RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 TMEM30AQ9NV96 361 aa11.82□□□□□ -0.52
VIPAS39-211ENST00000557658 DNAJC15Q9Y5T4 150 aa11.82□□□□□ -0.52
VIPAS39-211ENST00000557658 PTCH2Q9Y6C5 1203 aa11.82□□□□□ -0.52
VIPAS39-211ENST00000557658 LTBP3Q9NS15 1303 aa11.82□□□□□ -0.52
VIPAS39-211ENST00000557658 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.81□□□□□ -0.52
VIPAS39-211ENST00000557658 MYBPHLA2RUH7 354 aa11.81□□□□□ -0.52
VIPAS39-211ENST00000557658 TRIM64BA6NI03 449 aa11.81□□□□□ -0.52
VIPAS39-211ENST00000557658 AZIN1O14977 448 aa11.81□□□□□ -0.52
VIPAS39-211ENST00000557658 PIP5K1BO14986 540 aa11.81□□□□□ -0.52
VIPAS39-211ENST00000557658 INPP4BO15327 924 aa11.81□□□□□ -0.52
VIPAS39-211ENST00000557658 FGF10O15520 208 aaPredicted RBP11.81□□□□□ -0.52
VIPAS39-211ENST00000557658 LBPP18428 481 aa11.81□□□□□ -0.52
VIPAS39-211ENST00000557658 RFC2P35250 354 aa11.81□□□□□ -0.52
VIPAS39-211ENST00000557658 KCNC1P48547 511 aa11.81□□□□□ -0.52
VIPAS39-211ENST00000557658 LHX1P48742 406 aa11.81□□□□□ -0.52
VIPAS39-211ENST00000557658 CDH13P55290 713 aa11.81□□□□□ -0.52
VIPAS39-211ENST00000557658 WNT3AP56704 352 aa11.81□□□□□ -0.52
VIPAS39-211ENST00000557658 SH3BP2P78314 561 aa11.81□□□□□ -0.52
VIPAS39-211ENST00000557658 MOGQ16653 247 aa11.81□□□□□ -0.52
VIPAS39-211ENST00000557658 CYBRD1Q53TN4 286 aa11.81□□□□□ -0.52
VIPAS39-211ENST00000557658 UBXN11Q5T124 520 aa11.81□□□□□ -0.52
VIPAS39-211ENST00000557658 C16orf87Q6PH81 154 aa11.81□□□□□ -0.52
VIPAS39-211ENST00000557658 RAB44Q7Z6P3 723 aaPredicted RBP11.81□□□□□ -0.52
VIPAS39-211ENST00000557658 CILP2Q8IUL8 1156 aa11.81□□□□□ -0.52
VIPAS39-211ENST00000557658 CPNE9Q8IYJ1 553 aa11.81□□□□□ -0.52
VIPAS39-211ENST00000557658 TBC1D21Q8IYX1 336 aa11.81□□□□□ -0.52
VIPAS39-211ENST00000557658 TWIST2Q8WVJ9 160 aa11.81□□□□□ -0.52
VIPAS39-211ENST00000557658 SENP8Q96LD8 212 aa11.81□□□□□ -0.52
VIPAS39-211ENST00000557658 TRIM54Q9BYV2 358 aa11.81□□□□□ -0.52
VIPAS39-211ENST00000557658 MID1IP1Q9NPA3 183 aa11.81□□□□□ -0.52
VIPAS39-211ENST00000557658 SLC38A7Q9NVC3 462 aa11.81□□□□□ -0.52
VIPAS39-211ENST00000557658 ANAPC2Q9UJX6 822 aa11.81□□□□□ -0.52
VIPAS39-211ENST00000557658 DSEQ9UL01 958 aa11.81□□□□□ -0.52
VIPAS39-211ENST00000557658 NEU3Q9UQ49 428 aa11.81□□□□□ -0.52
VIPAS39-211ENST00000557658 PCDHA9Q9Y5H5 950 aa11.81□□□□□ -0.52
VIPAS39-211ENST00000557658 HHLA1C9JL84 531 aa11.81□□□□□ -0.52
VIPAS39-211ENST00000557658 CDK14O94921 469 aa11.81□□□□□ -0.52
VIPAS39-211ENST00000557658 ZBTB11O95625 1053 aaPredicted RBP11.81□□□□□ -0.52
VIPAS39-211ENST00000557658 INHBBP09529 407 aa11.81□□□□□ -0.52
VIPAS39-211ENST00000557658 OCM2P0CE71 109 aa11.81□□□□□ -0.52
VIPAS39-211ENST00000557658 OCMP0CE72 109 aaPredicted RBP11.81□□□□□ -0.52
VIPAS39-211ENST00000557658 UMPSP11172 480 aa11.81□□□□□ -0.52
VIPAS39-211ENST00000557658 UGT1A1P22309 533 aa11.81□□□□□ -0.52
VIPAS39-211ENST00000557658 UGT1A4P22310 534 aa11.81□□□□□ -0.52
VIPAS39-211ENST00000557658 UGT1A3P35503 534 aa11.81□□□□□ -0.52
VIPAS39-211ENST00000557658 UGT1A5P35504 534 aa11.81□□□□□ -0.52
VIPAS39-211ENST00000557658 SERPINH1P50454 418 aaKnown RBP11.81□□□□□ -0.52
VIPAS39-211ENST00000557658 HLCSP50747 726 aa11.81□□□□□ -0.52
VIPAS39-211ENST00000557658 GRSF1Q12849 480 aaKnown RBP eCLIP11.81□□□□□ -0.52
VIPAS39-211ENST00000557658 GRB7Q14451 532 aa11.81□□□□□ -0.52
VIPAS39-211ENST00000557658 NEDD8Q15843 81 aa11.81□□□□□ -0.52
VIPAS39-211ENST00000557658 ZNF792Q3KQV3 632 aa11.81□□□□□ -0.52
VIPAS39-211ENST00000557658 PDCD4Q53EL6 469 aaKnown RBP11.81□□□□□ -0.52
VIPAS39-211ENST00000557658 CCNYL2Q5T2Q4 361 aa11.81□□□□□ -0.52
VIPAS39-211ENST00000557658 TMEM207Q6UWW9 146 aa11.81□□□□□ -0.52
VIPAS39-211ENST00000557658 XKR5Q6UX68 686 aa11.81□□□□□ -0.52
VIPAS39-211ENST00000557658 TMEM86AQ8N2M4 240 aa11.81□□□□□ -0.52
VIPAS39-211ENST00000557658 PTGR2Q8N8N7 351 aaPredicted RBP11.81□□□□□ -0.52
VIPAS39-211ENST00000557658 MAGEE2Q8TD90 523 aaPredicted RBP11.81□□□□□ -0.52
VIPAS39-211ENST00000557658 DQX1Q8TE96 717 aaKnown RBP11.81□□□□□ -0.52
VIPAS39-211ENST00000557658 EXT2Q93063 718 aa11.81□□□□□ -0.52
VIPAS39-211ENST00000557658 TUBGCP3Q96CW5 907 aa11.81□□□□□ -0.52
VIPAS39-211ENST00000557658 CCDC68Q9H2F9 335 aa11.81□□□□□ -0.52
VIPAS39-211ENST00000557658 ARNT2Q9HBZ2 717 aa11.81□□□□□ -0.52
VIPAS39-211ENST00000557658 PALMDQ9NP74 551 aa11.81□□□□□ -0.52
VIPAS39-211ENST00000557658 SDR39U1Q9NRG7 319 aaPredicted RBP11.81□□□□□ -0.52
VIPAS39-211ENST00000557658 INTS10Q9NVR2 710 aaKnown RBP11.81□□□□□ -0.52
VIPAS39-211ENST00000557658 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.81□□□□□ -0.52
VIPAS39-211ENST00000557658 GIMAP2Q9UG22 337 aa11.81□□□□□ -0.52
VIPAS39-211ENST00000557658 COQ6Q9Y2Z9 468 aa11.81□□□□□ -0.52
VIPAS39-211ENST00000557658 IPPQ9Y573 584 aa11.81□□□□□ -0.52
VIPAS39-211ENST00000557658 BRCA1P38398 1863 aaKnown RBP11.8□□□□□ -0.52
VIPAS39-211ENST00000557658 SMIM35A0A1B0GVV1 85 aa11.8□□□□□ -0.52
VIPAS39-211ENST00000557658 PAPSS2O95340 614 aaPredicted RBP11.8□□□□□ -0.52
VIPAS39-211ENST00000557658 WISP3O95389 354 aaPredicted RBP11.8□□□□□ -0.52
VIPAS39-211ENST00000557658 LDLRP01130 860 aa11.8□□□□□ -0.52
VIPAS39-211ENST00000557658 CHRM3P20309 590 aa11.8□□□□□ -0.52
VIPAS39-211ENST00000557658 HTR7P34969 479 aa11.8□□□□□ -0.52
VIPAS39-211ENST00000557658 GSK3BP49841 420 aa11.8□□□□□ -0.52
VIPAS39-211ENST00000557658 CDKN2DP55273 166 aa11.8□□□□□ -0.52
VIPAS39-211ENST00000557658 AASDHQ4L235 1098 aaPredicted RBP11.8□□□□□ -0.52
VIPAS39-211ENST00000557658 NOMO2Q5JPE7 1267 aa11.8□□□□□ -0.52
VIPAS39-211ENST00000557658 DCDC5Q6ZRR9 648 aa11.8□□□□□ -0.52
VIPAS39-211ENST00000557658 DCP1BQ8IZD4 617 aaKnown RBP11.8□□□□□ -0.52
VIPAS39-211ENST00000557658 ARRDC4Q8NCT1 418 aa11.8□□□□□ -0.52
VIPAS39-211ENST00000557658 OR6P1Q8NGX9 317 aa11.8□□□□□ -0.52
VIPAS39-211ENST00000557658 TMEM125Q96AQ2 219 aa11.8□□□□□ -0.52
VIPAS39-211ENST00000557658 SMARCD1Q96GM5 515 aa11.8□□□□□ -0.52
VIPAS39-211ENST00000557658 CYP2S1Q96SQ9 504 aa11.8□□□□□ -0.52
VIPAS39-211ENST00000557658 ALG2Q9H553 416 aa11.8□□□□□ -0.52
VIPAS39-211ENST00000557658 PTGDR2Q9Y5Y4 395 aa11.8□□□□□ -0.52
VIPAS39-211ENST00000557658 C9JVG2 144 aa11.8□□□□□ -0.52
VIPAS39-211ENST00000557658 SLC7A4O43246 635 aa11.8□□□□□ -0.52
VIPAS39-211ENST00000557658 COQ9O75208 318 aa11.8□□□□□ -0.52
VIPAS39-211ENST00000557658 MTHFD1P11586 935 aaKnown RBP11.8□□□□□ -0.52
VIPAS39-211ENST00000557658 HGFP14210 728 aa11.8□□□□□ -0.52
VIPAS39-211ENST00000557658 IDO1P14902 403 aa11.8□□□□□ -0.52
VIPAS39-211ENST00000557658 CD247P20963 164 aa11.8□□□□□ -0.52
VIPAS39-211ENST00000557658 MAP4P27816 1152 aaKnown RBP11.8□□□□□ -0.52
VIPAS39-211ENST00000557658 PHEXP78562 749 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms