RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 F5H423 210 aaPredicted RBP8.18□□□□□ -1.1
SNX1-207ENST00000559401 H7C0C1 242 aa8.18□□□□□ -1.1
SNX1-207ENST00000559401 TPP1O14773 563 aa8.18□□□□□ -1.1
SNX1-207ENST00000559401 YY2O15391 372 aa8.18□□□□□ -1.1
SNX1-207ENST00000559401 PMPCBO75439 489 aa8.18□□□□□ -1.1
SNX1-207ENST00000559401 CLDN7O95471 211 aa8.18□□□□□ -1.1
SNX1-207ENST00000559401 MYCLP1P12525 358 aaPredicted RBP8.18□□□□□ -1.1
SNX1-207ENST00000559401 ZNF30P17039 623 aa8.18□□□□□ -1.1
SNX1-207ENST00000559401 CTNNA2P26232 953 aa8.18□□□□□ -1.1
SNX1-207ENST00000559401 CETN2P41208 172 aa8.18□□□□□ -1.1
SNX1-207ENST00000559401 ATP5OP48047 213 aa8.18□□□□□ -1.1
SNX1-207ENST00000559401 NR2C2P49116 596 aa8.18□□□□□ -1.1
SNX1-207ENST00000559401 RPL26P61254 145 aaKnown RBP8.18□□□□□ -1.1
SNX1-207ENST00000559401 SKOR1P84550 965 aa8.18□□□□□ -1.1
SNX1-207ENST00000559401 E2F1Q01094 437 aa8.18□□□□□ -1.1
SNX1-207ENST00000559401 INSM1Q01101 510 aaPredicted RBP8.18□□□□□ -1.1
SNX1-207ENST00000559401 KIF5AQ12840 1032 aa8.18□□□□□ -1.1
SNX1-207ENST00000559401 TARDBPQ13148 414 aaKnown RBP eCLIP8.18□□□□□ -1.1
SNX1-207ENST00000559401 IHHQ14623 411 aa8.18□□□□□ -1.1
SNX1-207ENST00000559401 C6orf132Q5T0Z8 1188 aa8.18□□□□□ -1.1
SNX1-207ENST00000559401 CCDC70Q6NSX1 233 aa8.18□□□□□ -1.1
SNX1-207ENST00000559401 GUSBP11Q6P575 273 aa8.18□□□□□ -1.1
SNX1-207ENST00000559401 RFLNAQ6ZTI6 216 aa8.18□□□□□ -1.1
SNX1-207ENST00000559401 TAF8Q7Z7C8 310 aa8.18□□□□□ -1.1
SNX1-207ENST00000559401 NT5DC3Q86UY8 548 aa8.18□□□□□ -1.1
SNX1-207ENST00000559401 SLC35F3Q8IY50 421 aa8.18□□□□□ -1.1
SNX1-207ENST00000559401 CNTD1Q8N815 330 aa8.18□□□□□ -1.1
SNX1-207ENST00000559401 PDCD7Q8N8D1 485 aaKnown RBP8.18□□□□□ -1.1
SNX1-207ENST00000559401 FAM181AQ8N9Y4 354 aa8.18□□□□□ -1.1
SNX1-207ENST00000559401 MDM1Q8TC05 714 aa8.18□□□□□ -1.1
SNX1-207ENST00000559401 CCHCR1Q8TD31 782 aa8.18□□□□□ -1.1
SNX1-207ENST00000559401 OR1E3Q8WZA6 343 aa8.18□□□□□ -1.1
SNX1-207ENST00000559401 SCAMP4Q969E2 229 aa8.18□□□□□ -1.1
SNX1-207ENST00000559401 NXPE2Q96DL1 559 aa8.18□□□□□ -1.1
SNX1-207ENST00000559401 CALR3Q96L12 384 aaKnown RBP8.18□□□□□ -1.1
SNX1-207ENST00000559401 TBATAQ96M53 351 aa8.18□□□□□ -1.1
SNX1-207ENST00000559401 MLPHQ9BV36 600 aaPredicted RBP8.18□□□□□ -1.1
SNX1-207ENST00000559401 LGR4Q9BXB1 951 aa8.18□□□□□ -1.1
SNX1-207ENST00000559401 LACRTQ9GZZ8 138 aa8.18□□□□□ -1.1
SNX1-207ENST00000559401 CLPBQ9H078 707 aa8.18□□□□□ -1.1
SNX1-207ENST00000559401 ABCG8Q9H221 673 aa8.18□□□□□ -1.1
SNX1-207ENST00000559401 CARS2Q9HA77 564 aaKnown RBP8.18□□□□□ -1.1
SNX1-207ENST00000559401 USP29Q9HBJ7 922 aa8.18□□□□□ -1.1
SNX1-207ENST00000559401 UBP1Q9NZI7 540 aa8.18□□□□□ -1.1
SNX1-207ENST00000559401 PKD2L2Q9NZM6 624 aa8.18□□□□□ -1.1
SNX1-207ENST00000559401 KLHL8Q9P2G9 620 aaPredicted RBP8.18□□□□□ -1.1
SNX1-207ENST00000559401 RPL26L1Q9UNX3 145 aaKnown RBP8.18□□□□□ -1.1
SNX1-207ENST00000559401 GPR34Q9UPC5 381 aa8.18□□□□□ -1.1
SNX1-207ENST00000559401 CLCA2Q9UQC9 943 aa8.18□□□□□ -1.1
SNX1-207ENST00000559401 REXO2Q9Y3B8 237 aaKnown RBP8.18□□□□□ -1.1
SNX1-207ENST00000559401 PPIL1Q9Y3C6 166 aa8.18□□□□□ -1.1
SNX1-207ENST00000559401 AK5Q9Y6K8 562 aa8.18□□□□□ -1.1
SNX1-207ENST00000559401 DUSP10Q9Y6W6 482 aa8.18□□□□□ -1.1
SNX1-207ENST00000559401 AKAP13Q12802 2813 aa8.18□□□□□ -1.1
SNX1-207ENST00000559401 CCDC66A2RUB6 948 aa8.17□□□□□ -1.1
SNX1-207ENST00000559401 B4DGG1 531 aa8.17□□□□□ -1.1
SNX1-207ENST00000559401 ANKRD66B4E2M5 251 aa8.17□□□□□ -1.1
SNX1-207ENST00000559401 TNFRSF10CO14798 259 aa8.17□□□□□ -1.1
SNX1-207ENST00000559401 INPP4BO15327 924 aa8.17□□□□□ -1.1
SNX1-207ENST00000559401 MTSS1O43312 755 aa8.17□□□□□ -1.1
SNX1-207ENST00000559401 OPA1O60313 960 aa8.17□□□□□ -1.1
SNX1-207ENST00000559401 ASMTLO95671 621 aa8.17□□□□□ -1.1
SNX1-207ENST00000559401 MT-CYBP00156 380 aaPredicted RBP8.17□□□□□ -1.1
SNX1-207ENST00000559401 MT-CO3P00414 261 aa8.17□□□□□ -1.1
SNX1-207ENST00000559401 PRLP01236 227 aa8.17□□□□□ -1.1
SNX1-207ENST00000559401 GP1BAP07359 652 aa8.17□□□□□ -1.1
SNX1-207ENST00000559401 MMP2P08253 660 aa8.17□□□□□ -1.1
SNX1-207ENST00000559401 PIRTP0C851 137 aa8.17□□□□□ -1.1
SNX1-207ENST00000559401 NFKB1P19838 968 aa8.17□□□□□ -1.1
SNX1-207ENST00000559401 PTPN3P26045 913 aa8.17□□□□□ -1.1
SNX1-207ENST00000559401 CTNNA1P35221 906 aaKnown RBP8.17□□□□□ -1.1
SNX1-207ENST00000559401 TRIM23P36406 574 aa8.17□□□□□ -1.1
SNX1-207ENST00000559401 GNPDA1P46926 289 aa8.17□□□□□ -1.1
SNX1-207ENST00000559401 STC1P52823 247 aa8.17□□□□□ -1.1
SNX1-207ENST00000559401 RWDD2BP57060 319 aa8.17□□□□□ -1.1
SNX1-207ENST00000559401 CDK3Q00526 305 aa8.17□□□□□ -1.1
SNX1-207ENST00000559401 ADCY2Q08462 1091 aa8.17□□□□□ -1.1
SNX1-207ENST00000559401 CYP4F3Q08477 520 aa8.17□□□□□ -1.1
SNX1-207ENST00000559401 PRKD1Q15139 912 aaPredicted RBP8.17□□□□□ -1.1
SNX1-207ENST00000559401 PPP2R5EQ16537 467 aa8.17□□□□□ -1.1
SNX1-207ENST00000559401 QPCTQ16769 361 aa8.17□□□□□ -1.1
SNX1-207ENST00000559401 TEX44Q53QW1 395 aa8.17□□□□□ -1.1
SNX1-207ENST00000559401 KCTD16Q68DU8 428 aa8.17□□□□□ -1.1
SNX1-207ENST00000559401 BBS12Q6ZW61 710 aa8.17□□□□□ -1.1
SNX1-207ENST00000559401 MARK2Q7KZI7 788 aaKnown RBP8.17□□□□□ -1.1
SNX1-207ENST00000559401 PID1Q7Z2X4 250 aa8.17□□□□□ -1.1
SNX1-207ENST00000559401 LYSMD3Q7Z3D4 306 aa8.17□□□□□ -1.1
SNX1-207ENST00000559401 PEX26Q7Z412 305 aa8.17□□□□□ -1.1
SNX1-207ENST00000559401 TRIM74Q86UV6 250 aa8.17□□□□□ -1.1
SNX1-207ENST00000559401 ARL10Q8N8L6 244 aa8.17□□□□□ -1.1
SNX1-207ENST00000559401 KDF1Q8NAX2 398 aaPredicted RBP8.17□□□□□ -1.1
SNX1-207ENST00000559401 KYQ8NBH2 561 aa8.17□□□□□ -1.1
SNX1-207ENST00000559401 FAM46DQ8NEK8 389 aa8.17□□□□□ -1.1
SNX1-207ENST00000559401 SPATA22Q8NHS9 363 aa8.17□□□□□ -1.1
SNX1-207ENST00000559401 NAT6Q93015 286 aa8.17□□□□□ -1.1
SNX1-207ENST00000559401 IMP4Q96G21 291 aaKnown RBP8.17□□□□□ -1.1
SNX1-207ENST00000559401 QKIQ96PU8 341 aaKnown RBP eCLIP8.17□□□□□ -1.1
SNX1-207ENST00000559401 DEPDC7Q96QD5 511 aa8.17□□□□□ -1.1
SNX1-207ENST00000559401 FERMT1Q9BQL6 677 aa8.17□□□□□ -1.1
SNX1-207ENST00000559401 RIOK2Q9BVS4 552 aaKnown RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms