RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 TMEM139Q8IV31 216 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 HID1Q8IV36 788 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 CDKL3Q8IVW4 592 aaPredicted RBP4.37□□□□□ -1.71
SNX1-205ENST00000559339 LRRC8AQ8IWT6 810 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 NRSN1Q8IZ57 195 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 LRRC57Q8N9N7 239 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 FAM181AQ8N9Y4 354 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 ZNF548Q8NEK5 533 aaPredicted RBP4.37□□□□□ -1.71
SNX1-205ENST00000559339 OR6C4Q8NGE1 309 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 ARRDC2Q8TBH0 407 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 LRRN4Q8WUT4 740 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 PIH1D2Q8WWB5 315 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 KRT35Q92764 455 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 NAT6Q93015 286 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 AP2M1Q96CW1 435 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 DTD2Q96FN9 168 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 IMP4Q96G21 291 aaKnown RBP4.37□□□□□ -1.71
SNX1-205ENST00000559339 TEKT5Q96M29 485 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 COQ10AQ96MF6 247 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 WDR92Q96MX6 357 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 LYSMD1Q96S90 227 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 RBM15Q96T37 977 aaKnown RBP eCLIP4.37□□□□□ -1.71
SNX1-205ENST00000559339 DESI2Q9BSY9 194 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 HEMGNQ9BXL5 484 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 OSBPL8Q9BZF1 889 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 GPR63Q9BZJ6 419 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 LACRTQ9GZZ8 138 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 SLC25A51Q9H1U9 297 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 TRABDQ9H4I3 376 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 MAGEE1Q9HCI5 957 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 RAD18Q9NS91 495 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 UCKL1Q9NWZ5 548 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.37□□□□□ -1.71
SNX1-205ENST00000559339 PKD2L2Q9NZM6 624 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 FAM153AQ9UHL3 310 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 SALL4Q9UJQ4 1053 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 GUCA1BQ9UMX6 200 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 AAR2Q9Y312 384 aaKnown RBP4.37□□□□□ -1.71
SNX1-205ENST00000559339 REXO2Q9Y3B8 237 aaKnown RBP4.37□□□□□ -1.71
SNX1-205ENST00000559339 MSRB2Q9Y3D2 182 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 DGKBQ9Y6T7 804 aa4.37□□□□□ -1.71
SNX1-205ENST00000559339 PCDH15Q96QU1 1955 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 TRPM6Q9BX84 2022 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 SPEGQ15772 3267 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 PRSS38A1L453 326 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 CPED1A4D0V7 1026 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 GRID2IPA4D2P6 1211 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 FAM221BA6H8Z2 402 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 TRIM38O00635 465 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 YY2O15391 372 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 KCNN4O15554 427 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 PPFIA2O75334 1257 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 PMPCBO75439 489 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 GCATO75600 419 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 DKK1O94907 266 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 CLDN7O95471 211 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 NDST3O95803 873 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 FTCDO95954 541 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 MT-CYBP00156 380 aaPredicted RBP4.36□□□□□ -1.71
SNX1-205ENST00000559339 PRLP01236 227 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 MMP2P08253 660 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 RBP3P10745 1247 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 PYGMP11217 842 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 PECAM1P16284 738 aaPredicted RBP4.36□□□□□ -1.71
SNX1-205ENST00000559339 HLA-DPA1P20036 260 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 SPINK2P20155 84 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 MSNP26038 577 aaKnown RBP4.36□□□□□ -1.71
SNX1-205ENST00000559339 TEAD1P28347 426 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 STIP1P31948 543 aaKnown RBP4.36□□□□□ -1.71
SNX1-205ENST00000559339 ACTN2P35609 894 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 HMGCLP35914 325 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 MARCKSL1P49006 195 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 ACADVLP49748 655 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 STC1P52823 247 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 EIF3EP60228 445 aaKnown RBP4.36□□□□□ -1.71
SNX1-205ENST00000559339 PDE1BQ01064 536 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 OTUD4Q01804 1114 aaKnown RBP4.36□□□□□ -1.71
SNX1-205ENST00000559339 NIPAL4Q0D2K0 466 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 EIF2B5Q13144 721 aaKnown RBP4.36□□□□□ -1.71
SNX1-205ENST00000559339 MPP3Q13368 585 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 C1orf61Q13536 156 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 LRP8Q14114 963 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 GALNT3Q14435 633 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 NOMO1Q15155 1222 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 NR0B2Q15466 257 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 CDKN3Q16667 212 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 QPCTQ16769 361 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 ALG11Q2TAA5 492 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 DEFB133Q30KQ1 61 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 P3H1Q32P28 736 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 PROX2Q3B8N5 592 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 C6orf132Q5T0Z8 1188 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 SEL1L2Q5TEA6 688 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 DARS2Q6PI48 645 aaKnown RBP4.36□□□□□ -1.71
SNX1-205ENST00000559339 DHRS13Q6UX07 377 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 UNQ6494/PRO21346Q6UXR6 183 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 CCNI2Q6ZMN8 369 aaPredicted RBP4.36□□□□□ -1.71
SNX1-205ENST00000559339 B4GALNT4Q76KP1 1039 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 ZNF765Q7L2R6 523 aa4.36□□□□□ -1.71
SNX1-205ENST00000559339 TMPRSS7Q7RTY8 843 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms