RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 PPP6R3Q5H9R7 873 aaPredicted RBP2.73□□□□□ -1.97
PRPF39-206ENST00000554429 RTP2Q5QGT7 225 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 CES4AQ5XG92 561 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 PLA2G4FQ68DD2 849 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 SCYL2Q6P3W7 929 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 FUT10Q6P4F1 479 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 FBXO38Q6PIJ6 1188 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 TRIM65Q6PJ69 517 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 CD300LGQ6UXG3 332 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 CRELD2Q6UXH1 353 aaPredicted RBP2.73□□□□□ -1.97
PRPF39-206ENST00000554429 ALKAL1Q6UXT8 129 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 MIER3Q7Z3K6 550 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 CPLX4Q7Z7G2 160 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 AKAP14Q86UN6 197 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 VPS36Q86VN1 386 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 TPRA1Q86W33 373 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 MICU3Q86XE3 530 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 PALB2Q86YC2 1186 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 LINC00346Q8IVM7 164 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 METTL13Q8N6R0 699 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 CCNYL1Q8N7R7 359 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 C12orf76Q8N812 135 aaPredicted RBP2.73□□□□□ -1.97
PRPF39-206ENST00000554429 KDF1Q8NAX2 398 aaPredicted RBP2.73□□□□□ -1.97
PRPF39-206ENST00000554429 OR6S1Q8NH40 331 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 AKR7LQ8NHP1 331 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 ASZ1Q8WWH4 475 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 SMG7Q92540 1137 aaKnown RBP2.73□□□□□ -1.97
PRPF39-206ENST00000554429 GRAMD1AQ96CP6 724 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 EEF2KMTQ96G04 330 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 FAM111AQ96PZ2 611 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 AGAP2Q99490 1192 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 HSD17B14Q9BPX1 270 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 RBM4BQ9BQ04 359 aaKnown RBP2.73□□□□□ -1.97
PRPF39-206ENST00000554429 CLSTN3Q9BQT9 956 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 RBM4Q9BWF3 364 aaKnown RBP2.73□□□□□ -1.97
PRPF39-206ENST00000554429 GPR61Q9BZJ8 451 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 ABCG8Q9H221 673 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 COQ10BQ9H8M1 238 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 BRF2Q9HAW0 419 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 XPNPEP1Q9NQW7 623 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 ZNF446Q9NWS9 450 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 ARHGEF38Q9NXL2 777 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 GDAP2Q9NXN4 497 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 SMPD3Q9NY59 655 aaPredicted RBP2.73□□□□□ -1.97
PRPF39-206ENST00000554429 IL37Q9NZH6 218 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 EXTL2Q9UBQ6 330 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 DDX25Q9UHL0 483 aaKnown RBP2.73□□□□□ -1.97
PRPF39-206ENST00000554429 DERAQ9Y315 318 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 TRAF6Q9Y4K3 522 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 SF3B1O75533 1304 aaKnown RBP eCLIP2.73□□□□□ -1.97
PRPF39-206ENST00000554429 PTPRDP23468 1912 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 KLF18A0A0U1RQI7 1052 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 HEATR9A2RTY3 570 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 BECN2A8MW95 431 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 CDK2AP1O14519 115 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 SYN3O14994 580 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 PGRMC2O15173 223 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 CLDN3O15551 220 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 DEXIO95424 95 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 FGF19O95750 216 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 GNA14O95837 355 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 ECDO95905 644 aaPredicted RBP2.73□□□□□ -1.97
PRPF39-206ENST00000554429 CYC1P08574 325 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 ACAA1P09110 424 aaPredicted RBP2.73□□□□□ -1.97
PRPF39-206ENST00000554429 AHCYP23526 432 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 CSTF2P33240 577 aaKnown RBP eCLIP2.73□□□□□ -1.97
PRPF39-206ENST00000554429 LSP1P33241 339 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 GP5P40197 560 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 KCNJ5P48544 419 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 CLCNKAP51800 687 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 RAD23AP54725 363 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 GDF10P55107 478 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 GMFBP60983 142 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 PPP2R2AP63151 447 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 MRPS25P82663 173 aaKnown RBP2.73□□□□□ -1.97
PRPF39-206ENST00000554429 GALNT2Q10471 571 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 DNAJC3Q13217 504 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 NCAPHQ15003 741 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 EMC2Q15006 297 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 KARSQ15046 597 aaKnown RBP2.73□□□□□ -1.97
PRPF39-206ENST00000554429 MAPRE2Q15555 327 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 DCAF4L1Q3SXM0 396 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 CACHD1Q5VU97 1274 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 SLC8B1Q6J4K2 584 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 SLC27A1Q6PCB7 646 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 TAS1R1Q7RTX1 841 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 CUZD1Q86UP6 607 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 TSPYL5Q86VY4 417 aaPredicted RBP2.73□□□□□ -1.97
PRPF39-206ENST00000554429 DENND6AQ8IWF6 608 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 CNTN4Q8IWV2 1026 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 FIBINQ8TAL6 211 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 MAIP1Q8WWC4 291 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 AUTS2Q8WXX7 1259 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 LRTOMTQ8WZ04 291 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 ZNF669Q96BR6 464 aaPredicted RBP2.73□□□□□ -1.97
PRPF39-206ENST00000554429 LRRC39Q96DD0 335 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 SAAL1Q96ER3 474 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 FCRL4Q96PJ5 515 aa2.73□□□□□ -1.97
PRPF39-206ENST00000554429 PPP1R10Q96QC0 940 aaKnown RBP2.73□□□□□ -1.97
PRPF39-206ENST00000554429 PRPF18Q99633 342 aaKnown RBP2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms