RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 HDCP19113 662 aa11.27□□□□□ -0.61
CLPX-204ENST00000559152 INHBCP55103 352 aa11.27□□□□□ -0.61
CLPX-204ENST00000559152 SULT2A1Q06520 285 aa11.27□□□□□ -0.61
CLPX-204ENST00000559152 RAD51Q06609 339 aa11.27□□□□□ -0.61
CLPX-204ENST00000559152 TBL3Q12788 808 aaKnown RBP11.27□□□□□ -0.61
CLPX-204ENST00000559152 ZNF678Q5SXM1 525 aa11.27□□□□□ -0.61
CLPX-204ENST00000559152 NCEH1Q6PIU2 408 aa11.27□□□□□ -0.61
CLPX-204ENST00000559152 NKAPQ8N5F7 415 aaKnown RBP11.27□□□□□ -0.61
CLPX-204ENST00000559152 STAG3L4Q8TBR4 150 aa11.27□□□□□ -0.61
CLPX-204ENST00000559152 LPGAT1Q92604 370 aa11.27□□□□□ -0.61
CLPX-204ENST00000559152 PHF21BQ96EK2 531 aa11.27□□□□□ -0.61
CLPX-204ENST00000559152 MOCOSQ96EN8 888 aa11.27□□□□□ -0.61
CLPX-204ENST00000559152 EXOC2Q96KP1 924 aa11.27□□□□□ -0.61
CLPX-204ENST00000559152 FEM1AQ9BSK4 669 aa11.27□□□□□ -0.61
CLPX-204ENST00000559152 SHCBP1LQ9BZQ2 653 aa11.27□□□□□ -0.61
CLPX-204ENST00000559152 VPS28Q9UK41 221 aa11.27□□□□□ -0.61
CLPX-204ENST00000559152 TMCO1Q9UM00 188 aa11.27□□□□□ -0.61
CLPX-204ENST00000559152 SPO11Q9Y5K1 396 aa11.27□□□□□ -0.61
CLPX-204ENST00000559152 ACTL7AQ9Y615 435 aa11.27□□□□□ -0.61
CLPX-204ENST00000559152 TET1Q8NFU7 2136 aa11.27□□□□□ -0.61
CLPX-204ENST00000559152 UBA6A0AVT1 1052 aaPredicted RBP11.27□□□□□ -0.61
CLPX-204ENST00000559152 LCHNA4D1U4 455 aa11.27□□□□□ -0.61
CLPX-204ENST00000559152 GOLGA8CPA6NN73 597 aa11.27□□□□□ -0.61
CLPX-204ENST00000559152 SYCE1LA8MT33 242 aa11.27□□□□□ -0.61
CLPX-204ENST00000559152 H7C0S8 307 aa11.27□□□□□ -0.61
CLPX-204ENST00000559152 SDHDO14521 159 aa11.27□□□□□ -0.61
CLPX-204ENST00000559152 STX7O15400 261 aaKnown RBP11.27□□□□□ -0.61
CLPX-204ENST00000559152 MAP3K7O43318 606 aa11.27□□□□□ -0.61
CLPX-204ENST00000559152 ZMPSTE24O75844 475 aa11.27□□□□□ -0.61
CLPX-204ENST00000559152 SRP72O76094 671 aaKnown RBP11.27□□□□□ -0.61
CLPX-204ENST00000559152 SUPT7LO94864 414 aa11.27□□□□□ -0.61
CLPX-204ENST00000559152 CLTBP09497 229 aa11.27□□□□□ -0.61
CLPX-204ENST00000559152 ACADSP16219 412 aa11.27□□□□□ -0.61
CLPX-204ENST00000559152 ATP6V1C1P21283 382 aa11.27□□□□□ -0.61
CLPX-204ENST00000559152 CDC25CP30307 473 aa11.27□□□□□ -0.61
CLPX-204ENST00000559152 MAPK8P45983 427 aa11.27□□□□□ -0.61
CLPX-204ENST00000559152 MTTPP55157 894 aa11.27□□□□□ -0.61
CLPX-204ENST00000559152 AP1S1P61966 158 aa11.27□□□□□ -0.61
CLPX-204ENST00000559152 CDH18Q13634 790 aa11.27□□□□□ -0.61
CLPX-204ENST00000559152 SEMA3AQ14563 771 aa11.27□□□□□ -0.61
CLPX-204ENST00000559152 PTPRCAPQ14761 206 aa11.27□□□□□ -0.61
CLPX-204ENST00000559152 RETSATQ6NUM9 610 aa11.27□□□□□ -0.61
CLPX-204ENST00000559152 ADGRG6Q86SQ4 1221 aa11.27□□□□□ -0.61
CLPX-204ENST00000559152 SNX32Q86XE0 403 aa11.27□□□□□ -0.61
CLPX-204ENST00000559152 DNAJC5GQ8N7S2 189 aa11.27□□□□□ -0.61
CLPX-204ENST00000559152 DCAF4L2Q8NA75 395 aa11.27□□□□□ -0.61
CLPX-204ENST00000559152 MDGA1Q8NFP4 955 aa11.27□□□□□ -0.61
CLPX-204ENST00000559152 PPP1R36Q96LQ0 422 aa11.27□□□□□ -0.61
CLPX-204ENST00000559152 C19orf43Q9BQ61 176 aa11.27□□□□□ -0.61
CLPX-204ENST00000559152 DERL2Q9GZP9 239 aa11.27□□□□□ -0.61
CLPX-204ENST00000559152 CRISPLD2Q9H0B8 497 aa11.27□□□□□ -0.61
CLPX-204ENST00000559152 GSTO2Q9H4Y5 243 aa11.27□□□□□ -0.61
CLPX-204ENST00000559152 ACSS2Q9NR19 701 aa11.27□□□□□ -0.61
CLPX-204ENST00000559152 SMPD4Q9NXE4 827 aa11.27□□□□□ -0.61
CLPX-204ENST00000559152 TRAF6Q9Y4K3 522 aa11.27□□□□□ -0.61
CLPX-204ENST00000559152 CHD5Q8TDI0 1954 aa11.26□□□□□ -0.61
CLPX-204ENST00000559152 VPS26AO75436 327 aa11.26□□□□□ -0.61
CLPX-204ENST00000559152 GPC4O75487 556 aa11.26□□□□□ -0.61
CLPX-204ENST00000559152 HSPA1AP0DMV8 641 aaKnown RBP11.26□□□□□ -0.61
CLPX-204ENST00000559152 HSPA1BP0DMV9 641 aaKnown RBP11.26□□□□□ -0.61
CLPX-204ENST00000559152 KCNA5P22460 613 aa11.26□□□□□ -0.61
CLPX-204ENST00000559152 NUDT2P50583 147 aa11.26□□□□□ -0.61
CLPX-204ENST00000559152 CLCN4P51793 760 aa11.26□□□□□ -0.61
CLPX-204ENST00000559152 EPHB1P54762 984 aa11.26□□□□□ -0.61
CLPX-204ENST00000559152 SESN3P58005 492 aa11.26□□□□□ -0.61
CLPX-204ENST00000559152 RPL26P61254 145 aaKnown RBP11.26□□□□□ -0.61
CLPX-204ENST00000559152 RHOAP61586 193 aa11.26□□□□□ -0.61
CLPX-204ENST00000559152 IRX1P78414 480 aaPredicted RBP11.26□□□□□ -0.61
CLPX-204ENST00000559152 ART3Q13508 389 aa11.26□□□□□ -0.61
CLPX-204ENST00000559152 SQLEQ14534 574 aa11.26□□□□□ -0.61
CLPX-204ENST00000559152 CHSY3Q70JA7 882 aa11.26□□□□□ -0.61
CLPX-204ENST00000559152 PIM3Q86V86 326 aa11.26□□□□□ -0.61
CLPX-204ENST00000559152 FAM217AQ8IXS0 508 aa11.26□□□□□ -0.61
CLPX-204ENST00000559152 CLYBLQ8N0X4 340 aa11.26□□□□□ -0.61
CLPX-204ENST00000559152 STK40Q8N2I9 435 aa11.26□□□□□ -0.61
CLPX-204ENST00000559152 MAB21L3Q8N8X9 362 aa11.26□□□□□ -0.61
CLPX-204ENST00000559152 DTX3LQ8TDB6 740 aa11.26□□□□□ -0.61
CLPX-204ENST00000559152 KIAA1191Q96A73 305 aa11.26□□□□□ -0.61
CLPX-204ENST00000559152 ZFRQ96KR1 1074 aaKnown RBP11.26□□□□□ -0.61
CLPX-204ENST00000559152 ZNF570Q96NI8 536 aa11.26□□□□□ -0.61
CLPX-204ENST00000559152 CATSPER2Q96P56 530 aa11.26□□□□□ -0.61
CLPX-204ENST00000559152 C2orf49Q9BVC5 232 aaPredicted RBP11.26□□□□□ -0.61
CLPX-204ENST00000559152 OSBPL1AQ9BXW6 950 aa11.26□□□□□ -0.61
CLPX-204ENST00000559152 RC3H2Q9HBD1 1191 aaKnown RBP11.26□□□□□ -0.61
CLPX-204ENST00000559152 MRPL40Q9NQ50 206 aaKnown RBP11.26□□□□□ -0.61
CLPX-204ENST00000559152 ATP11BQ9Y2G3 1177 aa11.26□□□□□ -0.61
CLPX-204ENST00000559152 PKP3Q9Y446 797 aa11.26□□□□□ -0.61
CLPX-204ENST00000559152 PCDHGC4Q9Y5F7 938 aa11.26□□□□□ -0.61
CLPX-204ENST00000559152 MICAL3Q7RTP6 2002 aa11.26□□□□□ -0.61
CLPX-204ENST00000559152 AIM2O14862 343 aa11.25□□□□□ -0.61
CLPX-204ENST00000559152 KERAO60938 352 aa11.25□□□□□ -0.61
CLPX-204ENST00000559152 FGF4P08620 206 aa11.25□□□□□ -0.61
CLPX-204ENST00000559152 ANPEPP15144 967 aa11.25□□□□□ -0.61
CLPX-204ENST00000559152 PFKLP17858 780 aa11.25□□□□□ -0.61
CLPX-204ENST00000559152 PLK1P53350 603 aa11.25□□□□□ -0.61
CLPX-204ENST00000559152 ADARP55265 1226 aaKnown RBP11.25□□□□□ -0.61
CLPX-204ENST00000559152 STX5Q13190 355 aa11.25□□□□□ -0.61
CLPX-204ENST00000559152 MPP7Q5T2T1 576 aa11.25□□□□□ -0.61
CLPX-204ENST00000559152 UGT3A1Q6NUS8 523 aa11.25□□□□□ -0.61
CLPX-204ENST00000559152 Q6ZNB5 142 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms