RNA–Protein interactions for RNA: ENST00000557336.1

HNRNPC-231, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), human

TSL 3

Gene HNRNPC, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPC-231	ENST00000557336	TYRO3	Q06418	890 aa		11.17	□□□□□ -0.62
HNRNPC-231	ENST00000557336	TRAF2	Q12933	501 aa		11.17	□□□□□ -0.62
HNRNPC-231	ENST00000557336	EIF3I	Q13347	325 aa	Known RBP	11.17	□□□□□ -0.62
HNRNPC-231	ENST00000557336	LBR	Q14739	615 aa	Known RBP	11.17	□□□□□ -0.62
HNRNPC-231	ENST00000557336	C16orf72	Q14CZ0	275 aa		11.17	□□□□□ -0.62
HNRNPC-231	ENST00000557336	DPYSL2	Q16555	572 aa		11.17	□□□□□ -0.62
HNRNPC-231	ENST00000557336	ZSCAN23	Q3MJ62	389 aa		11.17	□□□□□ -0.62
HNRNPC-231	ENST00000557336	CFAP58	Q5T655	872 aa		11.17	□□□□□ -0.62
HNRNPC-231	ENST00000557336	TMCO4	Q5TGY1	634 aa		11.17	□□□□□ -0.62
HNRNPC-231	ENST00000557336	SPECC1L	Q69YQ0	1117 aa		11.17	□□□□□ -0.62
HNRNPC-231	ENST00000557336	ZNF438	Q7Z4V0	828 aa		11.17	□□□□□ -0.62
HNRNPC-231	ENST00000557336	POLN	Q7Z5Q5	900 aa		11.17	□□□□□ -0.62
HNRNPC-231	ENST00000557336	DTX1	Q86Y01	620 aa		11.17	□□□□□ -0.62
HNRNPC-231	ENST00000557336	MED8	Q96G25	268 aa		11.17	□□□□□ -0.62
HNRNPC-231	ENST00000557336	NAP1L5	Q96NT1	182 aa	Predicted RBP	11.17	□□□□□ -0.62
HNRNPC-231	ENST00000557336	FRMD8	Q9BZ67	464 aa	Predicted RBP	11.17	□□□□□ -0.62
HNRNPC-231	ENST00000557336	SP110	Q9HB58	689 aa		11.17	□□□□□ -0.62
HNRNPC-231	ENST00000557336	DONSON	Q9NYP3	566 aa		11.17	□□□□□ -0.62
HNRNPC-231	ENST00000557336	FOXJ2	Q9P0K8	574 aa		11.17	□□□□□ -0.62
HNRNPC-231	ENST00000557336	CNOT8	Q9UFF9	292 aa	Known RBP	11.17	□□□□□ -0.62
HNRNPC-231	ENST00000557336	PISD	Q9UG56	409 aa		11.17	□□□□□ -0.62
HNRNPC-231	ENST00000557336	SEPT3	Q9UH03	358 aa		11.17	□□□□□ -0.62
HNRNPC-231	ENST00000557336	LOXL2	Q9Y4K0	774 aa		11.17	□□□□□ -0.62
HNRNPC-231	ENST00000557336	RELN	P78509	3460 aa		11.17	□□□□□ -0.62
HNRNPC-231	ENST00000557336	PTPN13	Q12923	2485 aa		11.16	□□□□□ -0.62
HNRNPC-231	ENST00000557336	PRAMEF33	A0A0G2JMD5	474 aa		11.16	□□□□□ -0.62
HNRNPC-231	ENST00000557336	NPIPB15	A6NHN6	443 aa	Predicted RBP	11.16	□□□□□ -0.62
HNRNPC-231	ENST00000557336	CYSRT1	A8MQ03	144 aa		11.16	□□□□□ -0.62
HNRNPC-231	ENST00000557336		B4DGG1	531 aa		11.16	□□□□□ -0.62
HNRNPC-231	ENST00000557336	CFAP99	D6REC4	459 aa		11.16	□□□□□ -0.62
HNRNPC-231	ENST00000557336		J3QKU1	62 aa		11.16	□□□□□ -0.62
HNRNPC-231	ENST00000557336	DAPK3	O43293	454 aa		11.16	□□□□□ -0.62
HNRNPC-231	ENST00000557336	NUDT21	O43809	227 aa	Known RBP	11.16	□□□□□ -0.62
HNRNPC-231	ENST00000557336	PRPSAP2	O60256	369 aa		11.16	□□□□□ -0.62
HNRNPC-231	ENST00000557336	PRAMEF10	O60809	474 aa		11.16	□□□□□ -0.62
HNRNPC-231	ENST00000557336	SOD1	P00441	154 aa		11.16	□□□□□ -0.62
HNRNPC-231	ENST00000557336	SKIL	P12757	684 aa		11.16	□□□□□ -0.62
HNRNPC-231	ENST00000557336	CCNB1	P14635	433 aa		11.16	□□□□□ -0.62
HNRNPC-231	ENST00000557336	IL4R	P24394	825 aa		11.16	□□□□□ -0.62
HNRNPC-231	ENST00000557336	PCK1	P35558	622 aa		11.16	□□□□□ -0.62
HNRNPC-231	ENST00000557336	ETV3	P41162	512 aa		11.16	□□□□□ -0.62
HNRNPC-231	ENST00000557336	POLD2	P49005	469 aa		11.16	□□□□□ -0.62
HNRNPC-231	ENST00000557336	OR1D5	P58170	312 aa		11.16	□□□□□ -0.62
HNRNPC-231	ENST00000557336	POLR2L	P62875	67 aa	Known RBP	11.16	□□□□□ -0.62
HNRNPC-231	ENST00000557336	NR1D2	Q14995	579 aa		11.16	□□□□□ -0.62
HNRNPC-231	ENST00000557336	ACOX1	Q15067	660 aa		11.16	□□□□□ -0.62
HNRNPC-231	ENST00000557336		Q6ZVL8	140 aa		11.16	□□□□□ -0.62
HNRNPC-231	ENST00000557336	TECPR1	Q7Z6L1	1165 aa		11.16	□□□□□ -0.62
HNRNPC-231	ENST00000557336	TSPAN33	Q86UF1	283 aa		11.16	□□□□□ -0.62
HNRNPC-231	ENST00000557336	RETREG3	Q86VR2	466 aa		11.16	□□□□□ -0.62
HNRNPC-231	ENST00000557336	ZFAND4	Q86XD8	727 aa		11.16	□□□□□ -0.62
HNRNPC-231	ENST00000557336	ANKRD20A12P	Q8NF67	263 aa		11.16	□□□□□ -0.62
HNRNPC-231	ENST00000557336	ATL2	Q8NHH9	583 aa		11.16	□□□□□ -0.62
HNRNPC-231	ENST00000557336	PATE1	Q8WXA2	126 aa		11.16	□□□□□ -0.62
HNRNPC-231	ENST00000557336	DTD2	Q96FN9	168 aa		11.16	□□□□□ -0.62
HNRNPC-231	ENST00000557336	TMEM74	Q96NL1	305 aa		11.16	□□□□□ -0.62
HNRNPC-231	ENST00000557336	ZNF599	Q96NL3	588 aa		11.16	□□□□□ -0.62
HNRNPC-231	ENST00000557336	CSPG4P5	Q96PW8	444 aa		11.16	□□□□□ -0.62
HNRNPC-231	ENST00000557336	MCCC1	Q96RQ3	725 aa	Predicted RBP	11.16	□□□□□ -0.62
HNRNPC-231	ENST00000557336	NUDCD1	Q96RS6	583 aa		11.16	□□□□□ -0.62
HNRNPC-231	ENST00000557336	MGME1	Q9BQP7	344 aa		11.16	□□□□□ -0.62
HNRNPC-231	ENST00000557336	STRADB	Q9C0K7	418 aa		11.16	□□□□□ -0.62
HNRNPC-231	ENST00000557336	ISCU	Q9H1K1	167 aa		11.16	□□□□□ -0.62
HNRNPC-231	ENST00000557336	DPEP2	Q9H4A9	486 aa		11.16	□□□□□ -0.62
HNRNPC-231	ENST00000557336	WDR26	Q9H7D7	661 aa		11.16	□□□□□ -0.62
HNRNPC-231	ENST00000557336	RDH14	Q9HBH5	336 aa		11.16	□□□□□ -0.62
HNRNPC-231	ENST00000557336	TMEM63C	Q9P1W3	806 aa		11.16	□□□□□ -0.62
HNRNPC-231	ENST00000557336	PPIL1	Q9Y3C6	166 aa		11.16	□□□□□ -0.62
HNRNPC-231	ENST00000557336	PLEKHM1	Q9Y4G2	1056 aa		11.16	□□□□□ -0.62
HNRNPC-231	ENST00000557336	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	11.15	□□□□□ -0.62
HNRNPC-231	ENST00000557336	CAPN8	A6NHC0	703 aa		11.15	□□□□□ -0.62
HNRNPC-231	ENST00000557336	TMX2-CTNND1	H3BSU7	103 aa		11.15	□□□□□ -0.62
HNRNPC-231	ENST00000557336	FZD6	O60353	706 aa		11.15	□□□□□ -0.62
HNRNPC-231	ENST00000557336	SOCS5	O75159	536 aa		11.15	□□□□□ -0.62
HNRNPC-231	ENST00000557336	RNF8	O76064	485 aa		11.15	□□□□□ -0.62
HNRNPC-231	ENST00000557336	PDHA1	P08559	390 aa		11.15	□□□□□ -0.62
HNRNPC-231	ENST00000557336	CCDC172	P0C7W6	258 aa		11.15	□□□□□ -0.62
HNRNPC-231	ENST00000557336	RARA	P10276	462 aa		11.15	□□□□□ -0.62
HNRNPC-231	ENST00000557336	MYCLP1	P12525	358 aa	Predicted RBP	11.15	□□□□□ -0.62
HNRNPC-231	ENST00000557336	CCL4	P13236	92 aa		11.15	□□□□□ -0.62
HNRNPC-231	ENST00000557336	ITGB6	P18564	788 aa		11.15	□□□□□ -0.62
HNRNPC-231	ENST00000557336	KEL	P23276	732 aa		11.15	□□□□□ -0.62
HNRNPC-231	ENST00000557336	AK4	P27144	223 aa	Predicted RBP	11.15	□□□□□ -0.62
HNRNPC-231	ENST00000557336	CD1C	P29017	333 aa		11.15	□□□□□ -0.62
HNRNPC-231	ENST00000557336	VIPR1	P32241	457 aa		11.15	□□□□□ -0.62
HNRNPC-231	ENST00000557336	MAX	P61244	160 aa		11.15	□□□□□ -0.62
HNRNPC-231	ENST00000557336	ASIC2	Q16515	512 aa		11.15	□□□□□ -0.62
HNRNPC-231	ENST00000557336	SMTNL2	Q2TAL5	461 aa		11.15	□□□□□ -0.62
HNRNPC-231	ENST00000557336	HGSNAT	Q68CP4	663 aa		11.15	□□□□□ -0.62
HNRNPC-231	ENST00000557336	HEATR4	Q86WZ0	1026 aa		11.15	□□□□□ -0.62
HNRNPC-231	ENST00000557336	CPNE8	Q86YQ8	564 aa		11.15	□□□□□ -0.62
HNRNPC-231	ENST00000557336	JAML	Q86YT9	394 aa		11.15	□□□□□ -0.62
HNRNPC-231	ENST00000557336	LZTR1	Q8N653	840 aa		11.15	□□□□□ -0.62
HNRNPC-231	ENST00000557336	PRR7	Q8TB68	274 aa		11.15	□□□□□ -0.62
HNRNPC-231	ENST00000557336	PIH1D2	Q8WWB5	315 aa		11.15	□□□□□ -0.62
HNRNPC-231	ENST00000557336	USP7	Q93009	1102 aa		11.15	□□□□□ -0.62
HNRNPC-231	ENST00000557336	PMEPA1	Q969W9	287 aa		11.15	□□□□□ -0.62
HNRNPC-231	ENST00000557336	ZNF653	Q96CK0	615 aa		11.15	□□□□□ -0.62
HNRNPC-231	ENST00000557336	NUS1	Q96E22	293 aa		11.15	□□□□□ -0.62
HNRNPC-231	ENST00000557336	SCRN2	Q96FV2	425 aa		11.15	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms