RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 ITPKAP23677 461 aa13.96□□□□□ -0.17
SPG11-210ENST00000558319 NRLP54845 237 aa13.96□□□□□ -0.17
SPG11-210ENST00000558319 RAB2AP61019 212 aa13.96□□□□□ -0.17
SPG11-210ENST00000558319 CIR1Q86X95 450 aaPredicted RBP13.96□□□□□ -0.17
SPG11-210ENST00000558319 ADGRG2Q8IZP9 1017 aa13.96□□□□□ -0.17
SPG11-210ENST00000558319 POPDC2Q9HBU9 364 aa13.96□□□□□ -0.17
SPG11-210ENST00000558319 GPN1Q9HCN4 374 aaPredicted RBP13.96□□□□□ -0.17
SPG11-210ENST00000558319 GOT1P17174 413 aa13.96□□□□□ -0.17
SPG11-210ENST00000558319 EFNA1P20827 205 aaPredicted RBP13.96□□□□□ -0.17
SPG11-210ENST00000558319 MAT2AP31153 395 aaKnown RBP13.96□□□□□ -0.17
SPG11-210ENST00000558319 IST1P53990 364 aa13.96□□□□□ -0.17
SPG11-210ENST00000558319 MC1RQ01726 317 aa13.96□□□□□ -0.17
SPG11-210ENST00000558319 LINGO4Q6UY18 593 aa13.96□□□□□ -0.17
SPG11-210ENST00000558319 RALGPS2Q86X27 583 aaPredicted RBP13.96□□□□□ -0.17
SPG11-210ENST00000558319 CD302Q8IX05 232 aa13.96□□□□□ -0.17
SPG11-210ENST00000558319 SLC9A6Q92581 669 aa13.96□□□□□ -0.17
SPG11-210ENST00000558319 ASB2Q96Q27 587 aa13.96□□□□□ -0.17
SPG11-210ENST00000558319 WRAP53Q9BUR4 548 aaKnown RBP13.96□□□□□ -0.17
SPG11-210ENST00000558319 PLCL2Q9UPR0 1127 aa13.96□□□□□ -0.17
SPG11-210ENST00000558319 BCORL1Q5H9F3 1711 aa13.96□□□□□ -0.17
SPG11-210ENST00000558319 FOXO6A8MYZ6 492 aa13.96□□□□□ -0.17
SPG11-210ENST00000558319 SEPT4O43236 478 aa13.96□□□□□ -0.17
SPG11-210ENST00000558319 TFPIP10646 304 aa13.96□□□□□ -0.17
SPG11-210ENST00000558319 SERPINA4P29622 427 aa13.96□□□□□ -0.17
SPG11-210ENST00000558319 RAB25P57735 213 aa13.96□□□□□ -0.17
SPG11-210ENST00000558319 INTS11Q5TA45 600 aaKnown RBP13.96□□□□□ -0.17
SPG11-210ENST00000558319 OTOP1Q7RTM1 612 aa13.96□□□□□ -0.17
SPG11-210ENST00000558319 C4orf19Q8IY42 314 aa13.96□□□□□ -0.17
SPG11-210ENST00000558319 GPR65Q8IYL9 337 aa13.96□□□□□ -0.17
SPG11-210ENST00000558319 FAM98AQ8NCA5 519 aaKnown RBP13.96□□□□□ -0.17
SPG11-210ENST00000558319 DAGLBQ8NCG7 672 aa13.96□□□□□ -0.17
SPG11-210ENST00000558319 OR4A15Q8NGL6 344 aa13.96□□□□□ -0.17
SPG11-210ENST00000558319 C18orf25Q96B23 403 aaPredicted RBP13.96□□□□□ -0.17
SPG11-210ENST00000558319 TBCBQ99426 244 aa13.96□□□□□ -0.17
SPG11-210ENST00000558319 PTPN18Q99952 460 aa13.96□□□□□ -0.17
SPG11-210ENST00000558319 ASAH2Q9NR71 780 aa13.96□□□□□ -0.17
SPG11-210ENST00000558319 MALT1Q9UDY8 824 aa13.96□□□□□ -0.17
SPG11-210ENST00000558319 TBC1D30Q9Y2I9 924 aa13.96□□□□□ -0.17
SPG11-210ENST00000558319 FADS3Q9Y5Q0 445 aa13.96□□□□□ -0.17
SPG11-210ENST00000558319 THRBP10828 461 aa13.96□□□□□ -0.18
SPG11-210ENST00000558319 PSMD8P48556 350 aa13.96□□□□□ -0.18
SPG11-210ENST00000558319 TPTEP56180 551 aa13.96□□□□□ -0.18
SPG11-210ENST00000558319 SLC20A2Q08357 652 aa13.96□□□□□ -0.18
SPG11-210ENST00000558319 SIM2Q14190 667 aaPredicted RBP13.96□□□□□ -0.18
SPG11-210ENST00000558319 NFE2Q16621 373 aaPredicted RBP13.96□□□□□ -0.18
SPG11-210ENST00000558319 CPSF6Q16630 551 aaKnown RBP eCLIP13.96□□□□□ -0.18
SPG11-210ENST00000558319 CYP2A13Q16696 494 aa13.96□□□□□ -0.18
SPG11-210ENST00000558319 DCBLD1Q8N8Z6 715 aa13.96□□□□□ -0.18
SPG11-210ENST00000558319 GIT1Q9Y2X7 761 aa13.96□□□□□ -0.18
SPG11-210ENST00000558319 UMODL1Q5DID0 1318 aa13.96□□□□□ -0.18
SPG11-210ENST00000558319 CCNDBP1O95273 360 aa13.95□□□□□ -0.18
SPG11-210ENST00000558319 CCNYL3P0C7X3 344 aa13.95□□□□□ -0.18
SPG11-210ENST00000558319 KDELR1P24390 212 aa13.95□□□□□ -0.18
SPG11-210ENST00000558319 IRF8Q02556 426 aa13.95□□□□□ -0.18
SPG11-210ENST00000558319 DEFB119Q8N690 84 aa13.95□□□□□ -0.18
SPG11-210ENST00000558319 NXNL1Q96CM4 212 aa13.95□□□□□ -0.18
SPG11-210ENST00000558319 FKBP14Q9NWM8 211 aa13.95□□□□□ -0.18
SPG11-210ENST00000558319 PSMD13Q9UNM6 376 aa13.95□□□□□ -0.18
SPG11-210ENST00000558319 NFASCO94856 1347 aa13.95□□□□□ -0.18
SPG11-210ENST00000558319 MED14O60244 1454 aa13.95□□□□□ -0.18
SPG11-210ENST00000558319 MCIDASD6RGH6 385 aa13.95□□□□□ -0.18
SPG11-210ENST00000558319 MID1O15344 667 aa13.95□□□□□ -0.18
SPG11-210ENST00000558319 TFEBP19484 476 aa13.95□□□□□ -0.18
SPG11-210ENST00000558319 CASP9P55211 416 aa13.95□□□□□ -0.18
SPG11-210ENST00000558319 GFOD2Q3B7J2 385 aa13.95□□□□□ -0.18
SPG11-210ENST00000558319 LDB1Q86U70 411 aaPredicted RBP13.95□□□□□ -0.18
SPG11-210ENST00000558319 GMCL1P1Q8NEA9 526 aa13.95□□□□□ -0.18
SPG11-210ENST00000558319 POLR1EQ9GZS1 481 aaKnown RBP13.95□□□□□ -0.18
SPG11-210ENST00000558319 SIRPGQ9P1W8 387 aa13.95□□□□□ -0.18
SPG11-210ENST00000558319 FAM149AA5PLN7 773 aa13.95□□□□□ -0.18
SPG11-210ENST00000558319 CCRL2O00421 344 aa13.95□□□□□ -0.18
SPG11-210ENST00000558319 IRF6O14896 467 aa13.95□□□□□ -0.18
SPG11-210ENST00000558319 GSC2O15499 205 aa13.95□□□□□ -0.18
SPG11-210ENST00000558319 INMTO95050 263 aa13.95□□□□□ -0.18
SPG11-210ENST00000558319 RASGRP1O95267 797 aa13.95□□□□□ -0.18
SPG11-210ENST00000558319 WDR59Q6PJI9 974 aa13.95□□□□□ -0.18
SPG11-210ENST00000558319 MCMBPQ9BTE3 642 aa13.95□□□□□ -0.18
SPG11-210ENST00000558319 PRKD2Q9BZL6 878 aa13.95□□□□□ -0.18
SPG11-210ENST00000558319 BRD9Q9H8M2 597 aa13.95□□□□□ -0.18
SPG11-210ENST00000558319 EIF3KQ9UBQ5 218 aaKnown RBP13.95□□□□□ -0.18
SPG11-210ENST00000558319 POLR3HQ9Y535 204 aaPredicted RBP13.95□□□□□ -0.18
SPG11-210ENST00000558319 SERPINA3P01011 423 aa13.95□□□□□ -0.18
SPG11-210ENST00000558319 BMP7P18075 431 aa13.95□□□□□ -0.18
SPG11-210ENST00000558319 SETD6Q8TBK2 473 aa13.95□□□□□ -0.18
SPG11-210ENST00000558319 DUSP9Q99956 384 aaKnown RBP13.95□□□□□ -0.18
SPG11-210ENST00000558319 MTFR1LQ9H019 292 aa13.95□□□□□ -0.18
SPG11-210ENST00000558319 DNMT3LQ9UJW3 386 aa13.95□□□□□ -0.18
SPG11-210ENST00000558319 GRIP1Q9Y3R0 1128 aa13.95□□□□□ -0.18
SPG11-210ENST00000558319 MBD5Q9P267 1494 aa13.95□□□□□ -0.18
SPG11-210ENST00000558319 NPEPPSL1A6NEC2 478 aa13.95□□□□□ -0.18
SPG11-210ENST00000558319 WWP2O00308 870 aa13.95□□□□□ -0.18
SPG11-210ENST00000558319 TUFMP49411 452 aaKnown RBP13.95□□□□□ -0.18
SPG11-210ENST00000558319 FAM13CQ8NE31 585 aa13.95□□□□□ -0.18
SPG11-210ENST00000558319 ZNF563Q8TA94 476 aa13.95□□□□□ -0.18
SPG11-210ENST00000558319 PANX1Q96RD7 426 aa13.95□□□□□ -0.18
SPG11-210ENST00000558319 CYP2S1Q96SQ9 504 aa13.95□□□□□ -0.18
SPG11-210ENST00000558319 VPS4AQ9UN37 437 aa13.95□□□□□ -0.18
SPG11-210ENST00000558319 CTSKP43235 329 aa13.94□□□□□ -0.18
SPG11-210ENST00000558319 GAL3ST3Q96A11 431 aa13.94□□□□□ -0.18
SPG11-210ENST00000558319 TAMM41Q96BW9 452 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms