RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 MCM3P25205 808 aa4.77□□□□□ -1.65
PRPF39-212ENST00000557477 ACSL1P33121 698 aa4.77□□□□□ -1.65
PRPF39-212ENST00000557477 CBSP35520 551 aa4.77□□□□□ -1.65
PRPF39-212ENST00000557477 THPOP40225 353 aa4.77□□□□□ -1.65
PRPF39-212ENST00000557477 PSMB10P40306 273 aa4.77□□□□□ -1.65
PRPF39-212ENST00000557477 RAD52P43351 418 aa4.77□□□□□ -1.65
PRPF39-212ENST00000557477 MMP13P45452 471 aa4.77□□□□□ -1.65
PRPF39-212ENST00000557477 CDH8P55286 799 aa4.77□□□□□ -1.65
PRPF39-212ENST00000557477 P2RX3P56373 397 aa4.77□□□□□ -1.65
PRPF39-212ENST00000557477 IRF3Q14653 427 aa4.77□□□□□ -1.65
PRPF39-212ENST00000557477 DRAP1Q14919 205 aaPredicted RBP4.77□□□□□ -1.65
PRPF39-212ENST00000557477 WTAPQ15007 396 aa4.77□□□□□ -1.65
PRPF39-212ENST00000557477 Q5PR19 223 aa4.77□□□□□ -1.65
PRPF39-212ENST00000557477 TMEM154Q6P9G4 183 aa4.77□□□□□ -1.65
PRPF39-212ENST00000557477 SYCE2Q6PIF2 218 aa4.77□□□□□ -1.65
PRPF39-212ENST00000557477 CLEC17AQ6ZS10 378 aa4.77□□□□□ -1.65
PRPF39-212ENST00000557477 CHST9Q7L1S5 443 aa4.77□□□□□ -1.65
PRPF39-212ENST00000557477 GSTA5Q7RTV2 222 aa4.77□□□□□ -1.65
PRPF39-212ENST00000557477 RPAP2Q8IXW5 612 aaPredicted RBP4.77□□□□□ -1.65
PRPF39-212ENST00000557477 CCDC13Q8IYE1 715 aa4.77□□□□□ -1.65
PRPF39-212ENST00000557477 ZBTB2Q8N680 514 aa4.77□□□□□ -1.65
PRPF39-212ENST00000557477 TEX45Q8NA69 505 aa4.77□□□□□ -1.65
PRPF39-212ENST00000557477 HUS1BQ8NHY5 278 aa4.77□□□□□ -1.65
PRPF39-212ENST00000557477 SLC35F5Q8WV83 523 aa4.77□□□□□ -1.65
PRPF39-212ENST00000557477 ZKSCAN4Q969J2 545 aaPredicted RBP4.77□□□□□ -1.65
PRPF39-212ENST00000557477 ERGIC1Q969X5 290 aa4.77□□□□□ -1.65
PRPF39-212ENST00000557477 APOLD1Q96LR9 279 aa4.77□□□□□ -1.65
PRPF39-212ENST00000557477 SH2D4AQ9H788 454 aa4.77□□□□□ -1.65
PRPF39-212ENST00000557477 CYSLTR2Q9NS75 346 aa4.77□□□□□ -1.65
PRPF39-212ENST00000557477 ZBTB40Q9NUA8 1239 aa4.77□□□□□ -1.65
PRPF39-212ENST00000557477 DECR2Q9NUI1 292 aa4.77□□□□□ -1.65
PRPF39-212ENST00000557477 BCCIPQ9P287 314 aaKnown RBP eCLIP4.77□□□□□ -1.65
PRPF39-212ENST00000557477 RAI2Q9Y5P3 530 aa4.77□□□□□ -1.65
PRPF39-212ENST00000557477 DAPK1P53355 1430 aa4.77□□□□□ -1.65
PRPF39-212ENST00000557477 ARHGAP31Q2M1Z3 1444 aa4.77□□□□□ -1.65
PRPF39-212ENST00000557477 PLEKHG1Q9ULL1 1385 aa4.77□□□□□ -1.65
PRPF39-212ENST00000557477 TRPM2O94759 1503 aa4.77□□□□□ -1.65
PRPF39-212ENST00000557477 ASXL1Q8IXJ9 1541 aa4.77□□□□□ -1.65
PRPF39-212ENST00000557477 ZNF804BA4D1E1 1349 aa4.76□□□□□ -1.65
PRPF39-212ENST00000557477 UTYO14607 1347 aa4.76□□□□□ -1.65
PRPF39-212ENST00000557477 CDK12Q9NYV4 1490 aaPredicted RBP4.76□□□□□ -1.65
PRPF39-212ENST00000557477 GAGE12JA6NER3 117 aa4.76□□□□□ -1.65
PRPF39-212ENST00000557477 I6L893 689 aaPredicted RBP4.76□□□□□ -1.65
PRPF39-212ENST00000557477 CHL1O00533 1208 aa4.76□□□□□ -1.65
PRPF39-212ENST00000557477 TIMM44O43615 452 aa4.76□□□□□ -1.65
PRPF39-212ENST00000557477 ZC3H11AO75152 810 aaKnown RBP eCLIP4.76□□□□□ -1.65
PRPF39-212ENST00000557477 FGBP02675 491 aa4.76□□□□□ -1.65
PRPF39-212ENST00000557477 CLTBP09497 229 aa4.76□□□□□ -1.65
PRPF39-212ENST00000557477 ALDH7A1P49419 539 aaKnown RBP4.76□□□□□ -1.65
PRPF39-212ENST00000557477 SNX16P57768 344 aa4.76□□□□□ -1.65
PRPF39-212ENST00000557477 SORDQ00796 357 aa4.76□□□□□ -1.65
PRPF39-212ENST00000557477 CHAF1BQ13112 559 aa4.76□□□□□ -1.65
PRPF39-212ENST00000557477 ITGADQ13349 1161 aa4.76□□□□□ -1.65
PRPF39-212ENST00000557477 DIP2AQ14689 1571 aa4.76□□□□□ -1.65
PRPF39-212ENST00000557477 RABEP1Q15276 862 aa4.76□□□□□ -1.65
PRPF39-212ENST00000557477 ASTE1Q2TB18 679 aaPredicted RBP4.76□□□□□ -1.65
PRPF39-212ENST00000557477 ZNF284Q2VY69 593 aa4.76□□□□□ -1.65
PRPF39-212ENST00000557477 SARM1Q6SZW1 724 aa4.76□□□□□ -1.65
PRPF39-212ENST00000557477 PARM1Q6UWI2 310 aa4.76□□□□□ -1.65
PRPF39-212ENST00000557477 CTU1Q7Z7A3 348 aaKnown RBP4.76□□□□□ -1.65
PRPF39-212ENST00000557477 HAPLN4Q86UW8 402 aa4.76□□□□□ -1.65
PRPF39-212ENST00000557477 SFTPA2Q8IWL1 248 aa4.76□□□□□ -1.65
PRPF39-212ENST00000557477 MB21D2Q8IYB1 491 aaPredicted RBP4.76□□□□□ -1.65
PRPF39-212ENST00000557477 MMP21Q8N119 569 aa4.76□□□□□ -1.65
PRPF39-212ENST00000557477 C17orf53Q8N3J3 647 aaPredicted RBP4.76□□□□□ -1.65
PRPF39-212ENST00000557477 VPS8Q8N3P4 1428 aa4.76□□□□□ -1.65
PRPF39-212ENST00000557477 ARFGAP1Q8N6T3 406 aa4.76□□□□□ -1.65
PRPF39-212ENST00000557477 GABPB2Q8TAK5 448 aaPredicted RBP4.76□□□□□ -1.65
PRPF39-212ENST00000557477 POMGNT1Q8WZA1 660 aa4.76□□□□□ -1.65
PRPF39-212ENST00000557477 ARHGEF26Q96DR7 871 aa4.76□□□□□ -1.65
PRPF39-212ENST00000557477 NAP1L5Q96NT1 182 aaPredicted RBP4.76□□□□□ -1.65
PRPF39-212ENST00000557477 MXD3Q9BW11 206 aa4.76□□□□□ -1.65
PRPF39-212ENST00000557477 FZD3Q9NPG1 666 aa4.76□□□□□ -1.65
PRPF39-212ENST00000557477 SIRT3Q9NTG7 399 aaPredicted RBP4.76□□□□□ -1.65
PRPF39-212ENST00000557477 ANKEF1Q9NU02 776 aa4.76□□□□□ -1.65
PRPF39-212ENST00000557477 CISD1Q9NZ45 108 aaKnown RBP4.76□□□□□ -1.65
PRPF39-212ENST00000557477 HS3ST3B1Q9Y662 390 aa4.76□□□□□ -1.65
PRPF39-212ENST00000557477 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.75□□□□□ -1.65
PRPF39-212ENST00000557477 H0YGN5 161 aa4.75□□□□□ -1.65
PRPF39-212ENST00000557477 TMCC2O75069 709 aa4.75□□□□□ -1.65
PRPF39-212ENST00000557477 MMP2P08253 660 aa4.75□□□□□ -1.65
PRPF39-212ENST00000557477 GABRB1P18505 474 aa4.75□□□□□ -1.65
PRPF39-212ENST00000557477 ABCG1P45844 678 aa4.75□□□□□ -1.65
PRPF39-212ENST00000557477 CLCN3P51790 818 aa4.75□□□□□ -1.65
PRPF39-212ENST00000557477 PSMC6P62333 389 aa4.75□□□□□ -1.65
PRPF39-212ENST00000557477 NUCB1Q02818 461 aa4.75□□□□□ -1.65
PRPF39-212ENST00000557477 CRYMQ14894 314 aa4.75□□□□□ -1.65
PRPF39-212ENST00000557477 PTGR1Q14914 329 aa4.75□□□□□ -1.65
PRPF39-212ENST00000557477 ETFDHQ16134 617 aa4.75□□□□□ -1.65
PRPF39-212ENST00000557477 C2orf68Q2NKX9 166 aa4.75□□□□□ -1.65
PRPF39-212ENST00000557477 WASHC2DQ5SRD0 308 aa4.75□□□□□ -1.65
PRPF39-212ENST00000557477 KIAA0930Q6ICG6 404 aaPredicted RBP4.75□□□□□ -1.65
PRPF39-212ENST00000557477 DPY19L2P1Q6NXN4 242 aa4.75□□□□□ -1.65
PRPF39-212ENST00000557477 Q6ZSV7 163 aa4.75□□□□□ -1.65
PRPF39-212ENST00000557477 TRAPPC11Q7Z392 1133 aa4.75□□□□□ -1.65
PRPF39-212ENST00000557477 ADGRF2Q8IZF7 708 aa4.75□□□□□ -1.65
PRPF39-212ENST00000557477 TMEM199Q8N511 208 aa4.75□□□□□ -1.65
PRPF39-212ENST00000557477 MPLKIPQ8TAP9 179 aa4.75□□□□□ -1.65
PRPF39-212ENST00000557477 ARRDC2Q8TBH0 407 aa4.75□□□□□ -1.65
PRPF39-212ENST00000557477 TMEM163Q8TC26 289 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms