055 ARNT2Q9HBZ2 717 aa16.8■□□□□ 0.28
RPL28-209ENST00000560055 SHOC2Q9UQ13 582 aa16.8■□□□□ 0.28
RPL28-209ENST00000560055 OR1A2Q9Y585 309 aa16.8■□□□□ 0.28
RPL28-209ENST00000560055 CTAGE9A4FU28 777 aa16.79■□□□□ 0.28
RPL28-209ENST00000560055 GOLGA6CA6NDK9 693 aa16.79■□□□□ 0.28
RPL28-209ENST00000560055 GOLGA6BA6NDN3 693 aa16.79■□□□□ 0.28
RPL28-209ENST00000560055 AURKAO14965 403 aa16.79■□□□□ 0.28
RPL28-209ENST00000560055 YKT6O15498 198 aa16.79■□□□□ 0.28
RPL28-209ENST00000560055 AP2A1O95782 977 aa16.79■□□□□ 0.28
RPL28-209ENST00000560055 GOLGA6DP0CG33 693 aa16.79■□□□□ 0.28
RPL28-209ENST00000560055 ETS1P14921 441 aa16.79■□□□□ 0.28
RPL28-209ENST00000560055 TSHRP16473 764 aa16.79■□□□□ 0.28
RPL28-209ENST00000560055 CCT8P50990 548 aa16.79■□□□□ 0.28
RPL28-209ENST00000560055 KIAA1024LP59773 190 aa16.79■□□□□ 0.28
RPL28-209ENST00000560055 UAP1L1Q3KQV9 507 aa16.79■□□□□ 0.28
RPL28-209ENST00000560055 TTC27Q6P3X3 843 aa16.79■□□□□ 0.28
RPL28-209ENST00000560055 MACC1Q6ZN28 852 aa16.79■□□□□ 0.28
RPL28-209ENST00000560055 KANSL1Q7Z3B3 1105 aa16.79■□□□□ 0.28
RPL28-209ENST00000560055 PIP4P1Q86T03 277 aa16.79■□□□□ 0.28
RPL28-209ENST00000560055 PARGQ86W56 976 aa16.79■□□□□ 0.28
RPL28-209ENST00000560055 TTC30BQ8N4P2 665 aa16.79■□□□□ 0.28
RPL28-209ENST00000560055 CCDC89Q8N998 374 aa16.79■□□□□ 0.28
RPL28-209ENST00000560055 CCHCR1Q8TD31 782 aa16.79■□□□□ 0.28
RPL28-209ENST00000560055 SCAMP4Q969E2 229 aa16.79■□□□□ 0.28
RPL28-209ENST00000560055 FUBP1Q96AE4 644 aaKnown RBP16.79■□□□□ 0.28
RPL28-209ENST00000560055 AP2M1Q96CW1 435 aa16.79■□□□□ 0.28
RPL28-209ENST00000560055 TBL1YQ9BQ87 522 aa16.79■□□□□ 0.28
RPL28-209ENST00000560055 APOL2Q9BQE5 337 aa16.79■□□□□ 0.28
RPL28-209ENST00000560055 AP1M1Q9BXS5 423 aa16.79■□□□□ 0.28
RPL28-209ENST00000560055 GOLGA6AQ9NYA3 693 aa16.79■□□□□ 0.28
RPL28-209ENST00000560055 NFKBIL1Q9UBC1 381 aaPredicted RBP16.79■□□□□ 0.28
RPL28-209ENST00000560055 PNMA8BQ9ULN7 279 aaPredicted RBP16.79■□□□□ 0.28
RPL28-209ENST00000560055 CSF2P04141 144 aa16.78■□□□□ 0.28
RPL28-209ENST00000560055 ZSCAN5DPP0CG00 497 aa16.78■□□□□ 0.28
RPL28-209ENST00000560055 NME1P15531 152 aaKnown RBP16.78■□□□□ 0.28
RPL28-209ENST00000560055 EPHA8P29322 1005 aaPredicted RBP16.78■□□□□ 0.28
RPL28-209ENST00000560055 RPL22P35268 128 aaKnown RBP16.78■□□□□ 0.28
RPL28-209ENST00000560055 HMGCLP35914 325 aa16.78■□□□□ 0.28
RPL28-209ENST00000560055 FDFT1P37268 417 aa16.78■□□□□ 0.28
RPL28-209ENST00000560055 ARRB1P49407 418 aaPredicted RBP16.78■□□□□ 0.28
RPL28-209ENST00000560055 THOP1P52888 689 aa16.78■□□□□ 0.28
RPL28-209ENST00000560055 DCDC1P59894 354 aa16.78■□□□□ 0.28
RPL28-209ENST00000560055 EIF2B5Q13144 721 aaKnown RBP16.78■□□□□ 0.28
RPL28-209ENST00000560055 SEMA5AQ13591 1074 aa16.78■□□□□ 0.28
RPL28-209ENST00000560055 PTK2BQ14289 1009 aa16.78■□□□□ 0.28
RPL28-209ENST00000560055 SPARCL1Q14515 664 aa16.78■□□□□ 0.28
RPL28-209ENST00000560055 NFATC4Q14934 902 aa16.78■□□□□ 0.28
RPL28-209ENST00000560055 HS1BP3Q53T59 392 aa16.78■□□□□ 0.28
RPL28-209ENST00000560055 PPM1JQ5JR12 505 aa16.78■□□□□ 0.28
RPL28-209ENST00000560055 HENMT1Q5T8I9 393 aaKnown RBP16.78■□□□□ 0.28
RPL28-209ENST00000560055 CREG2Q8IUH2 290 aa16.78■□□□□ 0.28
RPL28-209ENST00000560055 PDCD7Q8N8D1 485 aaKnown RBP16.78■□□□□ 0.28
RPL28-209ENST00000560055 SAP25Q8TEE9 199 aa16.78■□□□□ 0.28
RPL28-209ENST00000560055 MAGOHBQ96A72 148 aaKnown RBP16.78■□□□□ 0.28
RPL28-209ENST00000560055 TEX101Q9BY14 249 aa16.78■□□□□ 0.28
RPL28-209ENST00000560055 GPR63Q9BZJ6 419 aa16.78■□□□□ 0.28
RPL28-209ENST00000560055 WDR26Q9H7D7 661 aa16.78■□□□□ 0.28
RPL28-209ENST00000560055 CAAP1Q9H8G2 361 aa16.78■□□□□ 0.28
RPL28-209ENST00000560055 LRRC40Q9H9A6 602 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms