RNA–Protein interactions for RNA: ENST00000558602.5

IDH3A-208, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, human

TSL 2

Gene IDH3A, Length 2,217 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IDH3A-208	ENST00000558602	UBOX5	O94941	541 aa		4.9	□□□□□ -1.63
IDH3A-208	ENST00000558602	PIGN	O95427	931 aa		4.9	□□□□□ -1.63
IDH3A-208	ENST00000558602	SLC4A1	P02730	911 aa		4.9	□□□□□ -1.63
IDH3A-208	ENST00000558602	MPO	P05164	745 aa		4.9	□□□□□ -1.63
IDH3A-208	ENST00000558602	RB1	P06400	928 aa		4.9	□□□□□ -1.63
IDH3A-208	ENST00000558602	DLD	P09622	509 aa	Known RBP	4.9	□□□□□ -1.63
IDH3A-208	ENST00000558602	ALPI	P09923	528 aa		4.9	□□□□□ -1.63
IDH3A-208	ENST00000558602	NEFH	P12036	1026 aa		4.9	□□□□□ -1.63
IDH3A-208	ENST00000558602	CTPS1	P17812	591 aa		4.9	□□□□□ -1.63
IDH3A-208	ENST00000558602	PAM	P19021	973 aa		4.9	□□□□□ -1.63
IDH3A-208	ENST00000558602	CA5A	P35218	305 aa		4.9	□□□□□ -1.63
IDH3A-208	ENST00000558602	MAGEA10	P43363	369 aa	Predicted RBP	4.9	□□□□□ -1.63
IDH3A-208	ENST00000558602	GLRB	P48167	497 aa		4.9	□□□□□ -1.63
IDH3A-208	ENST00000558602	ZNF140	P52738	457 aa	Predicted RBP	4.9	□□□□□ -1.63
IDH3A-208	ENST00000558602	CDKN2D	P55273	166 aa		4.9	□□□□□ -1.63
IDH3A-208	ENST00000558602	ERVK-21	P61565	698 aa		4.9	□□□□□ -1.63
IDH3A-208	ENST00000558602	RHOA	P61586	193 aa		4.9	□□□□□ -1.63
IDH3A-208	ENST00000558602	PRAME	P78395	509 aa		4.9	□□□□□ -1.63
IDH3A-208	ENST00000558602	NSUN2	Q08J23	767 aa	Known RBP eCLIP	4.9	□□□□□ -1.63
IDH3A-208	ENST00000558602	MESP2	Q0VG99	397 aa		4.9	□□□□□ -1.63
IDH3A-208	ENST00000558602	GPM6B	Q13491	265 aa		4.9	□□□□□ -1.63
IDH3A-208	ENST00000558602	ZNF77	Q15935	545 aa		4.9	□□□□□ -1.63
IDH3A-208	ENST00000558602	INSC	Q1MX18	579 aa		4.9	□□□□□ -1.63
IDH3A-208	ENST00000558602	CTC1	Q2NKJ3	1217 aa		4.9	□□□□□ -1.63
IDH3A-208	ENST00000558602	LRIT3	Q3SXY7	679 aa		4.9	□□□□□ -1.63
IDH3A-208	ENST00000558602	FUT11	Q495W5	492 aa		4.9	□□□□□ -1.63
IDH3A-208	ENST00000558602	C6orf132	Q5T0Z8	1188 aa		4.9	□□□□□ -1.63
IDH3A-208	ENST00000558602	TMEM215	Q68D42	235 aa		4.9	□□□□□ -1.63
IDH3A-208	ENST00000558602	NAIF1	Q69YI7	327 aa	Predicted RBP	4.9	□□□□□ -1.63
IDH3A-208	ENST00000558602	ZNF549	Q6P9A3	640 aa		4.9	□□□□□ -1.63
IDH3A-208	ENST00000558602	TMEM207	Q6UWW9	146 aa		4.9	□□□□□ -1.63
IDH3A-208	ENST00000558602	NAPRT	Q6XQN6	538 aa		4.9	□□□□□ -1.63
IDH3A-208	ENST00000558602	YTHDF3	Q7Z739	585 aa	Known RBP	4.9	□□□□□ -1.63
IDH3A-208	ENST00000558602	ZSWIM9	Q86XI8	627 aa		4.9	□□□□□ -1.63
IDH3A-208	ENST00000558602	ARID3B	Q8IVW6	561 aa	Predicted RBP	4.9	□□□□□ -1.63
IDH3A-208	ENST00000558602	ADGRG2	Q8IZP9	1017 aa		4.9	□□□□□ -1.63
IDH3A-208	ENST00000558602	MICALL1	Q8N3F8	863 aa		4.9	□□□□□ -1.63
IDH3A-208	ENST00000558602	OTUD6B	Q8N6M0	293 aa		4.9	□□□□□ -1.63
IDH3A-208	ENST00000558602	ANKS4B	Q8N8V4	417 aa		4.9	□□□□□ -1.63
IDH3A-208	ENST00000558602	OR4K2	Q8NGD2	314 aa		4.9	□□□□□ -1.63
IDH3A-208	ENST00000558602	OR6Y1	Q8NGX8	325 aa		4.9	□□□□□ -1.63
IDH3A-208	ENST00000558602	ANKRD49	Q8WVL7	239 aa		4.9	□□□□□ -1.63
IDH3A-208	ENST00000558602	PIH1D2	Q8WWB5	315 aa		4.9	□□□□□ -1.63
IDH3A-208	ENST00000558602	MIEF2	Q96C03	454 aa		4.9	□□□□□ -1.63
IDH3A-208	ENST00000558602	NXNL1	Q96CM4	212 aa		4.9	□□□□□ -1.63
IDH3A-208	ENST00000558602	GRAMD1A	Q96CP6	724 aa		4.9	□□□□□ -1.63
IDH3A-208	ENST00000558602	PRR11	Q96HE9	360 aa	Predicted RBP	4.9	□□□□□ -1.63
IDH3A-208	ENST00000558602	GCNA	Q96QF7	691 aa		4.9	□□□□□ -1.63
IDH3A-208	ENST00000558602	TACO1	Q9BSH4	297 aa	Known RBP	4.9	□□□□□ -1.63
IDH3A-208	ENST00000558602	MTIF3	Q9H2K0	278 aa	Known RBP	4.9	□□□□□ -1.63
IDH3A-208	ENST00000558602	BPIFA1	Q9NP55	256 aa		4.9	□□□□□ -1.63
IDH3A-208	ENST00000558602	KLHL14	Q9P2G3	628 aa		4.9	□□□□□ -1.63
IDH3A-208	ENST00000558602	CPSF2	Q9P2I0	782 aa	Known RBP	4.9	□□□□□ -1.63
IDH3A-208	ENST00000558602	RUVBL2	Q9Y230	463 aa	Known RBP	4.9	□□□□□ -1.63
IDH3A-208	ENST00000558602	CRYL1	Q9Y2S2	319 aa		4.9	□□□□□ -1.63
IDH3A-208	ENST00000558602	PCDHB9	Q9Y5E1	797 aa		4.9	□□□□□ -1.63
IDH3A-208	ENST00000558602	PCDHGB7	Q9Y5F8	929 aa		4.9	□□□□□ -1.63
IDH3A-208	ENST00000558602	WNT6	Q9Y6F9	365 aa		4.9	□□□□□ -1.63
IDH3A-208	ENST00000558602	DOCK8	Q8NF50	2099 aa		4.89	□□□□□ -1.63
IDH3A-208	ENST00000558602	NUP210	Q8TEM1	1887 aa	Predicted RBP	4.89	□□□□□ -1.63
IDH3A-208	ENST00000558602	NEDD8-MDP1	E9PL57	170 aa		4.89	□□□□□ -1.63
IDH3A-208	ENST00000558602	RFXAP	O00287	272 aa		4.89	□□□□□ -1.63
IDH3A-208	ENST00000558602	TRAFD1	O14545	582 aa	Predicted RBP	4.89	□□□□□ -1.63
IDH3A-208	ENST00000558602	CD3EAP	O15446	510 aa	Known RBP	4.89	□□□□□ -1.63
IDH3A-208	ENST00000558602	RPP40	O75818	363 aa	Known RBP	4.89	□□□□□ -1.63
IDH3A-208	ENST00000558602	PENK	P01210	267 aa	Predicted RBP	4.89	□□□□□ -1.63
IDH3A-208	ENST00000558602	IL1B	P01584	269 aa		4.89	□□□□□ -1.63
IDH3A-208	ENST00000558602	HNRNPA1	P09651	372 aa	Known RBP eCLIP	4.89	□□□□□ -1.63
IDH3A-208	ENST00000558602	SRC	P12931	536 aa		4.89	□□□□□ -1.63
IDH3A-208	ENST00000558602	CPA3	P15088	417 aa		4.89	□□□□□ -1.63
IDH3A-208	ENST00000558602	PFKL	P17858	780 aa		4.89	□□□□□ -1.63
IDH3A-208	ENST00000558602	PSMA3	P25788	255 aa		4.89	□□□□□ -1.63
IDH3A-208	ENST00000558602	HOXA9	P31269	272 aa		4.89	□□□□□ -1.63
IDH3A-208	ENST00000558602	BMP8B	P34820	402 aa		4.89	□□□□□ -1.63
IDH3A-208	ENST00000558602	CCR10	P46092	362 aa		4.89	□□□□□ -1.63
IDH3A-208	ENST00000558602	CD151	P48509	253 aa		4.89	□□□□□ -1.63
IDH3A-208	ENST00000558602	LIG3	P49916	1009 aa		4.89	□□□□□ -1.63
IDH3A-208	ENST00000558602	PLK1	P53350	603 aa		4.89	□□□□□ -1.63
IDH3A-208	ENST00000558602	RAB10	P61026	200 aa		4.89	□□□□□ -1.63
IDH3A-208	ENST00000558602	SEMG2	Q02383	582 aa		4.89	□□□□□ -1.63
IDH3A-208	ENST00000558602	STX3	Q13277	289 aa		4.89	□□□□□ -1.63
IDH3A-208	ENST00000558602	ITGA9	Q13797	1035 aa		4.89	□□□□□ -1.63
IDH3A-208	ENST00000558602	KCNC3	Q14003	757 aa		4.89	□□□□□ -1.63
IDH3A-208	ENST00000558602	TAF1A	Q15573	450 aa	Predicted RBP	4.89	□□□□□ -1.63
IDH3A-208	ENST00000558602	SLC14A2	Q15849	920 aa		4.89	□□□□□ -1.63
IDH3A-208	ENST00000558602	GALNTL6	Q49A17	601 aa		4.89	□□□□□ -1.63
IDH3A-208	ENST00000558602	SETMAR	Q53H47	684 aa	Predicted RBP	4.89	□□□□□ -1.63
IDH3A-208	ENST00000558602	LACTB2	Q53H82	288 aa	Predicted RBP	4.89	□□□□□ -1.63
IDH3A-208	ENST00000558602	PITRM1	Q5JRX3	1037 aa		4.89	□□□□□ -1.63
IDH3A-208	ENST00000558602	LY6G5C	Q5SRR4	150 aa		4.89	□□□□□ -1.63
IDH3A-208	ENST00000558602	PSAPL1	Q6NUJ1	521 aa		4.89	□□□□□ -1.63
IDH3A-208	ENST00000558602	TMC5	Q6UXY8	1006 aa		4.89	□□□□□ -1.63
IDH3A-208	ENST00000558602	CCDC121	Q6ZUS5	278 aa		4.89	□□□□□ -1.63
IDH3A-208	ENST00000558602	RAPH1	Q70E73	1250 aa		4.89	□□□□□ -1.63
IDH3A-208	ENST00000558602	PIM3	Q86V86	326 aa		4.89	□□□□□ -1.63
IDH3A-208	ENST00000558602	PIANP	Q8IYJ0	282 aa		4.89	□□□□□ -1.63
IDH3A-208	ENST00000558602	FSTL5	Q8N475	847 aa	Predicted RBP	4.89	□□□□□ -1.63
IDH3A-208	ENST00000558602	TTC30B	Q8N4P2	665 aa		4.89	□□□□□ -1.63
IDH3A-208	ENST00000558602	EFHB	Q8N7U6	833 aa		4.89	□□□□□ -1.63
IDH3A-208	ENST00000558602	NAT16	Q8N8M0	369 aa		4.89	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms