RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 CBARPQ8N350 705 aaPredicted RBP14.92□□□□□ -0.02
LRRC28-213ENST00000559399 TEX26Q8N6G2 289 aa14.92□□□□□ -0.02
LRRC28-213ENST00000559399 GPBAR1Q8TDU6 330 aa14.92□□□□□ -0.02
LRRC28-213ENST00000559399 IQCDQ96DY2 449 aa14.92□□□□□ -0.02
LRRC28-213ENST00000559399 SEMA3CQ99985 751 aa14.92□□□□□ -0.02
LRRC28-213ENST00000559399 FRMD8Q9BZ67 464 aaPredicted RBP14.92□□□□□ -0.02
LRRC28-213ENST00000559399 POLR1EQ9GZS1 481 aaKnown RBP14.92□□□□□ -0.02
LRRC28-213ENST00000559399 CBX8Q9HC52 389 aa14.92□□□□□ -0.02
LRRC28-213ENST00000559399 NT5MQ9NPB1 228 aa14.92□□□□□ -0.02
LRRC28-213ENST00000559399 TRNAU1APQ9NX07 287 aaKnown RBP14.92□□□□□ -0.02
LRRC28-213ENST00000559399 PISDQ9UG56 409 aa14.92□□□□□ -0.02
LRRC28-213ENST00000559399 ACSL6Q9UKU0 697 aa14.92□□□□□ -0.02
LRRC28-213ENST00000559399 BPTFQ12830 3046 aa14.92□□□□□ -0.02
LRRC28-213ENST00000559399 MYLKQ15746 1914 aa14.92□□□□□ -0.02
LRRC28-213ENST00000559399 MFSD11O43934 449 aa14.91□□□□□ -0.02
LRRC28-213ENST00000559399 CTPS1P17812 591 aa14.91□□□□□ -0.02
LRRC28-213ENST00000559399 IL4RP24394 825 aa14.91□□□□□ -0.02
LRRC28-213ENST00000559399 MAZP56270 477 aaKnown RBP14.91□□□□□ -0.02
LRRC28-213ENST00000559399 UBASH3AP57075 661 aa14.91□□□□□ -0.02
LRRC28-213ENST00000559399 MMRN1Q13201 1228 aa14.91□□□□□ -0.02
LRRC28-213ENST00000559399 NFKBIBQ15653 356 aa14.91□□□□□ -0.02
LRRC28-213ENST00000559399 HADHQ16836 314 aaKnown RBP14.91□□□□□ -0.02
LRRC28-213ENST00000559399 NRROSQ86YC3 692 aa14.91□□□□□ -0.02
LRRC28-213ENST00000559399 FAM71BQ8TC56 605 aa14.91□□□□□ -0.02
LRRC28-213ENST00000559399 ZDHHC1Q8WTX9 485 aa14.91□□□□□ -0.02
LRRC28-213ENST00000559399 PIH1D2Q8WWB5 315 aa14.91□□□□□ -0.02
LRRC28-213ENST00000559399 TTC9Q92623 222 aa14.91□□□□□ -0.02
LRRC28-213ENST00000559399 CCNL2Q96S94 520 aaPredicted RBP14.91□□□□□ -0.02
LRRC28-213ENST00000559399 CMKLR1Q99788 373 aa14.91□□□□□ -0.02
LRRC28-213ENST00000559399 SPATS2LQ9NUQ6 558 aaKnown RBP14.91□□□□□ -0.02
LRRC28-213ENST00000559399 HAUS2Q9NVX0 235 aa14.91□□□□□ -0.02
LRRC28-213ENST00000559399 WDR70Q9NW82 654 aa14.91□□□□□ -0.02
LRRC28-213ENST00000559399 TAAR2Q9P1P5 351 aa14.91□□□□□ -0.02
LRRC28-213ENST00000559399 CAPN11Q9UMQ6 739 aa14.91□□□□□ -0.02
LRRC28-213ENST00000559399 SUFUQ9UMX1 484 aa14.91□□□□□ -0.02
LRRC28-213ENST00000559399 SLC17A4Q9Y2C5 497 aa14.91□□□□□ -0.02
LRRC28-213ENST00000559399 COL27A1Q8IZC6 1860 aaPredicted RBP14.91□□□□□ -0.02
LRRC28-213ENST00000559399 ASXL3Q9C0F0 2248 aa14.9□□□□□ -0.02
LRRC28-213ENST00000559399 SYCE3A1L190 88 aa14.9□□□□□ -0.02
LRRC28-213ENST00000559399 RHPN2P1A8MT19 583 aa14.9□□□□□ -0.02
LRRC28-213ENST00000559399 ZW10O43264 779 aa14.9□□□□□ -0.02
LRRC28-213ENST00000559399 FUCA1P04066 466 aa14.9□□□□□ -0.02
LRRC28-213ENST00000559399 FGF1P05230 155 aa14.9□□□□□ -0.02
LRRC28-213ENST00000559399 IVLP07476 585 aa14.9□□□□□ -0.02
LRRC28-213ENST00000559399 CD48P09326 243 aa14.9□□□□□ -0.02
LRRC28-213ENST00000559399 GJC1P36383 396 aa14.9□□□□□ -0.02
LRRC28-213ENST00000559399 GARSP41250 739 aaKnown RBP14.9□□□□□ -0.02
LRRC28-213ENST00000559399 B4GALNT1Q00973 533 aa14.9□□□□□ -0.02
LRRC28-213ENST00000559399 DPTQ07507 201 aa14.9□□□□□ -0.02
LRRC28-213ENST00000559399 ITKQ08881 620 aa14.9□□□□□ -0.02
LRRC28-213ENST00000559399 GALNT2Q10471 571 aa14.9□□□□□ -0.02
LRRC28-213ENST00000559399 BIRC2Q13490 618 aa14.9□□□□□ -0.02
LRRC28-213ENST00000559399 PEX6Q13608 980 aa14.9□□□□□ -0.02
LRRC28-213ENST00000559399 DPYSL3Q14195 570 aa14.9□□□□□ -0.02
LRRC28-213ENST00000559399 PTPRRQ15256 657 aa14.9□□□□□ -0.02
LRRC28-213ENST00000559399 CCDC122Q5T0U0 273 aa14.9□□□□□ -0.02
LRRC28-213ENST00000559399 PHF19Q5T6S3 580 aa14.9□□□□□ -0.02
LRRC28-213ENST00000559399 LRRC66Q68CR7 880 aa14.9□□□□□ -0.02
LRRC28-213ENST00000559399 NCBP2-AS2Q69YL0 99 aa14.9□□□□□ -0.02
LRRC28-213ENST00000559399 TIGD7Q6NT04 549 aaPredicted RBP14.9□□□□□ -0.02
LRRC28-213ENST00000559399 ALKBH5Q6P6C2 394 aaKnown RBP14.9□□□□□ -0.02
LRRC28-213ENST00000559399 SLC30A9Q6PML9 568 aa14.9□□□□□ -0.02
LRRC28-213ENST00000559399 ZNF438Q7Z4V0 828 aa14.9□□□□□ -0.02
LRRC28-213ENST00000559399 TECPR1Q7Z6L1 1165 aa14.9□□□□□ -0.02
LRRC28-213ENST00000559399 C17orf82Q86X59 251 aaPredicted RBP14.9□□□□□ -0.02
LRRC28-213ENST00000559399 SLITRK4Q8IW52 837 aa14.9□□□□□ -0.02
LRRC28-213ENST00000559399 ZNF564Q8TBZ8 553 aaPredicted RBP14.9□□□□□ -0.02
LRRC28-213ENST00000559399 PTCD2Q8WV60 388 aaKnown RBP14.9□□□□□ -0.02
LRRC28-213ENST00000559399 CPLX3Q8WVH0 158 aa14.9□□□□□ -0.02
LRRC28-213ENST00000559399 MAML1Q92585 1016 aa14.9□□□□□ -0.02
LRRC28-213ENST00000559399 CDH19Q9H159 772 aa14.9□□□□□ -0.02
LRRC28-213ENST00000559399 LUC7L2Q9Y383 392 aaKnown RBP14.9□□□□□ -0.02
LRRC28-213ENST00000559399 PPIL1Q9Y3C6 166 aa14.9□□□□□ -0.02
LRRC28-213ENST00000559399 KALRNO60229 2985 aa14.9□□□□□ -0.02
LRRC28-213ENST00000559399 GOLGA6L19H0YKK7 550 aa14.89□□□□□ -0.03
LRRC28-213ENST00000559399 NVLO15381 856 aaKnown RBP14.89□□□□□ -0.03
LRRC28-213ENST00000559399 FZD6O60353 706 aa14.89□□□□□ -0.03
LRRC28-213ENST00000559399 ECEL1O95672 775 aa14.89□□□□□ -0.03
LRRC28-213ENST00000559399 CPNE6O95741 557 aa14.89□□□□□ -0.03
LRRC28-213ENST00000559399 PDHA1P08559 390 aa14.89□□□□□ -0.03
LRRC28-213ENST00000559399 PLA2G2AP14555 144 aa14.89□□□□□ -0.03
LRRC28-213ENST00000559399 ITIH1P19827 911 aa14.89□□□□□ -0.03
LRRC28-213ENST00000559399 AK4P27144 223 aaPredicted RBP14.89□□□□□ -0.03
LRRC28-213ENST00000559399 GPR1P46091 355 aa14.89□□□□□ -0.03
LRRC28-213ENST00000559399 POLD2P49005 469 aa14.89□□□□□ -0.03
LRRC28-213ENST00000559399 ARSEP51690 589 aa14.89□□□□□ -0.03
LRRC28-213ENST00000559399 EPHB1P54762 984 aa14.89□□□□□ -0.03
LRRC28-213ENST00000559399 NR1D2Q14995 579 aa14.89□□□□□ -0.03
LRRC28-213ENST00000559399 PAFAH1B3Q15102 231 aaKnown RBP14.89□□□□□ -0.03
LRRC28-213ENST00000559399 CLPPQ16740 277 aaPredicted RBP14.89□□□□□ -0.03
LRRC28-213ENST00000559399 AMZ1Q400G9 498 aa14.89□□□□□ -0.03
LRRC28-213ENST00000559399 KIAA1614Q5VZ46 1190 aa14.89□□□□□ -0.03
LRRC28-213ENST00000559399 ALG1LQ6GMV1 187 aa14.89□□□□□ -0.03
LRRC28-213ENST00000559399 DOK6Q6PKX4 331 aa14.89□□□□□ -0.03
LRRC28-213ENST00000559399 ADAMTSL4Q6UY14 1074 aa14.89□□□□□ -0.03
LRRC28-213ENST00000559399 ZNF605Q86T29 641 aa14.89□□□□□ -0.03
LRRC28-213ENST00000559399 KCTD6Q8NC69 237 aa14.89□□□□□ -0.03
LRRC28-213ENST00000559399 AP2M1Q96CW1 435 aa14.89□□□□□ -0.03
LRRC28-213ENST00000559399 ZNF670Q9BS34 389 aa14.89□□□□□ -0.03
LRRC28-213ENST00000559399 RDH14Q9HBH5 336 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms