RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 GUCA2AQ02747 115 aa8.88□□□□□ -0.99
TDP1-208ENST00000553989 BIRC2Q13490 618 aa8.88□□□□□ -0.99
TDP1-208ENST00000553989 MTM1Q13496 603 aa8.88□□□□□ -0.99
TDP1-208ENST00000553989 SERINC3Q13530 473 aa8.88□□□□□ -0.99
TDP1-208ENST00000553989 ARHGEF7Q14155 803 aa8.88□□□□□ -0.99
TDP1-208ENST00000553989 TGIF1Q15583 401 aa8.88□□□□□ -0.99
TDP1-208ENST00000553989 UGP2Q16851 508 aa8.88□□□□□ -0.99
TDP1-208ENST00000553989 WSCD2Q2TBF2 565 aa8.88□□□□□ -0.99
TDP1-208ENST00000553989 MANEAQ5SRI9 462 aa8.88□□□□□ -0.99
TDP1-208ENST00000553989 PHF19Q5T6S3 580 aa8.88□□□□□ -0.99
TDP1-208ENST00000553989 DNAJC24Q6P3W2 148 aa8.88□□□□□ -0.99
TDP1-208ENST00000553989 DCUN1D2Q6PH85 259 aa8.88□□□□□ -0.99
TDP1-208ENST00000553989 BRAT1Q6PJG6 821 aa8.88□□□□□ -0.99
TDP1-208ENST00000553989 ZNF572Q7Z3I7 529 aaPredicted RBP8.88□□□□□ -0.99
TDP1-208ENST00000553989 ZSCAN1Q8NBB4 408 aa8.88□□□□□ -0.99
TDP1-208ENST00000553989 FAM46DQ8NEK8 389 aa8.88□□□□□ -0.99
TDP1-208ENST00000553989 NEK11Q8NG66 645 aa8.88□□□□□ -0.99
TDP1-208ENST00000553989 SGF29Q96ES7 293 aa8.88□□□□□ -0.99
TDP1-208ENST00000553989 PDXPQ96GD0 296 aa8.88□□□□□ -0.99
TDP1-208ENST00000553989 CELF6Q96J87 481 aaKnown RBP8.88□□□□□ -0.99
TDP1-208ENST00000553989 MCEEQ96PE7 176 aa8.88□□□□□ -0.99
TDP1-208ENST00000553989 ALS2CR12Q96Q35 445 aa8.88□□□□□ -0.99
TDP1-208ENST00000553989 CMKLR1Q99788 373 aa8.88□□□□□ -0.99
TDP1-208ENST00000553989 CINPQ9BW66 212 aaPredicted RBP8.88□□□□□ -0.99
TDP1-208ENST00000553989 TRIM4Q9C037 500 aa8.88□□□□□ -0.99
TDP1-208ENST00000553989 GANQ9H2C0 597 aa8.88□□□□□ -0.99
TDP1-208ENST00000553989 DPEP2Q9H4A9 486 aa8.88□□□□□ -0.99
TDP1-208ENST00000553989 SUV39H2Q9H5I1 410 aa8.88□□□□□ -0.99
TDP1-208ENST00000553989 AKAP7Q9P0M2 348 aaPredicted RBP8.88□□□□□ -0.99
TDP1-208ENST00000553989 LHX3Q9UBR4 397 aa8.88□□□□□ -0.99
TDP1-208ENST00000553989 ADAM21Q9UKJ8 722 aa8.88□□□□□ -0.99
TDP1-208ENST00000553989 ATP8A1Q9Y2Q0 1164 aa8.88□□□□□ -0.99
TDP1-208ENST00000553989 REXO2Q9Y3B8 237 aaKnown RBP8.88□□□□□ -0.99
TDP1-208ENST00000553989 MFHAS1Q9Y4C4 1052 aa8.88□□□□□ -0.99
TDP1-208ENST00000553989 PCDHB11Q9Y5F2 797 aa8.88□□□□□ -0.99
TDP1-208ENST00000553989 PCDHGA7Q9Y5G6 932 aa8.88□□□□□ -0.99
TDP1-208ENST00000553989 PCDHA13Q9Y5I0 950 aa8.88□□□□□ -0.99
TDP1-208ENST00000553989 FLNBO75369 2602 aaKnown RBP8.88□□□□□ -0.99
TDP1-208ENST00000553989 KALRNO60229 2985 aa8.88□□□□□ -0.99
TDP1-208ENST00000553989 COL27A1Q8IZC6 1860 aaPredicted RBP8.87□□□□□ -0.99
TDP1-208ENST00000553989 COL6A6A6NMZ7 2263 aa8.87□□□□□ -0.99
TDP1-208ENST00000553989 A0A1W2PQM1 296 aa8.87□□□□□ -0.99
TDP1-208ENST00000553989 DAPK3O43293 454 aa8.87□□□□□ -0.99
TDP1-208ENST00000553989 AKR1B10O60218 316 aa8.87□□□□□ -0.99
TDP1-208ENST00000553989 PALMO75781 387 aa8.87□□□□□ -0.99
TDP1-208ENST00000553989 ELFN1P0C7U0 828 aa8.87□□□□□ -0.99
TDP1-208ENST00000553989 UNGP13051 313 aaPredicted RBP8.87□□□□□ -0.99
TDP1-208ENST00000553989 GLB1P16278 677 aa8.87□□□□□ -0.99
TDP1-208ENST00000553989 CHRNB2P17787 502 aa8.87□□□□□ -0.99
TDP1-208ENST00000553989 ITIH1P19827 911 aa8.87□□□□□ -0.99
TDP1-208ENST00000553989 KELP23276 732 aa8.87□□□□□ -0.99
TDP1-208ENST00000553989 SERPINA4P29622 427 aa8.87□□□□□ -0.99
TDP1-208ENST00000553989 CCKBRP32239 447 aa8.87□□□□□ -0.99
TDP1-208ENST00000553989 MMP12P39900 470 aa8.87□□□□□ -0.99
TDP1-208ENST00000553989 PPM1FP49593 454 aaPredicted RBP8.87□□□□□ -0.99
TDP1-208ENST00000553989 SRSF6Q13247 344 aaKnown RBP8.87□□□□□ -0.99
TDP1-208ENST00000553989 CASP8Q14790 479 aa8.87□□□□□ -0.99
TDP1-208ENST00000553989 CYTH1Q15438 398 aa8.87□□□□□ -0.99
TDP1-208ENST00000553989 CLEC16AQ2KHT3 1053 aa8.87□□□□□ -0.99
TDP1-208ENST00000553989 CAMK1DQ8IU85 385 aa8.87□□□□□ -0.99
TDP1-208ENST00000553989 C3orf20Q8ND61 904 aa8.87□□□□□ -0.99
TDP1-208ENST00000553989 OR56A4Q8NGH8 313 aa8.87□□□□□ -0.99
TDP1-208ENST00000553989 HCAR2Q8TDS4 363 aa8.87□□□□□ -0.99
TDP1-208ENST00000553989 CENPIQ92674 756 aaPredicted RBP8.87□□□□□ -0.99
TDP1-208ENST00000553989 EXTL1Q92935 676 aa8.87□□□□□ -0.99
TDP1-208ENST00000553989 ZNF641Q96N77 438 aaPredicted RBP8.87□□□□□ -0.99
TDP1-208ENST00000553989 TUBGCP5Q96RT8 1024 aa8.87□□□□□ -0.99
TDP1-208ENST00000553989 DEF6Q9H4E7 631 aa8.87□□□□□ -0.99
TDP1-208ENST00000553989 NOL6Q9H6R4 1146 aaKnown RBP8.87□□□□□ -0.99
TDP1-208ENST00000553989 ATP13A3Q9H7F0 1226 aa8.87□□□□□ -0.99
TDP1-208ENST00000553989 SP110Q9HB58 689 aa8.87□□□□□ -0.99
TDP1-208ENST00000553989 MRPL40Q9NQ50 206 aaKnown RBP8.87□□□□□ -0.99
TDP1-208ENST00000553989 DONSONQ9NYP3 566 aa8.87□□□□□ -0.99
TDP1-208ENST00000553989 FZD10Q9ULW2 581 aa8.87□□□□□ -0.99
TDP1-208ENST00000553989 BZW2Q9Y6E2 419 aaKnown RBP8.87□□□□□ -0.99
TDP1-208ENST00000553989 MGAQ8IWI9 3026 aa8.87□□□□□ -0.99
TDP1-208ENST00000553989 KIF26BQ2KJY2 2108 aa8.87□□□□□ -0.99
TDP1-208ENST00000553989 SETXQ7Z333 2677 aaKnown RBP8.86□□□□□ -0.99
TDP1-208ENST00000553989 PRAMEF33A0A0G2JMD5 474 aa8.86□□□□□ -0.99
TDP1-208ENST00000553989 TSPAN11A1L157 253 aa8.86□□□□□ -0.99
TDP1-208ENST00000553989 GOLGA6CA6NDK9 693 aa8.86□□□□□ -0.99
TDP1-208ENST00000553989 GOLGA6BA6NDN3 693 aa8.86□□□□□ -0.99
TDP1-208ENST00000553989 ARHGAP42A6NI28 874 aa8.86□□□□□ -0.99
TDP1-208ENST00000553989 SIGLEC16A6NMB1 481 aa8.86□□□□□ -0.99
TDP1-208ENST00000553989 A8MX80 341 aa8.86□□□□□ -0.99
TDP1-208ENST00000553989 J3KR12 359 aa8.86□□□□□ -0.99
TDP1-208ENST00000553989 DFFAO00273 331 aa8.86□□□□□ -0.99
TDP1-208ENST00000553989 EEF2KO00418 725 aaKnown RBP8.86□□□□□ -0.99
TDP1-208ENST00000553989 EFSO43281 561 aa8.86□□□□□ -0.99
TDP1-208ENST00000553989 PRAMEF10O60809 474 aa8.86□□□□□ -0.99
TDP1-208ENST00000553989 RECQL5O94762 991 aaPredicted RBP8.86□□□□□ -0.99
TDP1-208ENST00000553989 WISP1O95388 367 aa8.86□□□□□ -0.99
TDP1-208ENST00000553989 SERPING1P05155 500 aa8.86□□□□□ -0.99
TDP1-208ENST00000553989 RHOXF2BP0C7M4 288 aa8.86□□□□□ -0.99
TDP1-208ENST00000553989 GOLGA6DP0CG33 693 aa8.86□□□□□ -0.99
TDP1-208ENST00000553989 ZNF143P52747 638 aaPredicted RBP8.86□□□□□ -0.99
TDP1-208ENST00000553989 AIF1P55008 147 aa8.86□□□□□ -0.99
TDP1-208ENST00000553989 GSCP56915 257 aaPredicted RBP8.86□□□□□ -0.99
TDP1-208ENST00000553989 JAM2P57087 298 aa8.86□□□□□ -0.99
TDP1-208ENST00000553989 KIAA1024LP59773 190 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms