RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 SFTPA2Q8IWL1 248 aa5.47□□□□□ -1.53
VRK1-205ENST00000555402 SCCPDHQ8NBX0 429 aa5.47□□□□□ -1.53
VRK1-205ENST00000555402 OR14L1PQ8NHC6 308 aa5.47□□□□□ -1.53
VRK1-205ENST00000555402 BICD2Q8TD16 824 aa5.47□□□□□ -1.53
VRK1-205ENST00000555402 MSI2Q96DH6 328 aaKnown RBP5.47□□□□□ -1.53
VRK1-205ENST00000555402 THOC3Q96J01 351 aaKnown RBP5.47□□□□□ -1.53
VRK1-205ENST00000555402 PLK3Q9H4B4 646 aa5.47□□□□□ -1.53
VRK1-205ENST00000555402 FZD3Q9NPG1 666 aa5.47□□□□□ -1.53
VRK1-205ENST00000555402 GPR108Q9NPR9 543 aa5.47□□□□□ -1.53
VRK1-205ENST00000555402 SETD4Q9NVD3 440 aa5.47□□□□□ -1.53
VRK1-205ENST00000555402 MDFICQ9P1T7 246 aa5.47□□□□□ -1.53
VRK1-205ENST00000555402 SQORQ9Y6N5 450 aa5.47□□□□□ -1.53
VRK1-205ENST00000555402 NOTCH4Q99466 2003 aa5.47□□□□□ -1.53
VRK1-205ENST00000555402 TMEM272A0A1B0GTI8 110 aa5.46□□□□□ -1.54
VRK1-205ENST00000555402 GAGE12JA6NER3 117 aa5.46□□□□□ -1.54
VRK1-205ENST00000555402 ATG13O75143 517 aa5.46□□□□□ -1.54
VRK1-205ENST00000555402 CNOT3O75175 753 aaKnown RBP5.46□□□□□ -1.54
VRK1-205ENST00000555402 ENTPD3O75355 529 aa5.46□□□□□ -1.54
VRK1-205ENST00000555402 GPC4O75487 556 aa5.46□□□□□ -1.54
VRK1-205ENST00000555402 NDUFB8O95169 186 aa5.46□□□□□ -1.54
VRK1-205ENST00000555402 NRIP1P48552 1158 aa5.46□□□□□ -1.54
VRK1-205ENST00000555402 LMAN1P49257 510 aa5.46□□□□□ -1.54
VRK1-205ENST00000555402 ALDH7A1P49419 539 aaKnown RBP5.46□□□□□ -1.54
VRK1-205ENST00000555402 RRP1P56182 461 aaKnown RBP5.46□□□□□ -1.54
VRK1-205ENST00000555402 ADIPOQQ15848 244 aa5.46□□□□□ -1.54
VRK1-205ENST00000555402 NTRK2Q16620 822 aa5.46□□□□□ -1.54
VRK1-205ENST00000555402 TMEM266Q2M3C6 531 aa5.46□□□□□ -1.54
VRK1-205ENST00000555402 Q5PR19 223 aa5.46□□□□□ -1.54
VRK1-205ENST00000555402 MANEAQ5SRI9 462 aa5.46□□□□□ -1.54
VRK1-205ENST00000555402 ASPHD1Q5U4P2 390 aa5.46□□□□□ -1.54
VRK1-205ENST00000555402 NUGGCQ68CJ6 796 aa5.46□□□□□ -1.54
VRK1-205ENST00000555402 C18orf65Q6ZTR6 163 aa5.46□□□□□ -1.54
VRK1-205ENST00000555402 LINGO2Q7L985 606 aa5.46□□□□□ -1.54
VRK1-205ENST00000555402 PRPF39Q86UA1 669 aaKnown RBP5.46□□□□□ -1.54
VRK1-205ENST00000555402 TEX45Q8NA69 505 aa5.46□□□□□ -1.54
VRK1-205ENST00000555402 ENGASEQ8NFI3 743 aa5.46□□□□□ -1.54
VRK1-205ENST00000555402 GPT2Q8TD30 523 aa5.46□□□□□ -1.54
VRK1-205ENST00000555402 CCDC34Q96HJ3 373 aa5.46□□□□□ -1.54
VRK1-205ENST00000555402 SLC41A2Q96JW4 573 aa5.46□□□□□ -1.54
VRK1-205ENST00000555402 FAM110AQ9BQ89 295 aa5.46□□□□□ -1.54
VRK1-205ENST00000555402 DDX4Q9NQI0 724 aaKnown RBP5.46□□□□□ -1.54
VRK1-205ENST00000555402 PCDHA12Q9UN75 941 aa5.46□□□□□ -1.54
VRK1-205ENST00000555402 NFE2L3Q9Y4A8 694 aa5.46□□□□□ -1.54
VRK1-205ENST00000555402 PASKQ96RG2 1323 aa5.46□□□□□ -1.54
VRK1-205ENST00000555402 C1orf226A1L170 272 aa5.45□□□□□ -1.54
VRK1-205ENST00000555402 TMEM202A6NGA9 273 aa5.45□□□□□ -1.54
VRK1-205ENST00000555402 CDRT15L2A8MXV6 281 aa5.45□□□□□ -1.54
VRK1-205ENST00000555402 KDM4EB2RXH2 506 aaPredicted RBP5.45□□□□□ -1.54
VRK1-205ENST00000555402 NDUFB4O95168 129 aa5.45□□□□□ -1.54
VRK1-205ENST00000555402 IFNA2P01563 188 aa5.45□□□□□ -1.54
VRK1-205ENST00000555402 NR2F1P10589 423 aa5.45□□□□□ -1.54
VRK1-205ENST00000555402 PSG1P11464 419 aa5.45□□□□□ -1.54
VRK1-205ENST00000555402 PMS2P54278 862 aa5.45□□□□□ -1.54
VRK1-205ENST00000555402 NEDD9Q14511 834 aa5.45□□□□□ -1.54
VRK1-205ENST00000555402 KRT24Q2M2I5 525 aa5.45□□□□□ -1.54
VRK1-205ENST00000555402 C2orf68Q2NKX9 166 aa5.45□□□□□ -1.54
VRK1-205ENST00000555402 WASHC2DQ5SRD0 308 aa5.45□□□□□ -1.54
VRK1-205ENST00000555402 NAA16Q6N069 864 aaPredicted RBP5.45□□□□□ -1.54
VRK1-205ENST00000555402 PARM1Q6UWI2 310 aa5.45□□□□□ -1.54
VRK1-205ENST00000555402 CLEC17AQ6ZS10 378 aa5.45□□□□□ -1.54
VRK1-205ENST00000555402 SEPT14Q6ZU15 432 aa5.45□□□□□ -1.54
VRK1-205ENST00000555402 PATL1Q86TB9 770 aaKnown RBP5.45□□□□□ -1.54
VRK1-205ENST00000555402 WDR63Q8IWG1 891 aa5.45□□□□□ -1.54
VRK1-205ENST00000555402 SCML4Q8N228 414 aa5.45□□□□□ -1.54
VRK1-205ENST00000555402 TMEM199Q8N511 208 aa5.45□□□□□ -1.54
VRK1-205ENST00000555402 APPL2Q8NEU8 664 aa5.45□□□□□ -1.54
VRK1-205ENST00000555402 LPAR1Q92633 364 aa5.45□□□□□ -1.54
VRK1-205ENST00000555402 ERGIC1Q969X5 290 aa5.45□□□□□ -1.54
VRK1-205ENST00000555402 RRNAD1Q96FB5 475 aaKnown RBP5.45□□□□□ -1.54
VRK1-205ENST00000555402 TXLNGYQ9BZA5 131 aa5.45□□□□□ -1.54
VRK1-205ENST00000555402 ISCUQ9H1K1 167 aa5.45□□□□□ -1.54
VRK1-205ENST00000555402 NDST4Q9H3R1 872 aa5.45□□□□□ -1.54
VRK1-205ENST00000555402 GIMAP4Q9NUV9 329 aa5.45□□□□□ -1.54
VRK1-205ENST00000555402 CPSF2Q9P2I0 782 aaKnown RBP5.45□□□□□ -1.54
VRK1-205ENST00000555402 NFKBIL1Q9UBC1 381 aaPredicted RBP5.45□□□□□ -1.54
VRK1-205ENST00000555402 HEY2Q9UBP5 337 aa5.45□□□□□ -1.54
VRK1-205ENST00000555402 RCOR1Q9UKL0 485 aa5.45□□□□□ -1.54
VRK1-205ENST00000555402 PTRH2Q9Y3E5 179 aaKnown RBP5.45□□□□□ -1.54
VRK1-205ENST00000555402 SRPRBQ9Y5M8 271 aaKnown RBP5.45□□□□□ -1.54
VRK1-205ENST00000555402 MAGED1Q9Y5V3 778 aaPredicted RBP5.45□□□□□ -1.54
VRK1-205ENST00000555402 SH2B2O14492 632 aaPredicted RBP5.44□□□□□ -1.54
VRK1-205ENST00000555402 ADRB2P07550 413 aa5.44□□□□□ -1.54
VRK1-205ENST00000555402 SELLP14151 372 aa5.44□□□□□ -1.54
VRK1-205ENST00000555402 CD58P19256 250 aa5.44□□□□□ -1.54
VRK1-205ENST00000555402 CHATP28329 748 aa5.44□□□□□ -1.54
VRK1-205ENST00000555402 P2RX3P56373 397 aa5.44□□□□□ -1.54
VRK1-205ENST00000555402 ZBED6P86452 979 aa5.44□□□□□ -1.54
VRK1-205ENST00000555402 RASA2Q15283 850 aa5.44□□□□□ -1.54
VRK1-205ENST00000555402 DUSP6Q16828 381 aa5.44□□□□□ -1.54
VRK1-205ENST00000555402 CDONQ4KMG0 1287 aa5.44□□□□□ -1.54
VRK1-205ENST00000555402 MON1BQ7L1V2 547 aa5.44□□□□□ -1.54
VRK1-205ENST00000555402 KRT74Q7RTS7 529 aa5.44□□□□□ -1.54
VRK1-205ENST00000555402 RNF168Q8IYW5 571 aaPredicted RBP5.44□□□□□ -1.54
VRK1-205ENST00000555402 TMTC2Q8N394 836 aa5.44□□□□□ -1.54
VRK1-205ENST00000555402 CCDC191Q8NCU4 936 aa5.44□□□□□ -1.54
VRK1-205ENST00000555402 IGSF8Q969P0 613 aa5.44□□□□□ -1.54
VRK1-205ENST00000555402 MOAP1Q96BY2 351 aa5.44□□□□□ -1.54
VRK1-205ENST00000555402 OR2A14Q96R47 310 aa5.44□□□□□ -1.54
VRK1-205ENST00000555402 PCGF1Q9BSM1 259 aa5.44□□□□□ -1.54
VRK1-205ENST00000555402 MSTO1Q9BUK6 570 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms