RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 SSU72Q9NP77 194 aaKnown RBP9.91□□□□□ -0.82
PSEN1-213ENST00000555386 CHKBQ9Y259 395 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 PCDHB9Q9Y5E1 797 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 RAI2Q9Y5P3 530 aa9.91□□□□□ -0.82
PSEN1-213ENST00000555386 PLXNA2O75051 1894 aa9.9□□□□□ -0.82
PSEN1-213ENST00000555386 TDRD6O60522 2096 aaKnown RBP9.9□□□□□ -0.82
PSEN1-213ENST00000555386 OTOGLQ3ZCN5 2332 aa9.9□□□□□ -0.82
PSEN1-213ENST00000555386 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.9□□□□□ -0.83
PSEN1-213ENST00000555386 CFAP69A5D8W1 941 aa9.9□□□□□ -0.83
PSEN1-213ENST00000555386 LRRC72A6NJI9 287 aa9.9□□□□□ -0.83
PSEN1-213ENST00000555386 CCT8L1PA6NM43 557 aa9.9□□□□□ -0.83
PSEN1-213ENST00000555386 PRPF4O43172 522 aaKnown RBP eCLIP9.9□□□□□ -0.83
PSEN1-213ENST00000555386 RNGTTO60942 597 aaKnown RBP9.9□□□□□ -0.83
PSEN1-213ENST00000555386 PMPCBO75439 489 aa9.9□□□□□ -0.83
PSEN1-213ENST00000555386 STK10O94804 968 aaKnown RBP9.9□□□□□ -0.83
PSEN1-213ENST00000555386 MT-CYBP00156 380 aaPredicted RBP9.9□□□□□ -0.83
PSEN1-213ENST00000555386 IFNB1P01574 187 aa9.9□□□□□ -0.83
PSEN1-213ENST00000555386 LMNAP02545 664 aaKnown RBP9.9□□□□□ -0.83
PSEN1-213ENST00000555386 VIMP08670 466 aaKnown RBP9.9□□□□□ -0.83
PSEN1-213ENST00000555386 SERPINF2P08697 491 aa9.9□□□□□ -0.83
PSEN1-213ENST00000555386 TIMP2P16035 220 aa9.9□□□□□ -0.83
PSEN1-213ENST00000555386 CTPS1P17812 591 aa9.9□□□□□ -0.83
PSEN1-213ENST00000555386 NFKB1P19838 968 aa9.9□□□□□ -0.83
PSEN1-213ENST00000555386 CR2P20023 1033 aa9.9□□□□□ -0.83
PSEN1-213ENST00000555386 NBL1P41271 181 aa9.9□□□□□ -0.83
PSEN1-213ENST00000555386 MAPK8P45983 427 aa9.9□□□□□ -0.83
PSEN1-213ENST00000555386 CSNK1DP48730 415 aa9.9□□□□□ -0.83
PSEN1-213ENST00000555386 EPHB1P54762 984 aa9.9□□□□□ -0.83
PSEN1-213ENST00000555386 TAS2R38P59533 333 aa9.9□□□□□ -0.83
PSEN1-213ENST00000555386 PPP2CBP62714 309 aa9.9□□□□□ -0.83
PSEN1-213ENST00000555386 PPP2CAP67775 309 aa9.9□□□□□ -0.83
PSEN1-213ENST00000555386 ZNF33AQ06730 810 aa9.9□□□□□ -0.83
PSEN1-213ENST00000555386 WASHC5Q12768 1159 aa9.9□□□□□ -0.83
PSEN1-213ENST00000555386 XRCC4Q13426 336 aa9.9□□□□□ -0.83
PSEN1-213ENST00000555386 GRM3Q14832 879 aa9.9□□□□□ -0.83
PSEN1-213ENST00000555386 PTPRRQ15256 657 aa9.9□□□□□ -0.83
PSEN1-213ENST00000555386 CCDC38Q502W7 563 aa9.9□□□□□ -0.83
PSEN1-213ENST00000555386 TEX44Q53QW1 395 aa9.9□□□□□ -0.83
PSEN1-213ENST00000555386 SYCP2LQ5T4T6 812 aa9.9□□□□□ -0.83
PSEN1-213ENST00000555386 LYSMD4Q5XG99 296 aa9.9□□□□□ -0.83
PSEN1-213ENST00000555386 PMS2CLQ68D20 193 aa9.9□□□□□ -0.83
PSEN1-213ENST00000555386 CYP2U1Q7Z449 544 aa9.9□□□□□ -0.83
PSEN1-213ENST00000555386 PRUNE1Q86TP1 453 aa9.9□□□□□ -0.83
PSEN1-213ENST00000555386 TRABD2AQ86V40 505 aa9.9□□□□□ -0.83
PSEN1-213ENST00000555386 NAT8LQ8N9F0 302 aa9.9□□□□□ -0.83
PSEN1-213ENST00000555386 GRAMD1AQ96CP6 724 aa9.9□□□□□ -0.83
PSEN1-213ENST00000555386 LRIG1Q96JA1 1093 aa9.9□□□□□ -0.83
PSEN1-213ENST00000555386 MAGEB18Q96M61 343 aa9.9□□□□□ -0.83
PSEN1-213ENST00000555386 PWWP2AQ96N64 755 aa9.9□□□□□ -0.83
PSEN1-213ENST00000555386 ZNF641Q96N77 438 aaPredicted RBP9.9□□□□□ -0.83
PSEN1-213ENST00000555386 SMIM14Q96QK8 99 aa9.9□□□□□ -0.83
PSEN1-213ENST00000555386 TUBGCP5Q96RT8 1024 aa9.9□□□□□ -0.83
PSEN1-213ENST00000555386 HDAC8Q9BY41 377 aa9.9□□□□□ -0.83
PSEN1-213ENST00000555386 CPEB1Q9BZB8 566 aaKnown RBP9.9□□□□□ -0.83
PSEN1-213ENST00000555386 ARRDC1-AS1Q9H2J1 176 aa9.9□□□□□ -0.83
PSEN1-213ENST00000555386 GLOD4Q9HC38 313 aa9.9□□□□□ -0.83
PSEN1-213ENST00000555386 PCDH12Q9NPG4 1184 aa9.9□□□□□ -0.83
PSEN1-213ENST00000555386 NCDNQ9UBB6 729 aa9.9□□□□□ -0.83
PSEN1-213ENST00000555386 EIF2B4Q9UI10 523 aaKnown RBP9.9□□□□□ -0.83
PSEN1-213ENST00000555386 FZD4Q9ULV1 537 aa9.9□□□□□ -0.83
PSEN1-213ENST00000555386 CAPN7Q9Y6W3 813 aa9.9□□□□□ -0.83
PSEN1-213ENST00000555386 TNRC6BQ9UPQ9 1833 aaKnown RBP9.89□□□□□ -0.83
PSEN1-213ENST00000555386 A0A0U1RQS6 177 aa9.89□□□□□ -0.83
PSEN1-213ENST00000555386 A0A1W2PQU0 124 aa9.89□□□□□ -0.83
PSEN1-213ENST00000555386 UPK3BL1B0FP48 263 aa9.89□□□□□ -0.83
PSEN1-213ENST00000555386 UPK3BL2E5RIL1 263 aa9.89□□□□□ -0.83
PSEN1-213ENST00000555386 H0YHG0 523 aa9.89□□□□□ -0.83
PSEN1-213ENST00000555386 MTSS1O43312 755 aa9.89□□□□□ -0.83
PSEN1-213ENST00000555386 PLRG1O43660 514 aaKnown RBP9.89□□□□□ -0.83
PSEN1-213ENST00000555386 SNX3O60493 162 aa9.89□□□□□ -0.83
PSEN1-213ENST00000555386 IGLV3-19P01714 112 aa9.89□□□□□ -0.83
PSEN1-213ENST00000555386 PDHA1P08559 390 aa9.89□□□□□ -0.83
PSEN1-213ENST00000555386 ZSCAN5DPP0CG00 497 aa9.89□□□□□ -0.83
PSEN1-213ENST00000555386 ETS1P14921 441 aa9.89□□□□□ -0.83
PSEN1-213ENST00000555386 STX2P32856 288 aa9.89□□□□□ -0.83
PSEN1-213ENST00000555386 CD68P34810 354 aaPredicted RBP9.89□□□□□ -0.83
PSEN1-213ENST00000555386 RPL22P35268 128 aaKnown RBP9.89□□□□□ -0.83
PSEN1-213ENST00000555386 GDF10P55107 478 aa9.89□□□□□ -0.83
PSEN1-213ENST00000555386 IL9RQ01113 521 aa9.89□□□□□ -0.83
PSEN1-213ENST00000555386 CCDC15Q0P6D6 951 aa9.89□□□□□ -0.83
PSEN1-213ENST00000555386 PDIA2Q13087 525 aaKnown RBP9.89□□□□□ -0.83
PSEN1-213ENST00000555386 GALNT3Q14435 633 aa9.89□□□□□ -0.83
PSEN1-213ENST00000555386 IHHQ14623 411 aa9.89□□□□□ -0.83
PSEN1-213ENST00000555386 KLHL38Q2WGJ6 581 aa9.89□□□□□ -0.83
PSEN1-213ENST00000555386 ARMC12Q5T9G4 340 aa9.89□□□□□ -0.83
PSEN1-213ENST00000555386 FAXCQ5TGI0 409 aa9.89□□□□□ -0.83
PSEN1-213ENST00000555386 SEL1L3Q68CR1 1132 aa9.89□□□□□ -0.83
PSEN1-213ENST00000555386 KIAA0895LQ68EN5 471 aa9.89□□□□□ -0.83
PSEN1-213ENST00000555386 C4orf22Q6V702 233 aa9.89□□□□□ -0.83
PSEN1-213ENST00000555386 C11orf74Q86VG3 221 aa9.89□□□□□ -0.83
PSEN1-213ENST00000555386 ZBED8Q8IZ13 594 aa9.89□□□□□ -0.83
PSEN1-213ENST00000555386 DCLK2Q8N568 766 aa9.89□□□□□ -0.83
PSEN1-213ENST00000555386 GBP7Q8N8V2 638 aaPredicted RBP9.89□□□□□ -0.83
PSEN1-213ENST00000555386 LPCAT1Q8NF37 534 aa9.89□□□□□ -0.83
PSEN1-213ENST00000555386 OR2T34Q8NGX1 318 aa9.89□□□□□ -0.83
PSEN1-213ENST00000555386 ARRDC2Q8TBH0 407 aa9.89□□□□□ -0.83
PSEN1-213ENST00000555386 CPT1BQ92523 772 aa9.89□□□□□ -0.83
PSEN1-213ENST00000555386 FATE1Q969F0 183 aa9.89□□□□□ -0.83
PSEN1-213ENST00000555386 VOPP1Q96AW1 172 aa9.89□□□□□ -0.83
PSEN1-213ENST00000555386 BIRC7Q96CA5 298 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms