RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 SPATA13Q96N96 652 aa23.23■■□□□ 1.31
NEK9-203ENST00000553945 ABCG8Q9H221 673 aa23.23■■□□□ 1.31
NEK9-203ENST00000553945 TRMT1Q9NXH9 659 aaKnown RBP23.23■■□□□ 1.31
NEK9-203ENST00000553945 FTSJ1Q9UET6 329 aa23.23■■□□□ 1.31
NEK9-203ENST00000553945 PNMA8BQ9ULN7 279 aaPredicted RBP23.23■■□□□ 1.31
NEK9-203ENST00000553945 LOC285095A0A1B0GVY8 99 aa23.22■■□□□ 1.31
NEK9-203ENST00000553945 FFAR2O15552 330 aa23.22■■□□□ 1.31
NEK9-203ENST00000553945 ANXA9O76027 345 aa23.22■■□□□ 1.31
NEK9-203ENST00000553945 SLC4A1P02730 911 aa23.22■■□□□ 1.31
NEK9-203ENST00000553945 PSMB4P28070 264 aa23.22■■□□□ 1.31
NEK9-203ENST00000553945 TRIM23P36406 574 aa23.22■■□□□ 1.31
NEK9-203ENST00000553945 GEMP55040 296 aa23.22■■□□□ 1.31
NEK9-203ENST00000553945 PPARDQ03181 441 aa23.22■■□□□ 1.31
NEK9-203ENST00000553945 PRPSAP1Q14558 356 aa23.22■■□□□ 1.31
NEK9-203ENST00000553945 SIRPB2Q5JXA9 342 aa23.22■■□□□ 1.31
NEK9-203ENST00000553945 HID1Q8IV36 788 aa23.22■■□□□ 1.31
NEK9-203ENST00000553945 PHACTR4Q8IZ21 702 aa23.22■■□□□ 1.31
NEK9-203ENST00000553945 NRSN1Q8IZ57 195 aa23.22■■□□□ 1.31
NEK9-203ENST00000553945 RBFAQ8N0V3 343 aa23.22■■□□□ 1.31
NEK9-203ENST00000553945 SLC25A41Q8N5S1 370 aa23.22■■□□□ 1.31
NEK9-203ENST00000553945 BTN2A2Q8WVV5 523 aa23.22■■□□□ 1.31
NEK9-203ENST00000553945 TSACCQ96A04 125 aaPredicted RBP23.22■■□□□ 1.31
NEK9-203ENST00000553945 AP2M1Q96CW1 435 aa23.22■■□□□ 1.31
NEK9-203ENST00000553945 TMEM121Q9BTD3 319 aa23.22■■□□□ 1.31
NEK9-203ENST00000553945 TCEAL2Q9H3H9 227 aaPredicted RBP23.22■■□□□ 1.31
NEK9-203ENST00000553945 MAGEE1Q9HCI5 957 aa23.22■■□□□ 1.31
NEK9-203ENST00000553945 APOBEC3BQ9UH17 382 aaKnown RBP23.22■■□□□ 1.31
NEK9-203ENST00000553945 SHOC2Q9UQ13 582 aa23.22■■□□□ 1.31
NEK9-203ENST00000553945 C5orf60A6NFR6 353 aa23.21■■□□□ 1.31
NEK9-203ENST00000553945 LDOC1O95751 146 aaPredicted RBP23.21■■□□□ 1.31
NEK9-203ENST00000553945 HOXC4P09017 264 aaPredicted RBP23.21■■□□□ 1.31
NEK9-203ENST00000553945 CXCR5P32302 372 aa23.21■■□□□ 1.31
NEK9-203ENST00000553945 CHRNA4P43681 627 aa23.21■■□□□ 1.31
NEK9-203ENST00000553945 GPR1P46091 355 aa23.21■■□□□ 1.31
NEK9-203ENST00000553945 KIAA1024LP59773 190 aa23.21■■□□□ 1.31
NEK9-203ENST00000553945 DPTQ07507 201 aa23.21■■□□□ 1.31
NEK9-203ENST00000553945 ALG11Q2TAA5 492 aa23.21■■□□□ 1.31
NEK9-203ENST00000553945 ZNF765Q7L2R6 523 aa23.21■■□□□ 1.31
NEK9-203ENST00000553945 RD3Q7Z3Z2 195 aa23.21■■□□□ 1.31
NEK9-203ENST00000553945 GLRX5Q86SX6 157 aa23.21■■□□□ 1.31
NEK9-203ENST00000553945 HEATR4Q86WZ0 1026 aa23.21■■□□□ 1.31
NEK9-203ENST00000553945 ZNF548Q8NEK5 533 aaPredicted RBP23.21■■□□□ 1.31
NEK9-203ENST00000553945 LMX1AQ8TE12 382 aa23.21■■□□□ 1.31
NEK9-203ENST00000553945 C1orf54Q8WWF1 131 aa23.21■■□□□ 1.31
NEK9-203ENST00000553945 SCAMP4Q969E2 229 aa23.21■■□□□ 1.31
NEK9-203ENST00000553945 RIOK2Q9BVS4 552 aaKnown RBP23.21■■□□□ 1.31
NEK9-203ENST00000553945 LGR4Q9BXB1 951 aa23.21■■□□□ 1.31
NEK9-203ENST00000553945 FSD1LQ9BXM9 530 aa23.21■■□□□ 1.31
NEK9-203ENST00000553945 FRMD8P1Q9BZ68 369 aaPredicted RBP23.21■■□□□ 1.31
NEK9-203ENST00000553945 GPR63Q9BZJ6 419 aa23.21■■□□□ 1.31
NEK9-203ENST00000553945 SLC13A1Q9BZW2 595 aa23.21■■□□□ 1.31
NEK9-203ENST00000553945 ZFYVE1Q9HBF4 777 aa23.21■■□□□ 1.31
NEK9-203ENST00000553945 PHPT1Q9NRX4 125 aaPredicted RBP23.21■■□□□ 1.31
NEK9-203ENST00000553945 PKD2L2Q9NZM6 624 aa23.21■■□□□ 1.31
NEK9-203ENST00000553945 KLQ9UEF7 1012 aa23.21■■□□□ 1.31
NEK9-203ENST00000553945 ZNF711Q9Y462 761 aa23.21■■□□□ 1.31
NEK9-203ENST00000553945 CNOT1A5YKK6 2376 aaKnown RBP23.2■■□□□ 1.3
NEK9-203ENST00000553945 TMEM202A6NGA9 273 aa23.2■■□□□ 1.3
NEK9-203ENST00000553945 ENC1O14682 589 aa23.2■■□□□ 1.3
NEK9-203ENST00000553945 LIASO43766 372 aa23.2■■□□□ 1.3
NEK9-203ENST00000553945 CEP104O60308 925 aa23.2■■□□□ 1.3
NEK9-203ENST00000553945 EPOP01588 193 aa23.2■■□□□ 1.3
NEK9-203ENST00000553945 ADRB1P08588 477 aa23.2■■□□□ 1.3
NEK9-203ENST00000553945 ATXN1LP0C7T5 689 aaKnown RBP23.2■■□□□ 1.3
NEK9-203ENST00000553945 KELP23276 732 aa23.2■■□□□ 1.3
NEK9-203ENST00000553945 SPINT3P49223 89 aa23.2■■□□□ 1.3
NEK9-203ENST00000553945 SRP54P61011 504 aaKnown RBP23.2■■□□□ 1.3
NEK9-203ENST00000553945 PRRT3Q5FWE3 981 aa23.2■■□□□ 1.3
NEK9-203ENST00000553945 ZNF569Q5MCW4 686 aa23.2■■□□□ 1.3
NEK9-203ENST00000553945 ARHGEF18Q6ZSZ5 1173 aa23.2■■□□□ 1.3
NEK9-203ENST00000553945 NYAP1Q6ZVC0 841 aa23.2■■□□□ 1.3
NEK9-203ENST00000553945 CNDP2Q96KP4 475 aaKnown RBP23.2■■□□□ 1.3
NEK9-203ENST00000553945 GORASP1Q9BQQ3 440 aa23.2■■□□□ 1.3
NEK9-203ENST00000553945 FICDQ9BVA6 458 aa23.2■■□□□ 1.3
NEK9-203ENST00000553945 TEX101Q9BY14 249 aa23.2■■□□□ 1.3
NEK9-203ENST00000553945 SPASTQ9UBP0 616 aa23.2■■□□□ 1.3
NEK9-203ENST00000553945 AAR2Q9Y312 384 aaKnown RBP23.2■■□□□ 1.3
NEK9-203ENST00000553945 SPO11Q9Y5K1 396 aa23.2■■□□□ 1.3
NEK9-203ENST00000553945 COL5A1P20908 1838 aaPredicted RBP23.19■■□□□ 1.3
NEK9-203ENST00000553945 NEMP2A6NFY4 417 aa23.19■■□□□ 1.3
NEK9-203ENST00000553945 PCNX2A6NKB5 2137 aa23.19■■□□□ 1.3
NEK9-203ENST00000553945 PDE2AO00408 941 aaPredicted RBP23.19■■□□□ 1.3
NEK9-203ENST00000553945 AQP9O43315 295 aa23.19■■□□□ 1.3
NEK9-203ENST00000553945 TNFSF14O43557 240 aa23.19■■□□□ 1.3
NEK9-203ENST00000553945 RASGRP1O95267 797 aa23.19■■□□□ 1.3
NEK9-203ENST00000553945 BLKP51451 505 aa23.19■■□□□ 1.3
NEK9-203ENST00000553945 C1orf61Q13536 156 aa23.19■■□□□ 1.3
NEK9-203ENST00000553945 SNX1Q13596 522 aa23.19■■□□□ 1.3
NEK9-203ENST00000553945 SLC1A5Q15758 541 aa23.19■■□□□ 1.3
NEK9-203ENST00000553945 HS1BP3Q53T59 392 aa23.19■■□□□ 1.3
NEK9-203ENST00000553945 RAVER1Q8IY67 606 aaKnown RBP23.19■■□□□ 1.3
NEK9-203ENST00000553945 OR56A4Q8NGH8 313 aa23.19■■□□□ 1.3
NEK9-203ENST00000553945 SRPK1Q96SB4 655 aaKnown RBP23.19■■□□□ 1.3
NEK9-203ENST00000553945 ZNF148Q9UQR1 794 aa23.19■■□□□ 1.3
NEK9-203ENST00000553945 JRKLQ9Y4A0 524 aa23.19■■□□□ 1.3
NEK9-203ENST00000553945 RGSL1A5PLK6 1076 aa23.18■■□□□ 1.3
NEK9-203ENST00000553945 TRIM38O00635 465 aa23.18■■□□□ 1.3
NEK9-203ENST00000553945 SCAMP1O15126 338 aa23.18■■□□□ 1.3
NEK9-203ENST00000553945 GCATO75600 419 aa23.18■■□□□ 1.3
NEK9-203ENST00000553945 AGTP01019 485 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms