RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 PCYT1AP49585 367 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 IST1P53990 364 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 EPHB1P54762 984 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 ELLP55199 621 aaPredicted RBP4.48□□□□□ -1.69
ATXN3-227ENST00000554491 CLRN1P58418 232 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 RAP2BP61225 183 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 GNGT1P63211 74 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 NOP14P78316 857 aaKnown RBP4.48□□□□□ -1.69
ATXN3-227ENST00000554491 SIM1P81133 766 aaPredicted RBP4.48□□□□□ -1.69
ATXN3-227ENST00000554491 TFF2Q03403 129 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 PPATQ06203 517 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 LGALS3BPQ08380 585 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 TBX2Q13207 712 aaPredicted RBP4.48□□□□□ -1.69
ATXN3-227ENST00000554491 PTK2BQ14289 1009 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 MXD4Q14582 209 aaPredicted RBP4.48□□□□□ -1.69
ATXN3-227ENST00000554491 TSC22D1Q15714 1073 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 AAK1Q2M2I8 961 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 MST1LQ2TV78 715 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 AARDQ4LEZ3 155 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 ANKRD20A8PQ5CZ79 823 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 TCTE1Q5JU00 501 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 MAP3K21Q5TCX8 1036 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 PDPK2PQ6A1A2 396 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 PPP1R2P3Q6NXS1 205 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 CCDC149Q6ZUS6 474 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 UNC13DQ70J99 1090 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 PDZD4Q76G19 769 aaPredicted RBP4.48□□□□□ -1.69
ATXN3-227ENST00000554491 CACNA2D4Q7Z3S7 1137 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 KCTD20Q7Z5Y7 419 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 PATL1Q86TB9 770 aaKnown RBP4.48□□□□□ -1.69
ATXN3-227ENST00000554491 DPP9Q86TI2 863 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 MMAAQ8IVH4 418 aaKnown RBP4.48□□□□□ -1.69
ATXN3-227ENST00000554491 MAPKAPK5Q8IW41 473 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 ELMOD1Q8N336 334 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 TMEM132CQ8N3T6 1108 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 CCNYL1Q8N7R7 359 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 MAGEB6Q8N7X4 407 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 FAM133AQ8N9E0 248 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 NOA1Q8NC60 698 aaKnown RBP4.48□□□□□ -1.69
ATXN3-227ENST00000554491 OR2W6PQ8NHA6 318 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 RFWD2Q8NHY2 731 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 IFI44Q8TCB0 444 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 UTP15Q8TED0 518 aaKnown RBP4.48□□□□□ -1.69
ATXN3-227ENST00000554491 GRK7Q8WTQ7 553 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 RAPGEF5Q92565 580 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 SLC5A5Q92911 643 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 EME1Q96AY2 570 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 COA7Q96BR5 231 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 TIFAQ96CG3 184 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 EAF2Q96CJ1 260 aaPredicted RBP4.48□□□□□ -1.69
ATXN3-227ENST00000554491 IQCDQ96DY2 449 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 PRMT6Q96LA8 375 aaPredicted RBP4.48□□□□□ -1.69
ATXN3-227ENST00000554491 CMTM3Q96MX0 182 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 RUNDC3BQ96NL0 473 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 MED15Q96RN5 788 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 PSD2Q9BQI7 771 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 PI4K2AQ9BTU6 479 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 MLPHQ9BV36 600 aaPredicted RBP4.48□□□□□ -1.69
ATXN3-227ENST00000554491 SPATA5L1Q9BVQ7 753 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 FTOQ9C0B1 505 aaKnown RBP eCLIP4.48□□□□□ -1.69
ATXN3-227ENST00000554491 TMEM39BQ9GZU3 492 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 NDST4Q9H3R1 872 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 KIAA1586Q9HCI6 787 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 WDR6Q9NNW5 1121 aaKnown RBP4.48□□□□□ -1.69
ATXN3-227ENST00000554491 NLRC4Q9NPP4 1024 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 ASNSD1Q9NWL6 643 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 GIN1Q9NXP7 522 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 SENP1Q9P0U3 644 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 LNPEPQ9UIQ6 1025 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 FAF1Q9UNN5 650 aaPredicted RBP4.48□□□□□ -1.69
ATXN3-227ENST00000554491 TMX2Q9Y320 296 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 IFT52Q9Y366 437 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 IPPQ9Y573 584 aa4.48□□□□□ -1.69
ATXN3-227ENST00000554491 KMT2EQ8IZD2 1858 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 DNAH12Q6ZR08 3092 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 REV3LO60673 3130 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 SMIM31A0A1B0GVY4 71 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 AP5Z1O43299 807 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 NBNO60934 754 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 CRTAPO75718 401 aaPredicted RBP4.47□□□□□ -1.69
ATXN3-227ENST00000554491 C1QL1O75973 258 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 MATN4O95460 622 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 GAS8O95995 478 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 IGLV2-14P01704 120 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 MT-ND3P03897 115 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 PDHA1P08559 390 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 POU2F1P14859 743 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 ITGA2P17301 1181 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 LRPAP1P30533 357 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 ADSLP30566 484 aaPredicted RBP4.47□□□□□ -1.69
ATXN3-227ENST00000554491 IDUAP35475 653 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 SOX5P35711 763 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 RGS2P41220 211 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 PHKA1P46020 1223 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 IFNAR2P48551 515 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 STAT2P52630 851 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 ARFIP2P53365 341 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 PDE1AP54750 535 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 SLC12A2P55011 1212 aa4.47□□□□□ -1.69
ATXN3-227ENST00000554491 RAB14P61106 215 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms