RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 SLC4A1P02730 911 aa12.34□□□□□ -0.43
SYNE2-214ENST00000554928 GIMD1P0DJR0 217 aa12.34□□□□□ -0.43
SYNE2-214ENST00000554928 MYF5P13349 255 aa12.34□□□□□ -0.43
SYNE2-214ENST00000554928 CSRP1P21291 193 aaKnown RBP12.34□□□□□ -0.43
SYNE2-214ENST00000554928 SDHBP21912 280 aa12.34□□□□□ -0.43
SYNE2-214ENST00000554928 SLC14A1Q13336 389 aa12.34□□□□□ -0.43
SYNE2-214ENST00000554928 MTM1Q13496 603 aa12.34□□□□□ -0.43
SYNE2-214ENST00000554928 ARHGEF7Q14155 803 aa12.34□□□□□ -0.43
SYNE2-214ENST00000554928 SLC14A2Q15849 920 aa12.34□□□□□ -0.43
SYNE2-214ENST00000554928 ALG11Q2TAA5 492 aa12.34□□□□□ -0.43
SYNE2-214ENST00000554928 SIRPB2Q5JXA9 342 aa12.34□□□□□ -0.43
SYNE2-214ENST00000554928 N4BP2L1Q5TBK1 243 aaPredicted RBP12.34□□□□□ -0.43
SYNE2-214ENST00000554928 ESRP1Q6NXG1 681 aaKnown RBP12.34□□□□□ -0.43
SYNE2-214ENST00000554928 PNCKQ6P2M8 343 aa12.34□□□□□ -0.43
SYNE2-214ENST00000554928 TTC13Q8NBP0 860 aa12.34□□□□□ -0.43
SYNE2-214ENST00000554928 RHBDD1Q8TEB9 315 aa12.34□□□□□ -0.43
SYNE2-214ENST00000554928 TSACCQ96A04 125 aaPredicted RBP12.34□□□□□ -0.43
SYNE2-214ENST00000554928 IFT43Q96FT9 208 aa12.34□□□□□ -0.43
SYNE2-214ENST00000554928 PDXPQ96GD0 296 aa12.34□□□□□ -0.43
SYNE2-214ENST00000554928 MS4A14Q96JA4 679 aa12.34□□□□□ -0.43
SYNE2-214ENST00000554928 FICDQ9BVA6 458 aa12.34□□□□□ -0.43
SYNE2-214ENST00000554928 C1QTNF7Q9BXJ2 289 aa12.34□□□□□ -0.43
SYNE2-214ENST00000554928 MRPL40Q9NQ50 206 aaKnown RBP12.34□□□□□ -0.43
SYNE2-214ENST00000554928 HAUS2Q9NVX0 235 aa12.34□□□□□ -0.43
SYNE2-214ENST00000554928 ZNF711Q9Y462 761 aa12.34□□□□□ -0.43
SYNE2-214ENST00000554928 PCDHGB2Q9Y5G2 931 aa12.34□□□□□ -0.43
SYNE2-214ENST00000554928 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.34□□□□□ -0.43
SYNE2-214ENST00000554928 CNOT1A5YKK6 2376 aaKnown RBP12.34□□□□□ -0.43
SYNE2-214ENST00000554928 GOLGA6CA6NDK9 693 aa12.33□□□□□ -0.44
SYNE2-214ENST00000554928 GOLGA6BA6NDN3 693 aa12.33□□□□□ -0.44
SYNE2-214ENST00000554928 C5orf60A6NFR6 353 aa12.33□□□□□ -0.44
SYNE2-214ENST00000554928 PSMD11O00231 422 aa12.33□□□□□ -0.44
SYNE2-214ENST00000554928 TRIM38O00635 465 aa12.33□□□□□ -0.44
SYNE2-214ENST00000554928 FANCGO15287 622 aa12.33□□□□□ -0.44
SYNE2-214ENST00000554928 ZSCAN12O43309 604 aa12.33□□□□□ -0.44
SYNE2-214ENST00000554928 BUD23O43709 281 aaKnown RBP12.33□□□□□ -0.44
SYNE2-214ENST00000554928 MAGEC1O60732 1142 aa12.33□□□□□ -0.44
SYNE2-214ENST00000554928 USP12O75317 370 aa12.33□□□□□ -0.44
SYNE2-214ENST00000554928 PIAS2O75928 621 aa12.33□□□□□ -0.44
SYNE2-214ENST00000554928 TOP3BO95985 862 aaKnown RBP12.33□□□□□ -0.44
SYNE2-214ENST00000554928 FUCA1P04066 466 aa12.33□□□□□ -0.44
SYNE2-214ENST00000554928 ITGAVP06756 1048 aa12.33□□□□□ -0.44
SYNE2-214ENST00000554928 ZSCAN5DPP0CG00 497 aa12.33□□□□□ -0.44
SYNE2-214ENST00000554928 GOLGA6DP0CG33 693 aa12.33□□□□□ -0.44
SYNE2-214ENST00000554928 NME1P15531 152 aaKnown RBP12.33□□□□□ -0.44
SYNE2-214ENST00000554928 CA4P22748 312 aa12.33□□□□□ -0.44
SYNE2-214ENST00000554928 DGKAP23743 735 aa12.33□□□□□ -0.44
SYNE2-214ENST00000554928 ADRA1AP35348 466 aa12.33□□□□□ -0.44
SYNE2-214ENST00000554928 TRIM23P36406 574 aa12.33□□□□□ -0.44
SYNE2-214ENST00000554928 ARRB1P49407 418 aaPredicted RBP12.33□□□□□ -0.44
SYNE2-214ENST00000554928 C1orf61Q13536 156 aa12.33□□□□□ -0.44
SYNE2-214ENST00000554928 PTPRCAPQ14761 206 aa12.33□□□□□ -0.44
SYNE2-214ENST00000554928 NFATC4Q14934 902 aa12.33□□□□□ -0.44
SYNE2-214ENST00000554928 ENPP7Q6UWV6 458 aa12.33□□□□□ -0.44
SYNE2-214ENST00000554928 MACC1Q6ZN28 852 aa12.33□□□□□ -0.44
SYNE2-214ENST00000554928 TRIM74Q86UV6 250 aa12.33□□□□□ -0.44
SYNE2-214ENST00000554928 PARGQ86W56 976 aa12.33□□□□□ -0.44
SYNE2-214ENST00000554928 EID2Q8N6I1 236 aa12.33□□□□□ -0.44
SYNE2-214ENST00000554928 COG1Q8WTW3 980 aa12.33□□□□□ -0.44
SYNE2-214ENST00000554928 OR1E3Q8WZA6 343 aa12.33□□□□□ -0.44
SYNE2-214ENST00000554928 RIOK2Q9BVS4 552 aaKnown RBP12.33□□□□□ -0.44
SYNE2-214ENST00000554928 ADGRE3Q9BY15 652 aa12.33□□□□□ -0.44
SYNE2-214ENST00000554928 FGF22Q9HCT0 170 aa12.33□□□□□ -0.44
SYNE2-214ENST00000554928 GOLGA6AQ9NYA3 693 aa12.33□□□□□ -0.44
SYNE2-214ENST00000554928 FADS2P1A8MWK0 482 aa12.32□□□□□ -0.44
SYNE2-214ENST00000554928 FFAR2O15552 330 aa12.32□□□□□ -0.44
SYNE2-214ENST00000554928 FLRT2O43155 660 aa12.32□□□□□ -0.44
SYNE2-214ENST00000554928 GCATO75600 419 aa12.32□□□□□ -0.44
SYNE2-214ENST00000554928 CSF2P04141 144 aa12.32□□□□□ -0.44
SYNE2-214ENST00000554928 ZNF30P17039 623 aa12.32□□□□□ -0.44
SYNE2-214ENST00000554928 JUNDP17535 347 aa12.32□□□□□ -0.44
SYNE2-214ENST00000554928 CA5AP35218 305 aa12.32□□□□□ -0.44
SYNE2-214ENST00000554928 KCNJ1P48048 391 aa12.32□□□□□ -0.44
SYNE2-214ENST00000554928 POLD2P49005 469 aa12.32□□□□□ -0.44
SYNE2-214ENST00000554928 SPINT3P49223 89 aa12.32□□□□□ -0.44
SYNE2-214ENST00000554928 THOP1P52888 689 aa12.32□□□□□ -0.44
SYNE2-214ENST00000554928 YPEL5P62699 121 aa12.32□□□□□ -0.44
SYNE2-214ENST00000554928 CCDC173Q0VFZ6 552 aa12.32□□□□□ -0.44
SYNE2-214ENST00000554928 MPP3Q13368 585 aa12.32□□□□□ -0.44
SYNE2-214ENST00000554928 SLC1A5Q15758 541 aa12.32□□□□□ -0.44
SYNE2-214ENST00000554928 ALS2CLQ60I27 953 aa12.32□□□□□ -0.44
SYNE2-214ENST00000554928 ITPRIPL1Q6GPH6 555 aa12.32□□□□□ -0.44
SYNE2-214ENST00000554928 RAET1GQ6H3X3 334 aa12.32□□□□□ -0.44
SYNE2-214ENST00000554928 DENND5AQ6IQ26 1287 aa12.32□□□□□ -0.44
SYNE2-214ENST00000554928 RD3Q7Z3Z2 195 aa12.32□□□□□ -0.44
SYNE2-214ENST00000554928 TMC3Q7Z5M5 1100 aa12.32□□□□□ -0.44
SYNE2-214ENST00000554928 SLCO6A1Q86UG4 719 aa12.32□□□□□ -0.44
SYNE2-214ENST00000554928 HEATR4Q86WZ0 1026 aa12.32□□□□□ -0.44
SYNE2-214ENST00000554928 DCP2Q8IU60 420 aaKnown RBP12.32□□□□□ -0.44
SYNE2-214ENST00000554928 HID1Q8IV36 788 aa12.32□□□□□ -0.44
SYNE2-214ENST00000554928 KLHDC8BQ8IXV7 354 aa12.32□□□□□ -0.44
SYNE2-214ENST00000554928 PHACTR4Q8IZ21 702 aa12.32□□□□□ -0.44
SYNE2-214ENST00000554928 NDUFAF2Q8N183 169 aa12.32□□□□□ -0.44
SYNE2-214ENST00000554928 TTC30BQ8N4P2 665 aa12.32□□□□□ -0.44
SYNE2-214ENST00000554928 OXR1Q8N573 874 aa12.32□□□□□ -0.44
SYNE2-214ENST00000554928 GPR26Q8NDV2 337 aa12.32□□□□□ -0.44
SYNE2-214ENST00000554928 ZNF548Q8NEK5 533 aaPredicted RBP12.32□□□□□ -0.44
SYNE2-214ENST00000554928 FAM174AQ8TBP5 190 aa12.32□□□□□ -0.44
SYNE2-214ENST00000554928 AP2M1Q96CW1 435 aa12.32□□□□□ -0.44
SYNE2-214ENST00000554928 RTP4Q96DX8 246 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms