RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 SLC41A1Q8IVJ1 513 aa7.63□□□□□ -1.19
TDP1-214ENST00000556063 CBARPQ8N350 705 aaPredicted RBP7.63□□□□□ -1.19
TDP1-214ENST00000556063 NAT8LQ8N9F0 302 aa7.63□□□□□ -1.19
TDP1-214ENST00000556063 CEP76Q8TAP6 659 aa7.63□□□□□ -1.19
TDP1-214ENST00000556063 STYXQ8WUJ0 223 aa7.63□□□□□ -1.19
TDP1-214ENST00000556063 PTCD2Q8WV60 388 aaKnown RBP7.63□□□□□ -1.19
TDP1-214ENST00000556063 PIGKQ92643 395 aa7.63□□□□□ -1.19
TDP1-214ENST00000556063 KLK6Q92876 244 aa7.63□□□□□ -1.19
TDP1-214ENST00000556063 PEX13Q92968 403 aa7.63□□□□□ -1.19
TDP1-214ENST00000556063 AP2M1Q96CW1 435 aa7.63□□□□□ -1.19
TDP1-214ENST00000556063 NUS1Q96E22 293 aa7.63□□□□□ -1.19
TDP1-214ENST00000556063 DTD2Q96FN9 168 aa7.63□□□□□ -1.19
TDP1-214ENST00000556063 LENG8Q96PV6 779 aaPredicted RBP7.63□□□□□ -1.19
TDP1-214ENST00000556063 RANBP9Q96S59 729 aa7.63□□□□□ -1.19
TDP1-214ENST00000556063 NAT9Q9BTE0 207 aa7.63□□□□□ -1.19
TDP1-214ENST00000556063 LRRC1Q9BTT6 524 aa7.63□□□□□ -1.19
TDP1-214ENST00000556063 FAM129AQ9BZQ8 928 aa7.63□□□□□ -1.19
TDP1-214ENST00000556063 FOXP3Q9BZS1 431 aa7.63□□□□□ -1.19
TDP1-214ENST00000556063 DPH5Q9H2P9 285 aa7.63□□□□□ -1.19
TDP1-214ENST00000556063 FAM83DQ9H4H8 585 aa7.63□□□□□ -1.19
TDP1-214ENST00000556063 AASDHPPTQ9NRN7 309 aa7.63□□□□□ -1.19
TDP1-214ENST00000556063 FAM114A2Q9NRY5 505 aa7.63□□□□□ -1.19
TDP1-214ENST00000556063 EIF2B4Q9UI10 523 aaKnown RBP7.63□□□□□ -1.19
TDP1-214ENST00000556063 APPL1Q9UKG1 709 aa7.63□□□□□ -1.19
TDP1-214ENST00000556063 SMG5Q9UPR3 1016 aaKnown RBP7.63□□□□□ -1.19
TDP1-214ENST00000556063 ZFR2Q9UPR6 939 aaKnown RBP7.63□□□□□ -1.19
TDP1-214ENST00000556063 SNX24Q9Y343 169 aa7.63□□□□□ -1.19
TDP1-214ENST00000556063 SPO11Q9Y5K1 396 aa7.63□□□□□ -1.19
TDP1-214ENST00000556063 HS3ST3A1Q9Y663 406 aa7.63□□□□□ -1.19
TDP1-214ENST00000556063 EP300Q09472 2414 aaPredicted RBP7.63□□□□□ -1.19
TDP1-214ENST00000556063 FAM186AA6NE01 2351 aa7.63□□□□□ -1.19
TDP1-214ENST00000556063 A0A0C4DFX4 3053 aa7.63□□□□□ -1.19
TDP1-214ENST00000556063 TRIOO75962 3097 aa7.62□□□□□ -1.19
TDP1-214ENST00000556063 A6NNZ2 444 aa7.62□□□□□ -1.19
TDP1-214ENST00000556063 GOLGA8MH3BSY2 632 aa7.62□□□□□ -1.19
TDP1-214ENST00000556063 BCAT2O15382 392 aaPredicted RBP7.62□□□□□ -1.19
TDP1-214ENST00000556063 TMEM63AO94886 807 aa7.62□□□□□ -1.19
TDP1-214ENST00000556063 SLU7O95391 586 aaKnown RBP7.62□□□□□ -1.19
TDP1-214ENST00000556063 LMNAP02545 664 aaKnown RBP7.62□□□□□ -1.19
TDP1-214ENST00000556063 RETP07949 1114 aa7.62□□□□□ -1.19
TDP1-214ENST00000556063 C1SP09871 688 aa7.62□□□□□ -1.19
TDP1-214ENST00000556063 TSHRP16473 764 aa7.62□□□□□ -1.19
TDP1-214ENST00000556063 PAMP19021 973 aa7.62□□□□□ -1.19
TDP1-214ENST00000556063 KELP23276 732 aa7.62□□□□□ -1.19
TDP1-214ENST00000556063 ITPKAP23677 461 aa7.62□□□□□ -1.19
TDP1-214ENST00000556063 IVDP26440 423 aa7.62□□□□□ -1.19
TDP1-214ENST00000556063 HTR1BP28222 390 aa7.62□□□□□ -1.19
TDP1-214ENST00000556063 TEAD1P28347 426 aa7.62□□□□□ -1.19
TDP1-214ENST00000556063 CD38P28907 300 aa7.62□□□□□ -1.19
TDP1-214ENST00000556063 SPAM1P38567 509 aa7.62□□□□□ -1.19
TDP1-214ENST00000556063 ETV3P41162 512 aa7.62□□□□□ -1.19
TDP1-214ENST00000556063 GPR1P46091 355 aa7.62□□□□□ -1.19
TDP1-214ENST00000556063 RPL21P46778 160 aaKnown RBP7.62□□□□□ -1.19
TDP1-214ENST00000556063 SPINT3P49223 89 aa7.62□□□□□ -1.19
TDP1-214ENST00000556063 AFF3P51826 1226 aaKnown RBP7.62□□□□□ -1.19
TDP1-214ENST00000556063 ITGA8P53708 1063 aa7.62□□□□□ -1.19
TDP1-214ENST00000556063 DCDC1P59894 354 aa7.62□□□□□ -1.19
TDP1-214ENST00000556063 YPEL5P62699 121 aa7.62□□□□□ -1.19
TDP1-214ENST00000556063 MRPS25P82663 173 aaKnown RBP7.62□□□□□ -1.19
TDP1-214ENST00000556063 SLC7A5Q01650 507 aa7.62□□□□□ -1.19
TDP1-214ENST00000556063 GUCY2DQ02846 1103 aa7.62□□□□□ -1.19
TDP1-214ENST00000556063 DPTQ07507 201 aa7.62□□□□□ -1.19
TDP1-214ENST00000556063 MTM1Q13496 603 aa7.62□□□□□ -1.19
TDP1-214ENST00000556063 OLIG2Q13516 323 aa7.62□□□□□ -1.19
TDP1-214ENST00000556063 POU6F1Q14863 301 aa7.62□□□□□ -1.19
TDP1-214ENST00000556063 HIF1AQ16665 826 aa7.62□□□□□ -1.19
TDP1-214ENST00000556063 CDKN3Q16667 212 aa7.62□□□□□ -1.19
TDP1-214ENST00000556063 DUOXA1Q1HG43 343 aa7.62□□□□□ -1.19
TDP1-214ENST00000556063 ANKRD22Q5VYY1 191 aa7.62□□□□□ -1.19
TDP1-214ENST00000556063 PDPK2PQ6A1A2 396 aa7.62□□□□□ -1.19
TDP1-214ENST00000556063 HIBCHQ6NVY1 386 aaPredicted RBP7.62□□□□□ -1.19
TDP1-214ENST00000556063 CENPUQ71F23 418 aa7.62□□□□□ -1.19
TDP1-214ENST00000556063 HSD11B1LQ7Z5J1 315 aa7.62□□□□□ -1.19
TDP1-214ENST00000556063 TECPR1Q7Z6L1 1165 aa7.62□□□□□ -1.19
TDP1-214ENST00000556063 IQCHQ86VS3 1027 aa7.62□□□□□ -1.19
TDP1-214ENST00000556063 DCP2Q8IU60 420 aaKnown RBP7.62□□□□□ -1.19
TDP1-214ENST00000556063 CCNJLQ8IV13 435 aa7.62□□□□□ -1.19
TDP1-214ENST00000556063 IFT20Q8IY31 132 aa7.62□□□□□ -1.19
TDP1-214ENST00000556063 TTC30BQ8N4P2 665 aa7.62□□□□□ -1.19
TDP1-214ENST00000556063 MFSD2AQ8NA29 543 aa7.62□□□□□ -1.19
TDP1-214ENST00000556063 NOA1Q8NC60 698 aaKnown RBP7.62□□□□□ -1.19
TDP1-214ENST00000556063 DTX3LQ8TDB6 740 aa7.62□□□□□ -1.19
TDP1-214ENST00000556063 LRRC39Q96DD0 335 aa7.62□□□□□ -1.19
TDP1-214ENST00000556063 KLHDC7BQ96G42 594 aa7.62□□□□□ -1.19
TDP1-214ENST00000556063 MS4A3Q96HJ5 214 aa7.62□□□□□ -1.19
TDP1-214ENST00000556063 COQ10AQ96MF6 247 aa7.62□□□□□ -1.19
TDP1-214ENST00000556063 SERPINB12Q96P63 405 aa7.62□□□□□ -1.19
TDP1-214ENST00000556063 PLEKHG4BQ96PX9 1271 aa7.62□□□□□ -1.19
TDP1-214ENST00000556063 SMIM14Q96QK8 99 aa7.62□□□□□ -1.19
TDP1-214ENST00000556063 ZSCAN5AQ9BUG6 496 aa7.62□□□□□ -1.19
TDP1-214ENST00000556063 TSPYL1Q9H0U9 437 aa7.62□□□□□ -1.19
TDP1-214ENST00000556063 PHPT1Q9NRX4 125 aaPredicted RBP7.62□□□□□ -1.19
TDP1-214ENST00000556063 IL17CQ9P0M4 197 aa7.62□□□□□ -1.19
TDP1-214ENST00000556063 NCDNQ9UBB6 729 aa7.62□□□□□ -1.19
TDP1-214ENST00000556063 NFKBIL1Q9UBC1 381 aaPredicted RBP7.62□□□□□ -1.19
TDP1-214ENST00000556063 MTRF1LQ9UGC7 380 aaKnown RBP7.62□□□□□ -1.19
TDP1-214ENST00000556063 RIMKLBQ9ULI2 386 aa7.62□□□□□ -1.19
TDP1-214ENST00000556063 COQ6Q9Y2Z9 468 aa7.62□□□□□ -1.19
TDP1-214ENST00000556063 OTOGLQ3ZCN5 2332 aa7.62□□□□□ -1.19
TDP1-214ENST00000556063 GLYATL1P3A0A0U1RQE8 302 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms