RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 DPYSL2Q16555 572 aa15.93■□□□□ 0.14
SCFD1-224ENST00000557713 AMZ1Q400G9 498 aa15.93■□□□□ 0.14
SCFD1-224ENST00000557713 MAP9Q49MG5 647 aa15.93■□□□□ 0.14
SCFD1-224ENST00000557713 DENND2CQ68D51 928 aa15.93■□□□□ 0.14
SCFD1-224ENST00000557713 POLNQ7Z5Q5 900 aa15.93■□□□□ 0.14
SCFD1-224ENST00000557713 VASH2Q86V25 355 aa15.93■□□□□ 0.14
SCFD1-224ENST00000557713 PDCD6IPQ8WUM4 868 aaKnown RBP15.93■□□□□ 0.14
SCFD1-224ENST00000557713 COL26A1Q96A83 441 aa15.93■□□□□ 0.14
SCFD1-224ENST00000557713 SCRN2Q96FV2 425 aa15.93■□□□□ 0.14
SCFD1-224ENST00000557713 MGME1Q9BQP7 344 aa15.93■□□□□ 0.14
SCFD1-224ENST00000557713 CLMPQ9H6B4 373 aa15.93■□□□□ 0.14
SCFD1-224ENST00000557713 ZWILCHQ9H900 591 aa15.93■□□□□ 0.14
SCFD1-224ENST00000557713 RTN4Q9NQC3 1192 aaKnown RBP15.93■□□□□ 0.14
SCFD1-224ENST00000557713 SUFUQ9UMX1 484 aa15.93■□□□□ 0.14
SCFD1-224ENST00000557713 SLC17A4Q9Y2C5 497 aa15.93■□□□□ 0.14
SCFD1-224ENST00000557713 PPIL1Q9Y3C6 166 aa15.93■□□□□ 0.14
SCFD1-224ENST00000557713 PCDHB11Q9Y5F2 797 aa15.93■□□□□ 0.14
SCFD1-224ENST00000557713 PCDHGA4Q9Y5G9 962 aa15.93■□□□□ 0.14
SCFD1-224ENST00000557713 IGHV5-10-1A0A0J9YXX1 117 aa15.92■□□□□ 0.14
SCFD1-224ENST00000557713 RHPN2P1A8MT19 583 aa15.92■□□□□ 0.14
SCFD1-224ENST00000557713 H3BRJ5 948 aa15.92■□□□□ 0.14
SCFD1-224ENST00000557713 DDX3XO00571 662 aaKnown RBP eCLIP15.92■□□□□ 0.141e-13■■■■□ 23.8
SCFD1-224ENST00000557713 CYP2A6P11509 494 aaPredicted RBP15.92■□□□□ 0.14
SCFD1-224ENST00000557713 TCF4P15884 667 aa15.92■□□□□ 0.14
SCFD1-224ENST00000557713 PRKCIP41743 596 aa15.92■□□□□ 0.14
SCFD1-224ENST00000557713 GPR3P46089 330 aa15.92■□□□□ 0.14
SCFD1-224ENST00000557713 GNPDA1P46926 289 aa15.92■□□□□ 0.14
SCFD1-224ENST00000557713 CDK3Q00526 305 aa15.92■□□□□ 0.14
SCFD1-224ENST00000557713 CTBSQ01459 385 aa15.92■□□□□ 0.14
SCFD1-224ENST00000557713 DPTQ07507 201 aa15.92■□□□□ 0.14
SCFD1-224ENST00000557713 NFATC3Q12968 1075 aa15.92■□□□□ 0.14
SCFD1-224ENST00000557713 SQSTM1Q13501 440 aa15.92■□□□□ 0.14
SCFD1-224ENST00000557713 ASIC2Q16515 512 aa15.92■□□□□ 0.14
SCFD1-224ENST00000557713 BOLA3Q53S33 107 aa15.92■□□□□ 0.14
SCFD1-224ENST00000557713 RALGPS1Q5JS13 557 aa15.92■□□□□ 0.14
SCFD1-224ENST00000557713 TMEM164Q5U3C3 297 aa15.92■□□□□ 0.14
SCFD1-224ENST00000557713 E4F1Q66K89 784 aaPredicted RBP15.92■□□□□ 0.14
SCFD1-224ENST00000557713 Q6ZVL8 140 aa15.92■□□□□ 0.14
SCFD1-224ENST00000557713 TECPR1Q7Z6L1 1165 aa15.92■□□□□ 0.14
SCFD1-224ENST00000557713 NAGSQ8N159 534 aa15.92■□□□□ 0.14
SCFD1-224ENST00000557713 AOPEPQ8N6M6 819 aa15.92■□□□□ 0.14
SCFD1-224ENST00000557713 PATE1Q8WXA2 126 aa15.92■□□□□ 0.14
SCFD1-224ENST00000557713 SCARF2Q96GP6 870 aaPredicted RBP15.92■□□□□ 0.14
SCFD1-224ENST00000557713 MCCC1Q96RQ3 725 aaPredicted RBP15.92■□□□□ 0.14
SCFD1-224ENST00000557713 SEMA3CQ99985 751 aa15.92■□□□□ 0.14
SCFD1-224ENST00000557713 NUDT22Q9BRQ3 303 aa15.92■□□□□ 0.14
SCFD1-224ENST00000557713 ARHGAP9Q9BRR9 750 aa15.92■□□□□ 0.14
SCFD1-224ENST00000557713 SUDS3Q9H7L9 328 aaPredicted RBP15.92■□□□□ 0.14
SCFD1-224ENST00000557713 STARD5Q9NSY2 213 aa15.92■□□□□ 0.14
SCFD1-224ENST00000557713 SCINQ9Y6U3 715 aa15.92■□□□□ 0.14
SCFD1-224ENST00000557713 MYO18BQ8IUG5 2567 aa15.92■□□□□ 0.14
SCFD1-224ENST00000557713 NPIPB15A6NHN6 443 aaPredicted RBP15.91■□□□□ 0.14
SCFD1-224ENST00000557713 HGSO14964 777 aaPredicted RBP15.91■□□□□ 0.14
SCFD1-224ENST00000557713 PPM1DO15297 605 aa15.91■□□□□ 0.14
SCFD1-224ENST00000557713 ZW10O43264 779 aa15.91■□□□□ 0.14
SCFD1-224ENST00000557713 PGLSO95336 258 aa15.91■□□□□ 0.14
SCFD1-224ENST00000557713 IVLP07476 585 aa15.91■□□□□ 0.14
SCFD1-224ENST00000557713 NFKBIAP25963 317 aa15.91■□□□□ 0.14
SCFD1-224ENST00000557713 ADCY8P40145 1251 aa15.91■□□□□ 0.14
SCFD1-224ENST00000557713 ARL4AP40617 200 aa15.91■□□□□ 0.14
SCFD1-224ENST00000557713 ARSDP51689 593 aa15.91■□□□□ 0.14
SCFD1-224ENST00000557713 LIMK2P53671 638 aa15.91■□□□□ 0.14
SCFD1-224ENST00000557713 TBR1Q16650 682 aa15.91■□□□□ 0.14
SCFD1-224ENST00000557713 SLC30A9Q6PML9 568 aa15.91■□□□□ 0.14
SCFD1-224ENST00000557713 TMCO3Q6UWJ1 677 aa15.91■□□□□ 0.14
SCFD1-224ENST00000557713 TSPAN33Q86UF1 283 aa15.91■□□□□ 0.14
SCFD1-224ENST00000557713 RCBTB1Q8NDN9 531 aa15.91■□□□□ 0.14
SCFD1-224ENST00000557713 PIH1D2Q8WWB5 315 aa15.91■□□□□ 0.14
SCFD1-224ENST00000557713 ZNF653Q96CK0 615 aa15.91■□□□□ 0.14
SCFD1-224ENST00000557713 CSPG4P5Q96PW8 444 aa15.91■□□□□ 0.14
SCFD1-224ENST00000557713 FAM117AQ9C073 453 aa15.91■□□□□ 0.14
SCFD1-224ENST00000557713 ISCUQ9H1K1 167 aa15.91■□□□□ 0.14
SCFD1-224ENST00000557713 MRPL47Q9HD33 250 aaKnown RBP15.91■□□□□ 0.14
SCFD1-224ENST00000557713 AKAP7Q9P0M2 348 aaPredicted RBP15.91■□□□□ 0.14
SCFD1-224ENST00000557713 PLEKHM1Q9Y4G2 1056 aa15.91■□□□□ 0.14
SCFD1-224ENST00000557713 PCDHGA3Q9Y5H0 932 aa15.91■□□□□ 0.14
SCFD1-224ENST00000557713 SOD1P00441 154 aa15.9■□□□□ 0.14
SCFD1-224ENST00000557713 MYBL1P10243 752 aa15.9■□□□□ 0.14
SCFD1-224ENST00000557713 RARAP10276 462 aa15.9■□□□□ 0.14
SCFD1-224ENST00000557713 FGF3P11487 239 aaPredicted RBP15.9■□□□□ 0.14
SCFD1-224ENST00000557713 CDH6P55285 790 aa15.9■□□□□ 0.14
SCFD1-224ENST00000557713 MAXP61244 160 aa15.9■□□□□ 0.14
SCFD1-224ENST00000557713 CYP4F2P78329 520 aa15.9■□□□□ 0.14
SCFD1-224ENST00000557713 TRA2AQ13595 282 aaKnown RBP eCLIP15.9■□□□□ 0.14
SCFD1-224ENST00000557713 MARC1Q5VT66 337 aa15.9■□□□□ 0.14
SCFD1-224ENST00000557713 RAET1GQ6H3X3 334 aa15.9■□□□□ 0.14
SCFD1-224ENST00000557713 RFLNAQ6ZTI6 216 aa15.9■□□□□ 0.14
SCFD1-224ENST00000557713 PRICKLE2Q7Z3G6 844 aa15.9■□□□□ 0.14
SCFD1-224ENST00000557713 BBS5Q8N3I7 341 aa15.9■□□□□ 0.14
SCFD1-224ENST00000557713 ZSCAN1Q8NBB4 408 aa15.9■□□□□ 0.14
SCFD1-224ENST00000557713 HTR3CQ8WXA8 447 aa15.9■□□□□ 0.14
SCFD1-224ENST00000557713 CCDC74BQ96LY2 380 aa15.9■□□□□ 0.14
SCFD1-224ENST00000557713 TAAR9Q96RI9 348 aa15.9■□□□□ 0.14
SCFD1-224ENST00000557713 ABCG8Q9H221 673 aa15.9■□□□□ 0.14
SCFD1-224ENST00000557713 MYO1AQ9UBC5 1043 aa15.9■□□□□ 0.14
SCFD1-224ENST00000557713 HEMK1Q9Y5R4 338 aaPredicted RBP15.9■□□□□ 0.14
SCFD1-224ENST00000557713 ARHGEF17Q96PE2 2063 aaPredicted RBP15.9■□□□□ 0.14
SCFD1-224ENST00000557713 AHCTF1Q8WYP5 2266 aa15.89■□□□□ 0.13
SCFD1-224ENST00000557713 IGHV1OR21-1A0A087WYE8 117 aa15.89■□□□□ 0.13
SCFD1-224ENST00000557713 A0A0U1RQS6 177 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms