RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 GSDMCQ9BYG8 508 aa6.61□□□□□ -1.35
SLIRP-203ENST00000554074 FRMD8Q9BZ67 464 aaPredicted RBP6.61□□□□□ -1.35
SLIRP-203ENST00000554074 B3GNT4Q9C0J1 378 aa6.61□□□□□ -1.35
SLIRP-203ENST00000554074 THAP2Q9H0W7 228 aa6.61□□□□□ -1.35
SLIRP-203ENST00000554074 NOD2Q9HC29 1040 aa6.61□□□□□ -1.35
SLIRP-203ENST00000554074 PHPT1Q9NRX4 125 aaPredicted RBP6.61□□□□□ -1.35
SLIRP-203ENST00000554074 ETNK2Q9NVF9 386 aa6.61□□□□□ -1.35
SLIRP-203ENST00000554074 HAUS2Q9NVX0 235 aa6.61□□□□□ -1.35
SLIRP-203ENST00000554074 SIRPGQ9P1W8 387 aa6.61□□□□□ -1.35
SLIRP-203ENST00000554074 RABGEF1Q9UJ41 708 aa6.61□□□□□ -1.35
SLIRP-203ENST00000554074 DNPEPQ9ULA0 475 aa6.61□□□□□ -1.35
SLIRP-203ENST00000554074 NENFQ9UMX5 172 aa6.61□□□□□ -1.35
SLIRP-203ENST00000554074 LUC7L2Q9Y383 392 aaKnown RBP6.61□□□□□ -1.35
SLIRP-203ENST00000554074 PCDHGC4Q9Y5F7 938 aa6.61□□□□□ -1.35
SLIRP-203ENST00000554074 SMG1Q96Q15 3661 aaKnown RBP6.61□□□□□ -1.35
SLIRP-203ENST00000554074 PIEZO2Q9H5I5 2752 aa6.6□□□□□ -1.35
SLIRP-203ENST00000554074 NPIPB15A6NHN6 443 aaPredicted RBP6.6□□□□□ -1.35
SLIRP-203ENST00000554074 CYSRT1A8MQ03 144 aa6.6□□□□□ -1.35
SLIRP-203ENST00000554074 K7ENP7 123 aa6.6□□□□□ -1.35
SLIRP-203ENST00000554074 ZW10O43264 779 aa6.6□□□□□ -1.35
SLIRP-203ENST00000554074 C1QL1O75973 258 aa6.6□□□□□ -1.35
SLIRP-203ENST00000554074 GYPCP04921 128 aa6.6□□□□□ -1.35
SLIRP-203ENST00000554074 RPLP0P05388 317 aaKnown RBP6.6□□□□□ -1.35
SLIRP-203ENST00000554074 CEACAM5P06731 702 aa6.6□□□□□ -1.35
SLIRP-203ENST00000554074 IVLP07476 585 aa6.6□□□□□ -1.35
SLIRP-203ENST00000554074 CCNB1P14635 433 aa6.6□□□□□ -1.35
SLIRP-203ENST00000554074 MX2P20592 715 aa6.6□□□□□ -1.35
SLIRP-203ENST00000554074 LHCGRP22888 699 aa6.6□□□□□ -1.35
SLIRP-203ENST00000554074 CCNCP24863 283 aa6.6□□□□□ -1.35
SLIRP-203ENST00000554074 MAN1A1P33908 653 aa6.6□□□□□ -1.35
SLIRP-203ENST00000554074 UGT1A5P35504 534 aa6.6□□□□□ -1.35
SLIRP-203ENST00000554074 GARSP41250 739 aaKnown RBP6.6□□□□□ -1.35
SLIRP-203ENST00000554074 GPR3P46089 330 aa6.6□□□□□ -1.35
SLIRP-203ENST00000554074 MAXP61244 160 aa6.6□□□□□ -1.35
SLIRP-203ENST00000554074 RPL26P61254 145 aaKnown RBP6.6□□□□□ -1.35
SLIRP-203ENST00000554074 ILF3Q12906 894 aaKnown RBP eCLIP6.6□□□□□ -1.35
SLIRP-203ENST00000554074 ARHGEF7Q14155 803 aa6.6□□□□□ -1.35
SLIRP-203ENST00000554074 KRT81Q14533 505 aa6.6□□□□□ -1.35
SLIRP-203ENST00000554074 IFI16Q16666 785 aaKnown RBP6.6□□□□□ -1.35
SLIRP-203ENST00000554074 CCDC122Q5T0U0 273 aa6.6□□□□□ -1.35
SLIRP-203ENST00000554074 INO80CQ6PI98 192 aaPredicted RBP6.6□□□□□ -1.35
SLIRP-203ENST00000554074 NYAP1Q6ZVC0 841 aa6.6□□□□□ -1.35
SLIRP-203ENST00000554074 Q6ZVL8 140 aa6.6□□□□□ -1.35
SLIRP-203ENST00000554074 ZNF765Q7L2R6 523 aa6.6□□□□□ -1.35
SLIRP-203ENST00000554074 RAB11FIP2Q7L804 512 aa6.6□□□□□ -1.35
SLIRP-203ENST00000554074 HSD11B1LQ7Z5J1 315 aa6.6□□□□□ -1.35
SLIRP-203ENST00000554074 SPRED1Q7Z699 444 aa6.6□□□□□ -1.35
SLIRP-203ENST00000554074 TECPR1Q7Z6L1 1165 aa6.6□□□□□ -1.35
SLIRP-203ENST00000554074 B3GNT8Q7Z7M8 397 aa6.6□□□□□ -1.35
SLIRP-203ENST00000554074 HEATR4Q86WZ0 1026 aa6.6□□□□□ -1.35
SLIRP-203ENST00000554074 VSIG1Q86XK7 387 aa6.6□□□□□ -1.35
SLIRP-203ENST00000554074 PELI3Q8N2H9 469 aa6.6□□□□□ -1.35
SLIRP-203ENST00000554074 FBXO39Q8N4B4 442 aa6.6□□□□□ -1.35
SLIRP-203ENST00000554074 FAM46DQ8NEK8 389 aa6.6□□□□□ -1.35
SLIRP-203ENST00000554074 PIH1D2Q8WWB5 315 aa6.6□□□□□ -1.35
SLIRP-203ENST00000554074 FAF2Q96CS3 445 aa6.6□□□□□ -1.35
SLIRP-203ENST00000554074 NAF1Q96HR8 494 aaKnown RBP6.6□□□□□ -1.35
SLIRP-203ENST00000554074 MRFAP1L1Q96HT8 127 aa6.6□□□□□ -1.35
SLIRP-203ENST00000554074 TSGA13Q96PP4 275 aa6.6□□□□□ -1.35
SLIRP-203ENST00000554074 LYSMD1Q96S90 227 aa6.6□□□□□ -1.35
SLIRP-203ENST00000554074 SEMA3CQ99985 751 aa6.6□□□□□ -1.35
SLIRP-203ENST00000554074 ZNF670Q9BS34 389 aa6.6□□□□□ -1.35
SLIRP-203ENST00000554074 POLR1EQ9GZS1 481 aaKnown RBP6.6□□□□□ -1.35
SLIRP-203ENST00000554074 TMEM168Q9H0V1 697 aa6.6□□□□□ -1.35
SLIRP-203ENST00000554074 EPB41L5Q9HCM4 733 aa6.6□□□□□ -1.35
SLIRP-203ENST00000554074 CYP4F12Q9HCS2 524 aa6.6□□□□□ -1.35
SLIRP-203ENST00000554074 MRPL40Q9NQ50 206 aaKnown RBP6.6□□□□□ -1.35
SLIRP-203ENST00000554074 IFNKQ9P0W0 207 aa6.6□□□□□ -1.35
SLIRP-203ENST00000554074 LRIT1Q9P2V4 623 aa6.6□□□□□ -1.35
SLIRP-203ENST00000554074 UVRAGQ9P2Y5 699 aa6.6□□□□□ -1.35
SLIRP-203ENST00000554074 ATXN7L1Q9ULK2 861 aaPredicted RBP6.6□□□□□ -1.35
SLIRP-203ENST00000554074 RPL26L1Q9UNX3 145 aaKnown RBP6.6□□□□□ -1.35
SLIRP-203ENST00000554074 SLC17A4Q9Y2C5 497 aa6.6□□□□□ -1.35
SLIRP-203ENST00000554074 RNF215Q9Y6U7 377 aa6.6□□□□□ -1.35
SLIRP-203ENST00000554074 ZNF462Q96JM2 2506 aa6.59□□□□□ -1.35
SLIRP-203ENST00000554074 A0A0J9YYE9 177 aa6.59□□□□□ -1.35
SLIRP-203ENST00000554074 TTC24A2A3L6 582 aaPredicted RBP6.59□□□□□ -1.35
SLIRP-203ENST00000554074 PMS2P1A4D2B8 440 aa6.59□□□□□ -1.35
SLIRP-203ENST00000554074 A8MX80 341 aa6.59□□□□□ -1.35
SLIRP-203ENST00000554074 ZNF487B1APH4 448 aa6.59□□□□□ -1.35
SLIRP-203ENST00000554074 MATN3O15232 486 aa6.59□□□□□ -1.35
SLIRP-203ENST00000554074 CASC3O15234 703 aaKnown RBP6.59□□□□□ -1.35
SLIRP-203ENST00000554074 NVLO15381 856 aaKnown RBP6.59□□□□□ -1.35
SLIRP-203ENST00000554074 MFSD11O43934 449 aa6.59□□□□□ -1.35
SLIRP-203ENST00000554074 PROSCO94903 275 aa6.59□□□□□ -1.35
SLIRP-203ENST00000554074 CPNE6O95741 557 aa6.59□□□□□ -1.35
SLIRP-203ENST00000554074 SOD1P00441 154 aa6.59□□□□□ -1.35
SLIRP-203ENST00000554074 TRBC1P01850 177 aa6.59□□□□□ -1.35
SLIRP-203ENST00000554074 FGF1P05230 155 aa6.59□□□□□ -1.35
SLIRP-203ENST00000554074 PDHA1P08559 390 aa6.59□□□□□ -1.35
SLIRP-203ENST00000554074 KRT7P08729 469 aa6.59□□□□□ -1.35
SLIRP-203ENST00000554074 H2AFZP0C0S5 128 aa6.59□□□□□ -1.35
SLIRP-203ENST00000554074 CA4P22748 312 aa6.59□□□□□ -1.35
SLIRP-203ENST00000554074 CD82P27701 267 aa6.59□□□□□ -1.35
SLIRP-203ENST00000554074 SLC5A2P31639 672 aa6.59□□□□□ -1.35
SLIRP-203ENST00000554074 ETV3P41162 512 aa6.59□□□□□ -1.35
SLIRP-203ENST00000554074 STC1P52823 247 aa6.59□□□□□ -1.35
SLIRP-203ENST00000554074 B4GALNT1Q00973 533 aa6.59□□□□□ -1.35
SLIRP-203ENST00000554074 MMRN1Q13201 1228 aa6.59□□□□□ -1.35
SLIRP-203ENST00000554074 CLN3Q13286 438 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 155.9 ms