RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 GAGE13Q4V321 117 aa5.07□□□□□ -1.6
ATXN3-228ENST00000554592 TMEM119Q4V9L6 283 aa5.07□□□□□ -1.6
ATXN3-228ENST00000554592 MDH1BQ5I0G3 518 aa5.07□□□□□ -1.6
ATXN3-228ENST00000554592 HES3Q5TGS1 186 aa5.07□□□□□ -1.6
ATXN3-228ENST00000554592 PPP4R4Q6NUP7 873 aa5.07□□□□□ -1.6
ATXN3-228ENST00000554592 TPGS1Q6ZTW0 290 aa5.07□□□□□ -1.6
ATXN3-228ENST00000554592 USP49Q70CQ1 688 aa5.07□□□□□ -1.6
ATXN3-228ENST00000554592 ZNF720Q7Z2F6 126 aa5.07□□□□□ -1.6
ATXN3-228ENST00000554592 GPBP1Q86WP2 473 aa5.07□□□□□ -1.6
ATXN3-228ENST00000554592 BRSK2Q8IWQ3 736 aa5.07□□□□□ -1.6
ATXN3-228ENST00000554592 LSMEM2Q8N112 164 aa5.07□□□□□ -1.6
ATXN3-228ENST00000554592 C3orf20Q8ND61 904 aa5.07□□□□□ -1.6
ATXN3-228ENST00000554592 ZNF248Q8NDW4 579 aa5.07□□□□□ -1.6
ATXN3-228ENST00000554592 IFI44Q8TCB0 444 aa5.07□□□□□ -1.6
ATXN3-228ENST00000554592 KBTBD7Q8WVZ9 684 aa5.07□□□□□ -1.6
ATXN3-228ENST00000554592 SNX19Q92543 992 aa5.07□□□□□ -1.6
ATXN3-228ENST00000554592 EXTL1Q92935 676 aa5.07□□□□□ -1.6
ATXN3-228ENST00000554592 FBXO32Q969P5 355 aa5.07□□□□□ -1.6
ATXN3-228ENST00000554592 WBP2Q969T9 261 aa5.07□□□□□ -1.6
ATXN3-228ENST00000554592 TTC17Q96AE7 1141 aa5.07□□□□□ -1.6
ATXN3-228ENST00000554592 SKA1Q96BD8 255 aa5.07□□□□□ -1.6
ATXN3-228ENST00000554592 HVCN1Q96D96 273 aa5.07□□□□□ -1.6
ATXN3-228ENST00000554592 CYFIP2Q96F07 1278 aa5.07□□□□□ -1.6
ATXN3-228ENST00000554592 ZNF503Q96F45 646 aa5.07□□□□□ -1.6
ATXN3-228ENST00000554592 MED8Q96G25 268 aa5.07□□□□□ -1.6
ATXN3-228ENST00000554592 TMX3Q96JJ7 454 aa5.07□□□□□ -1.6
ATXN3-228ENST00000554592 CNDP2Q96KP4 475 aaKnown RBP5.07□□□□□ -1.6
ATXN3-228ENST00000554592 FIZ1Q96SL8 496 aa5.07□□□□□ -1.6
ATXN3-228ENST00000554592 VRK1Q99986 396 aaPredicted RBP5.07□□□□□ -1.6
ATXN3-228ENST00000554592 LLPHQ9BRT6 129 aaKnown RBP5.07□□□□□ -1.6
ATXN3-228ENST00000554592 FAM213AQ9BRX8 229 aa5.07□□□□□ -1.6
ATXN3-228ENST00000554592 ELOVL4Q9GZR5 314 aa5.07□□□□□ -1.6
ATXN3-228ENST00000554592 ENKD1Q9H0I2 346 aa5.07□□□□□ -1.6
ATXN3-228ENST00000554592 SNX25Q9H3E2 840 aa5.07□□□□□ -1.6
ATXN3-228ENST00000554592 TM9SF3Q9HD45 589 aa5.07□□□□□ -1.6
ATXN3-228ENST00000554592 LANCL2Q9NS86 450 aa5.07□□□□□ -1.6
ATXN3-228ENST00000554592 IL37Q9NZH6 218 aa5.07□□□□□ -1.6
ATXN3-228ENST00000554592 LSM7Q9UK45 103 aaKnown RBP5.07□□□□□ -1.6
ATXN3-228ENST00000554592 AJAP1Q9UKB5 411 aaPredicted RBP5.07□□□□□ -1.6
ATXN3-228ENST00000554592 EXOC7Q9UPT5 735 aa5.07□□□□□ -1.6
ATXN3-228ENST00000554592 SLC27A6Q9Y2P4 619 aa5.07□□□□□ -1.6
ATXN3-228ENST00000554592 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.07□□□□□ -1.6
ATXN3-228ENST00000554592 CELSR3Q9NYQ7 3312 aa5.07□□□□□ -1.6
ATXN3-228ENST00000554592 NUP205Q92621 2012 aa5.07□□□□□ -1.6
ATXN3-228ENST00000554592 ITPR1Q14643 2758 aa5.07□□□□□ -1.6
ATXN3-228ENST00000554592 EML5Q05BV3 1969 aa5.07□□□□□ -1.6
ATXN3-228ENST00000554592 MAST4O15021 2626 aa5.07□□□□□ -1.6
ATXN3-228ENST00000554592 NUP210Q8TEM1 1887 aaPredicted RBP5.07□□□□□ -1.6
ATXN3-228ENST00000554592 PCDH15Q96QU1 1955 aa5.06□□□□□ -1.6
ATXN3-228ENST00000554592 VILLO15195 856 aa5.06□□□□□ -1.6
ATXN3-228ENST00000554592 YKT6O15498 198 aa5.06□□□□□ -1.6
ATXN3-228ENST00000554592 AKAP8O43823 692 aaKnown RBP5.06□□□□□ -1.6
ATXN3-228ENST00000554592 TBCAO75347 108 aaKnown RBP5.06□□□□□ -1.6
ATXN3-228ENST00000554592 TACC1O75410 805 aa5.06□□□□□ -1.6
ATXN3-228ENST00000554592 TMEM191BP0C7N4 346 aa5.06□□□□□ -1.6
ATXN3-228ENST00000554592 IRF1P10914 325 aa5.06□□□□□ -1.6
ATXN3-228ENST00000554592 TACR2P21452 398 aa5.06□□□□□ -1.6
ATXN3-228ENST00000554592 FPR1P21462 350 aa5.06□□□□□ -1.6
ATXN3-228ENST00000554592 PTPN7P35236 360 aa5.06□□□□□ -1.6
ATXN3-228ENST00000554592 ATP5C1P36542 298 aaKnown RBP5.06□□□□□ -1.6
ATXN3-228ENST00000554592 ACVRL1P37023 503 aa5.06□□□□□ -1.6
ATXN3-228ENST00000554592 UBA7P41226 1012 aa5.06□□□□□ -1.6
ATXN3-228ENST00000554592 COPAP53621 1224 aa5.06□□□□□ -1.6
ATXN3-228ENST00000554592 CACNA2D1P54289 1103 aa5.06□□□□□ -1.6
ATXN3-228ENST00000554592 BCAT1P54687 386 aa5.06□□□□□ -1.6
ATXN3-228ENST00000554592 CDH8P55286 799 aa5.06□□□□□ -1.6
ATXN3-228ENST00000554592 C21orf59P57076 290 aa5.06□□□□□ -1.6
ATXN3-228ENST00000554592 TMPRSS3P57727 454 aa5.06□□□□□ -1.6
ATXN3-228ENST00000554592 E2F1Q01094 437 aa5.06□□□□□ -1.6
ATXN3-228ENST00000554592 TLE1Q04724 770 aa5.06□□□□□ -1.6
ATXN3-228ENST00000554592 ZBTB16Q05516 673 aa5.06□□□□□ -1.6
ATXN3-228ENST00000554592 DNAJC3Q13217 504 aa5.06□□□□□ -1.6
ATXN3-228ENST00000554592 MTM1Q13496 603 aa5.06□□□□□ -1.6
ATXN3-228ENST00000554592 DHX8Q14562 1220 aaKnown RBP5.06□□□□□ -1.6
ATXN3-228ENST00000554592 ANO6Q4KMQ2 910 aa5.06□□□□□ -1.6
ATXN3-228ENST00000554592 KHDC1Q4VXA5 237 aaKnown RBP5.06□□□□□ -1.6
ATXN3-228ENST00000554592 MIIPQ5JXC2 388 aa5.06□□□□□ -1.6
ATXN3-228ENST00000554592 PRAMEF14Q5SWL7 426 aa5.06□□□□□ -1.6
ATXN3-228ENST00000554592 THEMIS2Q5TEJ8 643 aa5.06□□□□□ -1.6
ATXN3-228ENST00000554592 ARHGAP40Q5TG30 622 aa5.06□□□□□ -1.6
ATXN3-228ENST00000554592 ARL6IP4Q66PJ3 421 aaKnown RBP5.06□□□□□ -1.6
ATXN3-228ENST00000554592 CCDC83Q8IWF9 413 aa5.06□□□□□ -1.6
ATXN3-228ENST00000554592 CMTM4Q8IZR5 234 aa5.06□□□□□ -1.6
ATXN3-228ENST00000554592 FAM184AQ8NB25 1140 aa5.06□□□□□ -1.6
ATXN3-228ENST00000554592 OR6B3Q8NGW1 331 aa5.06□□□□□ -1.6
ATXN3-228ENST00000554592 OR2T3Q8NH03 318 aa5.06□□□□□ -1.6
ATXN3-228ENST00000554592 SCAMP5Q8TAC9 235 aa5.06□□□□□ -1.6
ATXN3-228ENST00000554592 IL17DQ8TAD2 202 aa5.06□□□□□ -1.6
ATXN3-228ENST00000554592 SAP25Q8TEE9 199 aa5.06□□□□□ -1.6
ATXN3-228ENST00000554592 SNRNP27Q8WVK2 155 aaKnown RBP5.06□□□□□ -1.6
ATXN3-228ENST00000554592 RFFLQ8WZ73 363 aa5.06□□□□□ -1.6
ATXN3-228ENST00000554592 BIRC7Q96CA5 298 aa5.06□□□□□ -1.6
ATXN3-228ENST00000554592 CALML4Q96GE6 196 aa5.06□□□□□ -1.6
ATXN3-228ENST00000554592 ANKRD36BP1Q96IX9 119 aa5.06□□□□□ -1.6
ATXN3-228ENST00000554592 AK8Q96MA6 479 aa5.06□□□□□ -1.6
ATXN3-228ENST00000554592 ZNF578Q96N58 590 aaPredicted RBP5.06□□□□□ -1.6
ATXN3-228ENST00000554592 ACCSQ96QU6 501 aa5.06□□□□□ -1.6
ATXN3-228ENST00000554592 MMS19Q96T76 1030 aa5.06□□□□□ -1.6
ATXN3-228ENST00000554592 LGMNQ99538 433 aa5.06□□□□□ -1.6
ATXN3-228ENST00000554592 MRPL45Q9BRJ2 306 aaKnown RBP5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms