RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 LRRC74BQ6ZQY2 392 aa10.55□□□□□ -0.72
TPM1-210ENST00000558264 OTOP2Q7RTS6 562 aa10.55□□□□□ -0.72
TPM1-210ENST00000558264 NET1Q7Z628 596 aaPredicted RBP10.55□□□□□ -0.72
TPM1-210ENST00000558264 LCA5Q86VQ0 697 aa10.55□□□□□ -0.72
TPM1-210ENST00000558264 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.55□□□□□ -0.72
TPM1-210ENST00000558264 HS6ST3Q8IZP7 471 aa10.55□□□□□ -0.72
TPM1-210ENST00000558264 APCDD1Q8J025 514 aa10.55□□□□□ -0.72
TPM1-210ENST00000558264 PAF1Q8N7H5 531 aa10.55□□□□□ -0.72
TPM1-210ENST00000558264 MAB21L3Q8N8X9 362 aa10.55□□□□□ -0.72
TPM1-210ENST00000558264 ADAMTS19Q8TE59 1207 aa10.55□□□□□ -0.72
TPM1-210ENST00000558264 TOP1MTQ969P6 601 aa10.55□□□□□ -0.72
TPM1-210ENST00000558264 C1orf21Q9H246 121 aa10.55□□□□□ -0.72
TPM1-210ENST00000558264 SARS2Q9NP81 518 aaKnown RBP10.55□□□□□ -0.72
TPM1-210ENST00000558264 CLEC4EQ9ULY5 219 aa10.55□□□□□ -0.72
TPM1-210ENST00000558264 RPL26L1Q9UNX3 145 aaKnown RBP10.55□□□□□ -0.72
TPM1-210ENST00000558264 PCDHB9Q9Y5E1 797 aa10.55□□□□□ -0.72
TPM1-210ENST00000558264 COPG1Q9Y678 874 aaKnown RBP10.55□□□□□ -0.72
TPM1-210ENST00000558264 IQCF5A8MTL0 148 aa10.55□□□□□ -0.72
TPM1-210ENST00000558264 BNIP3LO60238 219 aa10.55□□□□□ -0.72
TPM1-210ENST00000558264 NPHS1O60500 1241 aa10.55□□□□□ -0.72
TPM1-210ENST00000558264 SRP72O76094 671 aaKnown RBP10.55□□□□□ -0.72
TPM1-210ENST00000558264 CRTAMO95727 393 aa10.55□□□□□ -0.72
TPM1-210ENST00000558264 LMNAP02545 664 aaKnown RBP10.55□□□□□ -0.72
TPM1-210ENST00000558264 RBP1P09455 135 aa10.55□□□□□ -0.72
TPM1-210ENST00000558264 ENO3P13929 434 aaPredicted RBP10.55□□□□□ -0.72
TPM1-210ENST00000558264 CD1DP15813 335 aa10.55□□□□□ -0.72
TPM1-210ENST00000558264 ZNF37AP17032 561 aaPredicted RBP10.55□□□□□ -0.72
TPM1-210ENST00000558264 PPARGP37231 505 aaPredicted RBP10.55□□□□□ -0.72
TPM1-210ENST00000558264 CLNS1AP54105 237 aaKnown RBP10.55□□□□□ -0.72
TPM1-210ENST00000558264 PKNOX1P55347 436 aa10.55□□□□□ -0.72
TPM1-210ENST00000558264 RHOAP61586 193 aa10.55□□□□□ -0.72
TPM1-210ENST00000558264 SLC34A1Q06495 639 aa10.55□□□□□ -0.72
TPM1-210ENST00000558264 CDH18Q13634 790 aa10.55□□□□□ -0.72
TPM1-210ENST00000558264 TRMT5Q32P41 509 aaKnown RBP10.55□□□□□ -0.72
TPM1-210ENST00000558264 ZRANB3Q5FWF4 1079 aa10.55□□□□□ -0.72
TPM1-210ENST00000558264 ALG1LQ6GMV1 187 aa10.55□□□□□ -0.72
TPM1-210ENST00000558264 GK5Q6ZS86 529 aa10.55□□□□□ -0.72
TPM1-210ENST00000558264 SDCCAG8Q86SQ7 713 aaPredicted RBP10.55□□□□□ -0.72
TPM1-210ENST00000558264 PTGR2Q8N8N7 351 aaPredicted RBP10.55□□□□□ -0.72
TPM1-210ENST00000558264 SLC26A7Q8TE54 656 aa10.55□□□□□ -0.72
TPM1-210ENST00000558264 MYRFLQ96LU7 910 aa10.55□□□□□ -0.72
TPM1-210ENST00000558264 NPAS2Q99743 824 aa10.55□□□□□ -0.72
TPM1-210ENST00000558264 GSTO2Q9H4Y5 243 aa10.55□□□□□ -0.72
TPM1-210ENST00000558264 FBRSL1Q9HCM7 1045 aaKnown RBP10.55□□□□□ -0.72
TPM1-210ENST00000558264 TLR9Q9NR96 1032 aa10.55□□□□□ -0.72
TPM1-210ENST00000558264 STOML1Q9UBI4 398 aa10.55□□□□□ -0.72
TPM1-210ENST00000558264 TBX21Q9UL17 535 aa10.55□□□□□ -0.72
TPM1-210ENST00000558264 ARHGAP26Q9UNA1 814 aa10.55□□□□□ -0.72
TPM1-210ENST00000558264 NVLO15381 856 aaKnown RBP10.54□□□□□ -0.72
TPM1-210ENST00000558264 SMAD6O43541 496 aaKnown RBP10.54□□□□□ -0.72
TPM1-210ENST00000558264 NIPSNAP2O75323 286 aa10.54□□□□□ -0.72
TPM1-210ENST00000558264 NDUFS3O75489 264 aa10.54□□□□□ -0.72
TPM1-210ENST00000558264 WISP3O95389 354 aaPredicted RBP10.54□□□□□ -0.72
TPM1-210ENST00000558264 EPOP01588 193 aa10.54□□□□□ -0.72
TPM1-210ENST00000558264 F11P03951 625 aa10.54□□□□□ -0.72
TPM1-210ENST00000558264 CKMP06732 381 aa10.54□□□□□ -0.72
TPM1-210ENST00000558264 GABRR2P28476 465 aa10.54□□□□□ -0.72
TPM1-210ENST00000558264 MC4RP32245 332 aa10.54□□□□□ -0.72
TPM1-210ENST00000558264 PRMT2P55345 433 aa10.54□□□□□ -0.72
TPM1-210ENST00000558264 NME5P56597 212 aa10.54□□□□□ -0.72
TPM1-210ENST00000558264 PTPRNQ16849 979 aa10.54□□□□□ -0.72
TPM1-210ENST00000558264 GEN1Q17RS7 908 aa10.54□□□□□ -0.72
TPM1-210ENST00000558264 KLHDC10Q6PID8 442 aa10.54□□□□□ -0.72
TPM1-210ENST00000558264 CAMK1DQ8IU85 385 aa10.54□□□□□ -0.72
TPM1-210ENST00000558264 KBTBD2Q8IY47 623 aa10.54□□□□□ -0.72
TPM1-210ENST00000558264 ESAMQ96AP7 390 aa10.54□□□□□ -0.72
TPM1-210ENST00000558264 TMA16Q96EY4 203 aaKnown RBP10.54□□□□□ -0.72
TPM1-210ENST00000558264 NAF1Q96HR8 494 aaKnown RBP10.54□□□□□ -0.72
TPM1-210ENST00000558264 SLC45A3Q96JT2 553 aa10.54□□□□□ -0.72
TPM1-210ENST00000558264 KCNA7Q96RP8 456 aa10.54□□□□□ -0.72
TPM1-210ENST00000558264 GPR21Q99679 349 aa10.54□□□□□ -0.72
TPM1-210ENST00000558264 AARSD1Q9BTE6 412 aaKnown RBP10.54□□□□□ -0.72
TPM1-210ENST00000558264 NLE1Q9NVX2 485 aaPredicted RBP10.54□□□□□ -0.72
TPM1-210ENST00000558264 VPS51Q9UID3 782 aa10.54□□□□□ -0.72
TPM1-210ENST00000558264 TBC1D30Q9Y2I9 924 aa10.54□□□□□ -0.72
TPM1-210ENST00000558264 MED16Q9Y2X0 877 aa10.54□□□□□ -0.72
TPM1-210ENST00000558264 A0A1B0GTL3 188 aa10.54□□□□□ -0.72
TPM1-210ENST00000558264 CDC7O00311 574 aa10.54□□□□□ -0.72
TPM1-210ENST00000558264 ANPEPP15144 967 aa10.54□□□□□ -0.72
TPM1-210ENST00000558264 TCN1P20061 433 aaPredicted RBP10.54□□□□□ -0.72
TPM1-210ENST00000558264 EPHB3P54753 998 aa10.54□□□□□ -0.72
TPM1-210ENST00000558264 DNAJB13P59910 316 aa10.54□□□□□ -0.72
TPM1-210ENST00000558264 CYLC2Q14093 348 aaPredicted RBP10.54□□□□□ -0.72
TPM1-210ENST00000558264 SLC14A2Q15849 920 aa10.54□□□□□ -0.72
TPM1-210ENST00000558264 SETD3Q86TU7 594 aaPredicted RBP10.54□□□□□ -0.72
TPM1-210ENST00000558264 SIDT2Q8NBJ9 832 aaKnown RBP10.54□□□□□ -0.72
TPM1-210ENST00000558264 DDI1Q8WTU0 396 aa10.54□□□□□ -0.72
TPM1-210ENST00000558264 OVCA2Q8WZ82 227 aa10.54□□□□□ -0.72
TPM1-210ENST00000558264 CNDP1Q96KN2 507 aa10.54□□□□□ -0.72
TPM1-210ENST00000558264 YME1L1Q96TA2 773 aa10.54□□□□□ -0.72
TPM1-210ENST00000558264 FEM1AQ9BSK4 669 aa10.54□□□□□ -0.72
TPM1-210ENST00000558264 TNKS2Q9H2K2 1166 aa10.54□□□□□ -0.72
TPM1-210ENST00000558264 STX18Q9P2W9 335 aaKnown RBP10.54□□□□□ -0.72
TPM1-210ENST00000558264 LHX3Q9UBR4 397 aa10.54□□□□□ -0.72
TPM1-210ENST00000558264 PRRC2BQ5JSZ5 2229 aaKnown RBP10.54□□□□□ -0.72
TPM1-210ENST00000558264 CHD5Q8TDI0 1954 aa10.54□□□□□ -0.72
TPM1-210ENST00000558264 NPEPPSL1A6NEC2 478 aa10.53□□□□□ -0.72
TPM1-210ENST00000558264 C2orf81A6NN90 581 aa10.53□□□□□ -0.72
TPM1-210ENST00000558264 SUPT3HB4E1H0 165 aa10.53□□□□□ -0.72
TPM1-210ENST00000558264 ANKRD66B4E2M5 251 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms