RNA–Protein interactions for RNA: ENST00000555576.5

TUBB3-208, Transcript of tubulin beta 3 class III, humanhuman

TSL 4 BASIC

Gene TUBB3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-208ENST00000555576 CLCA4Q14CN2 919 aa13.25□□□□□ -0.29
TUBB3-208ENST00000555576 PTPRRQ15256 657 aa13.25□□□□□ -0.29
TUBB3-208ENST00000555576 E4F1Q66K89 784 aaPredicted RBP13.25□□□□□ -0.29
TUBB3-208ENST00000555576 PIM3Q86V86 326 aa13.25□□□□□ -0.29
TUBB3-208ENST00000555576 NAGSQ8N159 534 aa13.25□□□□□ -0.29
TUBB3-208ENST00000555576 SCARF2Q96GP6 870 aaPredicted RBP13.25□□□□□ -0.29
TUBB3-208ENST00000555576 CCDC74BQ96LY2 380 aa13.25□□□□□ -0.29
TUBB3-208ENST00000555576 PCMTD1Q96MG8 357 aaPredicted RBP13.25□□□□□ -0.29
TUBB3-208ENST00000555576 ZNF599Q96NL3 588 aa13.25□□□□□ -0.29
TUBB3-208ENST00000555576 MCCC1Q96RQ3 725 aaPredicted RBP13.25□□□□□ -0.29
TUBB3-208ENST00000555576 NUDCD1Q96RS6 583 aa13.25□□□□□ -0.29
TUBB3-208ENST00000555576 SLC12A9Q9BXP2 914 aa13.25□□□□□ -0.29
TUBB3-208ENST00000555576 GSDMCQ9BYG8 508 aa13.25□□□□□ -0.29
TUBB3-208ENST00000555576 FAM117AQ9C073 453 aa13.25□□□□□ -0.29
TUBB3-208ENST00000555576 WDR70Q9NW82 654 aa13.25□□□□□ -0.29
TUBB3-208ENST00000555576 IL17BQ9UHF5 180 aa13.25□□□□□ -0.29
TUBB3-208ENST00000555576 PCDHGC4Q9Y5F7 938 aa13.25□□□□□ -0.29
TUBB3-208ENST00000555576 PCDHGA3Q9Y5H0 932 aa13.25□□□□□ -0.29
TUBB3-208ENST00000555576 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.24□□□□□ -0.29
TUBB3-208ENST00000555576 STMND1H3BQB6 276 aa13.24□□□□□ -0.29
TUBB3-208ENST00000555576 PSMD11O00231 422 aa13.24□□□□□ -0.29
TUBB3-208ENST00000555576 PPM1DO15297 605 aa13.24□□□□□ -0.29
TUBB3-208ENST00000555576 MAFKO60675 156 aa13.24□□□□□ -0.29
TUBB3-208ENST00000555576 IVLP07476 585 aa13.24□□□□□ -0.29
TUBB3-208ENST00000555576 THRAP10827 490 aa13.24□□□□□ -0.29
TUBB3-208ENST00000555576 DESP17661 470 aa13.24□□□□□ -0.29
TUBB3-208ENST00000555576 IL1R2P27930 398 aa13.24□□□□□ -0.29
TUBB3-208ENST00000555576 GPR3P46089 330 aa13.24□□□□□ -0.29
TUBB3-208ENST00000555576 GNPDA1P46926 289 aa13.24□□□□□ -0.29
TUBB3-208ENST00000555576 RENBPP51606 427 aa13.24□□□□□ -0.29
TUBB3-208ENST00000555576 ZNF135P52742 658 aaPredicted RBP13.24□□□□□ -0.29
TUBB3-208ENST00000555576 LIMK2P53671 638 aa13.24□□□□□ -0.29
TUBB3-208ENST00000555576 ILF3Q12906 894 aaKnown RBP eCLIP13.24□□□□□ -0.29
TUBB3-208ENST00000555576 SQSTM1Q13501 440 aa13.24□□□□□ -0.29
TUBB3-208ENST00000555576 DPYSL2Q16555 572 aa13.24□□□□□ -0.29
TUBB3-208ENST00000555576 AMZ1Q400G9 498 aa13.24□□□□□ -0.29
TUBB3-208ENST00000555576 PPP6R3Q5H9R7 873 aaPredicted RBP13.24□□□□□ -0.29
TUBB3-208ENST00000555576 TECPR1Q7Z6L1 1165 aa13.24□□□□□ -0.29
TUBB3-208ENST00000555576 TSPAN33Q86UF1 283 aa13.24□□□□□ -0.29
TUBB3-208ENST00000555576 NKD1Q969G9 470 aa13.24□□□□□ -0.29
TUBB3-208ENST00000555576 NOD2Q9HC29 1040 aa13.24□□□□□ -0.29
TUBB3-208ENST00000555576 PHPT1Q9NRX4 125 aaPredicted RBP13.24□□□□□ -0.29
TUBB3-208ENST00000555576 ETNK2Q9NVF9 386 aa13.24□□□□□ -0.29
TUBB3-208ENST00000555576 MOSPD1Q9UJG1 213 aa13.24□□□□□ -0.29
TUBB3-208ENST00000555576 PPIL1Q9Y3C6 166 aa13.24□□□□□ -0.29
TUBB3-208ENST00000555576 HEMK1Q9Y5R4 338 aaPredicted RBP13.24□□□□□ -0.29
TUBB3-208ENST00000555576 LRRK2Q5S007 2527 aa13.24□□□□□ -0.29
TUBB3-208ENST00000555576 ZFC3H1O60293 1989 aaKnown RBP13.23□□□□□ -0.29
TUBB3-208ENST00000555576 A0A1W2PQ67 120 aa13.23□□□□□ -0.29
TUBB3-208ENST00000555576 RHPN2P1A8MT19 583 aa13.23□□□□□ -0.29
TUBB3-208ENST00000555576 TMCO5BA8MYB1 307 aa13.23□□□□□ -0.29
TUBB3-208ENST00000555576 DAPK3O43293 454 aa13.23□□□□□ -0.29
TUBB3-208ENST00000555576 CPP00450 1065 aa13.23□□□□□ -0.29
TUBB3-208ENST00000555576 TCF4P15884 667 aa13.23□□□□□ -0.29
TUBB3-208ENST00000555576 TNFAIP3P21580 790 aa13.23□□□□□ -0.29
TUBB3-208ENST00000555576 ALDH4A1P30038 563 aa13.23□□□□□ -0.29
TUBB3-208ENST00000555576 HSPA9P38646 679 aaKnown RBP13.23□□□□□ -0.29
TUBB3-208ENST00000555576 POLD2P49005 469 aa13.23□□□□□ -0.29
TUBB3-208ENST00000555576 CTBSQ01459 385 aa13.23□□□□□ -0.29
TUBB3-208ENST00000555576 DPTQ07507 201 aa13.23□□□□□ -0.29
TUBB3-208ENST00000555576 PPP1R2P3Q6NXS1 205 aa13.23□□□□□ -0.29
TUBB3-208ENST00000555576 SLC30A9Q6PML9 568 aa13.23□□□□□ -0.29
TUBB3-208ENST00000555576 ATG14Q6ZNE5 492 aa13.23□□□□□ -0.29
TUBB3-208ENST00000555576 RFLNAQ6ZTI6 216 aa13.23□□□□□ -0.29
TUBB3-208ENST00000555576 Q6ZVL8 140 aa13.23□□□□□ -0.29
TUBB3-208ENST00000555576 LZTR1Q8N653 840 aa13.23□□□□□ -0.29
TUBB3-208ENST00000555576 OR4D9Q8NGE8 314 aa13.23□□□□□ -0.29
TUBB3-208ENST00000555576 SCRN2Q96FV2 425 aa13.23□□□□□ -0.29
TUBB3-208ENST00000555576 ARHGAP9Q9BRR9 750 aa13.23□□□□□ -0.29
TUBB3-208ENST00000555576 GEMIN8Q9NWZ8 242 aaKnown RBP13.23□□□□□ -0.29
TUBB3-208ENST00000555576 KCTD5Q9NXV2 234 aa13.23□□□□□ -0.29
TUBB3-208ENST00000555576 TMEM9Q9P0T7 183 aa13.23□□□□□ -0.29
TUBB3-208ENST00000555576 MYO6Q9UM54 1294 aa13.23□□□□□ -0.29
TUBB3-208ENST00000555576 PCDHB11Q9Y5F2 797 aa13.23□□□□□ -0.29
TUBB3-208ENST00000555576 IGHV1OR21-1A0A087WYE8 117 aa13.22□□□□□ -0.29
TUBB3-208ENST00000555576 A0A0U1RQS6 177 aa13.22□□□□□ -0.29
TUBB3-208ENST00000555576 DDX3XO00571 662 aaKnown RBP eCLIP13.22□□□□□ -0.292e-8■■□□□ 13.3
TUBB3-208ENST00000555576 PRPSAP2O60256 369 aa13.22□□□□□ -0.29
TUBB3-208ENST00000555576 FZD6O60353 706 aa13.22□□□□□ -0.29
TUBB3-208ENST00000555576 PGLSO95336 258 aa13.22□□□□□ -0.29
TUBB3-208ENST00000555576 CCDC172P0C7W6 258 aa13.22□□□□□ -0.29
TUBB3-208ENST00000555576 SFTPCP11686 197 aa13.22□□□□□ -0.29
TUBB3-208ENST00000555576 PCK1P35558 622 aa13.22□□□□□ -0.29
TUBB3-208ENST00000555576 ADCY8P40145 1251 aa13.22□□□□□ -0.29
TUBB3-208ENST00000555576 MAXP61244 160 aa13.22□□□□□ -0.29
TUBB3-208ENST00000555576 TRA2AQ13595 282 aaKnown RBP eCLIP13.22□□□□□ -0.29
TUBB3-208ENST00000555576 ZNF235Q14590 738 aa13.22□□□□□ -0.29
TUBB3-208ENST00000555576 IHHQ14623 411 aa13.22□□□□□ -0.29
TUBB3-208ENST00000555576 TMEM164Q5U3C3 297 aa13.22□□□□□ -0.29
TUBB3-208ENST00000555576 NKAIN2Q5VXU1 208 aa13.22□□□□□ -0.29
TUBB3-208ENST00000555576 RAET1GQ6H3X3 334 aa13.22□□□□□ -0.29
TUBB3-208ENST00000555576 ZNF571Q7Z3V5 609 aaPredicted RBP13.22□□□□□ -0.29
TUBB3-208ENST00000555576 POLNQ7Z5Q5 900 aa13.22□□□□□ -0.29
TUBB3-208ENST00000555576 BMPERQ8N8U9 685 aa13.22□□□□□ -0.29
TUBB3-208ENST00000555576 ZSCAN1Q8NBB4 408 aa13.22□□□□□ -0.29
TUBB3-208ENST00000555576 PDCD6IPQ8WUM4 868 aaKnown RBP13.22□□□□□ -0.29
TUBB3-208ENST00000555576 PIH1D2Q8WWB5 315 aa13.22□□□□□ -0.29
TUBB3-208ENST00000555576 JPH3Q8WXH2 748 aaPredicted RBP13.22□□□□□ -0.29
TUBB3-208ENST00000555576 CSPG4P5Q96PW8 444 aa13.22□□□□□ -0.29
TUBB3-208ENST00000555576 TAAR9Q96RI9 348 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms