RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 BPIFA1Q9NP55 256 aa10.46□□□□□ -0.73
TMEM55B-205ENST00000554028 LTB4R2Q9NPC1 389 aa10.46□□□□□ -0.73
TMEM55B-205ENST00000554028 IARS2Q9NSE4 1012 aaKnown RBP10.46□□□□□ -0.73
TMEM55B-205ENST00000554028 IL17CQ9P0M4 197 aa10.46□□□□□ -0.73
TMEM55B-205ENST00000554028 PSMC3IPQ9P2W1 217 aaPredicted RBP10.46□□□□□ -0.73
TMEM55B-205ENST00000554028 SLC2A6Q9UGQ3 507 aa10.46□□□□□ -0.73
TMEM55B-205ENST00000554028 ZNF180Q9UJW8 692 aa10.46□□□□□ -0.73
TMEM55B-205ENST00000554028 KCTD3Q9Y597 815 aa10.46□□□□□ -0.73
TMEM55B-205ENST00000554028 BRWD1Q9NSI6 2320 aa10.46□□□□□ -0.74
TMEM55B-205ENST00000554028 MYO18AQ92614 2054 aaKnown RBP10.45□□□□□ -0.74
TMEM55B-205ENST00000554028 KRBA1A5PL33 1030 aa10.45□□□□□ -0.74
TMEM55B-205ENST00000554028 CHURC1-FNTBB4DL54 471 aa10.45□□□□□ -0.74
TMEM55B-205ENST00000554028 H0Y858 1186 aa10.45□□□□□ -0.74
TMEM55B-205ENST00000554028 H7C0S8 307 aa10.45□□□□□ -0.74
TMEM55B-205ENST00000554028 PSMD11O00231 422 aa10.45□□□□□ -0.74
TMEM55B-205ENST00000554028 MID1O15344 667 aa10.45□□□□□ -0.74
TMEM55B-205ENST00000554028 CD3EAPO15446 510 aaKnown RBP10.45□□□□□ -0.74
TMEM55B-205ENST00000554028 TSPAN6O43657 245 aa10.45□□□□□ -0.74
TMEM55B-205ENST00000554028 ADAM23O75077 832 aa10.45□□□□□ -0.74
TMEM55B-205ENST00000554028 RNASEH2AO75792 299 aaKnown RBP10.45□□□□□ -0.74
TMEM55B-205ENST00000554028 GOT2P00505 430 aaKnown RBP10.45□□□□□ -0.74
TMEM55B-205ENST00000554028 ELFN1P0C7U0 828 aa10.45□□□□□ -0.74
TMEM55B-205ENST00000554028 KRT15P19012 456 aa10.45□□□□□ -0.74
TMEM55B-205ENST00000554028 PSMA3P25788 255 aa10.45□□□□□ -0.74
TMEM55B-205ENST00000554028 SPRP35270 261 aaPredicted RBP10.45□□□□□ -0.74
TMEM55B-205ENST00000554028 SPAM1P38567 509 aa10.45□□□□□ -0.74
TMEM55B-205ENST00000554028 GP5P40197 560 aa10.45□□□□□ -0.74
TMEM55B-205ENST00000554028 P2RY2P41231 377 aa10.45□□□□□ -0.74
TMEM55B-205ENST00000554028 CNTN1Q12860 1018 aa10.45□□□□□ -0.74
TMEM55B-205ENST00000554028 CRY1Q16526 586 aa10.45□□□□□ -0.74
TMEM55B-205ENST00000554028 ZRANB3Q5FWF4 1079 aa10.45□□□□□ -0.74
TMEM55B-205ENST00000554028 UBAP2Q5T6F2 1119 aaKnown RBP10.45□□□□□ -0.74
TMEM55B-205ENST00000554028 TEDDM1Q5T9Z0 273 aa10.45□□□□□ -0.74
TMEM55B-205ENST00000554028 LYPLAL1Q5VWZ2 237 aa10.45□□□□□ -0.74
TMEM55B-205ENST00000554028 KIAA1211LQ6NV74 962 aa10.45□□□□□ -0.74
TMEM55B-205ENST00000554028 ADGRD1Q6QNK2 874 aa10.45□□□□□ -0.74
TMEM55B-205ENST00000554028 PTAR1Q7Z6K3 402 aaPredicted RBP10.45□□□□□ -0.74
TMEM55B-205ENST00000554028 STRA8Q7Z7C7 330 aa10.45□□□□□ -0.74
TMEM55B-205ENST00000554028 KBTBD6Q86V97 674 aa10.45□□□□□ -0.74
TMEM55B-205ENST00000554028 PGBD3Q8N328 593 aa10.45□□□□□ -0.74
TMEM55B-205ENST00000554028 OR13J1Q8NGT2 312 aa10.45□□□□□ -0.74
TMEM55B-205ENST00000554028 EPS8L3Q8TE67 593 aaKnown RBP10.45□□□□□ -0.74
TMEM55B-205ENST00000554028 SCG3Q8WXD2 468 aaKnown RBP10.45□□□□□ -0.74
TMEM55B-205ENST00000554028 VOPP1Q96AW1 172 aa10.45□□□□□ -0.74
TMEM55B-205ENST00000554028 MTBPQ96DY7 904 aa10.45□□□□□ -0.74
TMEM55B-205ENST00000554028 ERLEC1Q96DZ1 483 aa10.45□□□□□ -0.74
TMEM55B-205ENST00000554028 PGM2Q96G03 612 aa10.45□□□□□ -0.74
TMEM55B-205ENST00000554028 SGSM3Q96HU1 749 aa10.45□□□□□ -0.74
TMEM55B-205ENST00000554028 SMIM14Q96QK8 99 aa10.45□□□□□ -0.74
TMEM55B-205ENST00000554028 TCF12Q99081 682 aa10.45□□□□□ -0.74
TMEM55B-205ENST00000554028 OSBPL6Q9BZF3 934 aa10.45□□□□□ -0.74
TMEM55B-205ENST00000554028 PLAC1Q9HBJ0 212 aa10.45□□□□□ -0.74
TMEM55B-205ENST00000554028 CATSPERZQ9NTU4 200 aa10.45□□□□□ -0.74
TMEM55B-205ENST00000554028 POLR3BQ9NW08 1133 aaPredicted RBP10.45□□□□□ -0.74
TMEM55B-205ENST00000554028 FBXL12Q9NXK8 326 aa10.45□□□□□ -0.74
TMEM55B-205ENST00000554028 KCTD5Q9NXV2 234 aa10.45□□□□□ -0.74
TMEM55B-205ENST00000554028 TBK1Q9UHD2 729 aa10.45□□□□□ -0.74
TMEM55B-205ENST00000554028 VPS9D1Q9Y2B5 631 aa10.45□□□□□ -0.74
TMEM55B-205ENST00000554028 FNDC3AQ9Y2H6 1198 aaKnown RBP10.45□□□□□ -0.74
TMEM55B-205ENST00000554028 CUL9Q8IWT3 2517 aa10.45□□□□□ -0.74
TMEM55B-205ENST00000554028 TICRRQ7Z2Z1 1910 aa10.45□□□□□ -0.74
TMEM55B-205ENST00000554028 GLYATL1P3A0A0U1RQE8 302 aa10.44□□□□□ -0.74
TMEM55B-205ENST00000554028 A0A1W2PQF6 199 aa10.44□□□□□ -0.74
TMEM55B-205ENST00000554028 TCRBV21S2A2A0A5A6 115 aa10.44□□□□□ -0.74
TMEM55B-205ENST00000554028 CCDC162PA2VCL2 907 aa10.44□□□□□ -0.74
TMEM55B-205ENST00000554028 ANTXRLA6NF34 631 aa10.44□□□□□ -0.74
TMEM55B-205ENST00000554028 CXorf49A8MYA2 514 aaPredicted RBP10.44□□□□□ -0.74
TMEM55B-205ENST00000554028 HMGB1P1B2RPK0 211 aaPredicted RBP10.44□□□□□ -0.74
TMEM55B-205ENST00000554028 GOLGA8TH3BQL2 631 aa10.44□□□□□ -0.74
TMEM55B-205ENST00000554028 AGPSO00116 658 aa10.44□□□□□ -0.74
TMEM55B-205ENST00000554028 AP1G1O43747 822 aa10.44□□□□□ -0.74
TMEM55B-205ENST00000554028 LZTS3O60299 673 aaPredicted RBP10.44□□□□□ -0.74
TMEM55B-205ENST00000554028 NDUFS3O75489 264 aa10.44□□□□□ -0.74
TMEM55B-205ENST00000554028 PCDH8O95206 1070 aa10.44□□□□□ -0.74
TMEM55B-205ENST00000554028 SNRPAP09012 282 aaKnown RBP10.44□□□□□ -0.74
TMEM55B-205ENST00000554028 ITGALP20701 1170 aa10.44□□□□□ -0.74
TMEM55B-205ENST00000554028 TARSP26639 723 aaKnown RBP10.44□□□□□ -0.74
TMEM55B-205ENST00000554028 MC4RP32245 332 aa10.44□□□□□ -0.74
TMEM55B-205ENST00000554028 MMP12P39900 470 aa10.44□□□□□ -0.74
TMEM55B-205ENST00000554028 ARCN1P48444 511 aaKnown RBP10.44□□□□□ -0.74
TMEM55B-205ENST00000554028 TTPAP49638 278 aa10.44□□□□□ -0.74
TMEM55B-205ENST00000554028 STC1P52823 247 aa10.44□□□□□ -0.74
TMEM55B-205ENST00000554028 COPAP53621 1224 aa10.44□□□□□ -0.74
TMEM55B-205ENST00000554028 CSE1LP55060 971 aaKnown RBP10.44□□□□□ -0.74
TMEM55B-205ENST00000554028 SEMG2Q02383 582 aa10.44□□□□□ -0.74
TMEM55B-205ENST00000554028 PTSQ03393 145 aa10.44□□□□□ -0.74
TMEM55B-205ENST00000554028 CACNG1Q06432 222 aa10.44□□□□□ -0.74
TMEM55B-205ENST00000554028 ITGA9Q13797 1035 aa10.44□□□□□ -0.74
TMEM55B-205ENST00000554028 ACOX1Q15067 660 aa10.44□□□□□ -0.74
TMEM55B-205ENST00000554028 PTPRRQ15256 657 aa10.44□□□□□ -0.74
TMEM55B-205ENST00000554028 TMED2Q15363 201 aa10.44□□□□□ -0.74
TMEM55B-205ENST00000554028 CDKN3Q16667 212 aa10.44□□□□□ -0.74
TMEM55B-205ENST00000554028 ZNF284Q2VY69 593 aa10.44□□□□□ -0.74
TMEM55B-205ENST00000554028 GPR33Q49SQ1 333 aa10.44□□□□□ -0.74
TMEM55B-205ENST00000554028 TMEM52BQ4KMG9 183 aa10.44□□□□□ -0.74
TMEM55B-205ENST00000554028 LRRC73Q5JTD7 316 aa10.44□□□□□ -0.74
TMEM55B-205ENST00000554028 RNF187Q5TA31 235 aaPredicted RBP10.44□□□□□ -0.74
TMEM55B-205ENST00000554028 AGBL2Q5U5Z8 902 aa10.44□□□□□ -0.74
TMEM55B-205ENST00000554028 ZNF470Q6ECI4 717 aa10.44□□□□□ -0.74
TMEM55B-205ENST00000554028 KIAA1324Q6UXG2 1013 aaKnown RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms