RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 ANKRD34CP0C6C1 535 aa9.05□□□□□ -0.96
PRKCH-208ENST00000553846 SLC9A1P19634 815 aa9.05□□□□□ -0.96
PRKCH-208ENST00000553846 TEAD1P28347 426 aa9.05□□□□□ -0.96
PRKCH-208ENST00000553846 GRNP28799 593 aaKnown RBP9.05□□□□□ -0.96
PRKCH-208ENST00000553846 ADCY8P40145 1251 aa9.05□□□□□ -0.96
PRKCH-208ENST00000553846 HDAC4P56524 1084 aa9.05□□□□□ -0.96
PRKCH-208ENST00000553846 RAD51Q06609 339 aa9.05□□□□□ -0.96
PRKCH-208ENST00000553846 ILF3Q12906 894 aaKnown RBP eCLIP9.05□□□□□ -0.96
PRKCH-208ENST00000553846 RAPGEF1Q13905 1077 aa9.05□□□□□ -0.96
PRKCH-208ENST00000553846 C2CD6Q53TS8 623 aa9.05□□□□□ -0.96
PRKCH-208ENST00000553846 ERAP2Q6P179 960 aa9.05□□□□□ -0.96
PRKCH-208ENST00000553846 ZNF761Q86XN6 746 aaPredicted RBP9.05□□□□□ -0.96
PRKCH-208ENST00000553846 DNAAF5Q86Y56 855 aa9.05□□□□□ -0.96
PRKCH-208ENST00000553846 FAM71AQ8IYT1 594 aa9.05□□□□□ -0.96
PRKCH-208ENST00000553846 NRSN1Q8IZ57 195 aa9.05□□□□□ -0.96
PRKCH-208ENST00000553846 ESX1Q8N693 406 aa9.05□□□□□ -0.96
PRKCH-208ENST00000553846 CCDC185Q8N715 623 aa9.05□□□□□ -0.96
PRKCH-208ENST00000553846 RTL3Q8N8U3 475 aaKnown RBP9.05□□□□□ -0.96
PRKCH-208ENST00000553846 SLC37A2Q8TED4 501 aa9.05□□□□□ -0.96
PRKCH-208ENST00000553846 CENPIQ92674 756 aaPredicted RBP9.05□□□□□ -0.96
PRKCH-208ENST00000553846 TBC1D31Q96DN5 1066 aa9.05□□□□□ -0.96
PRKCH-208ENST00000553846 TUBGCP5Q96RT8 1024 aa9.05□□□□□ -0.96
PRKCH-208ENST00000553846 CRACR2AQ9BSW2 395 aa9.05□□□□□ -0.96
PRKCH-208ENST00000553846 DONSONQ9NYP3 566 aa9.05□□□□□ -0.96
PRKCH-208ENST00000553846 CROTQ9UKG9 612 aa9.05□□□□□ -0.96
PRKCH-208ENST00000553846 HPCAL4Q9UM19 191 aa9.05□□□□□ -0.96
PRKCH-208ENST00000553846 SUFUQ9UMX1 484 aa9.05□□□□□ -0.96
PRKCH-208ENST00000553846 PLEKHM1Q9Y4G2 1056 aa9.05□□□□□ -0.96
PRKCH-208ENST00000553846 PCYT1BQ9Y5K3 369 aaPredicted RBP9.05□□□□□ -0.96
PRKCH-208ENST00000553846 OAS3Q9Y6K5 1087 aaKnown RBP9.05□□□□□ -0.96
PRKCH-208ENST00000553846 RASA4BC9J798 803 aa9.04□□□□□ -0.96
PRKCH-208ENST00000553846 FOXN3O00409 490 aaPredicted RBP9.04□□□□□ -0.96
PRKCH-208ENST00000553846 RASA4O43374 803 aa9.04□□□□□ -0.96
PRKCH-208ENST00000553846 PLEKP08567 350 aaPredicted RBP9.04□□□□□ -0.96
PRKCH-208ENST00000553846 ELFN1P0C7U0 828 aa9.04□□□□□ -0.96
PRKCH-208ENST00000553846 GNPDA1P46926 289 aa9.04□□□□□ -0.96
PRKCH-208ENST00000553846 CSNK1DP48730 415 aa9.04□□□□□ -0.96
PRKCH-208ENST00000553846 POLD2P49005 469 aa9.04□□□□□ -0.96
PRKCH-208ENST00000553846 SNX16P57768 344 aa9.04□□□□□ -0.96
PRKCH-208ENST00000553846 CDK3Q00526 305 aa9.04□□□□□ -0.96
PRKCH-208ENST00000553846 SEMA5AQ13591 1074 aa9.04□□□□□ -0.96
PRKCH-208ENST00000553846 GRM3Q14832 879 aa9.04□□□□□ -0.96
PRKCH-208ENST00000553846 CNGA3Q16281 694 aa9.04□□□□□ -0.96
PRKCH-208ENST00000553846 C15orf59Q2T9L4 293 aaPredicted RBP9.04□□□□□ -0.96
PRKCH-208ENST00000553846 CCDC14Q49A88 953 aa9.04□□□□□ -0.96
PRKCH-208ENST00000553846 CPZQ66K79 652 aa9.04□□□□□ -0.96
PRKCH-208ENST00000553846 RWDD4Q6NW29 188 aaKnown RBP9.04□□□□□ -0.96
PRKCH-208ENST00000553846 UMODL1-AS1Q8N2C9 162 aa9.04□□□□□ -0.96
PRKCH-208ENST00000553846 EMC1Q8N766 993 aa9.04□□□□□ -0.96
PRKCH-208ENST00000553846 EFCAB3Q8N7B9 438 aa9.04□□□□□ -0.96
PRKCH-208ENST00000553846 NTAN1Q96AB6 310 aa9.04□□□□□ -0.96
PRKCH-208ENST00000553846 C18orf8Q96DM3 657 aa9.04□□□□□ -0.96
PRKCH-208ENST00000553846 FAM81BQ96LP2 452 aa9.04□□□□□ -0.96
PRKCH-208ENST00000553846 LRRC19Q9H756 370 aa9.04□□□□□ -0.96
PRKCH-208ENST00000553846 SYNCQ9H7C4 482 aa9.04□□□□□ -0.96
PRKCH-208ENST00000553846 CASS4Q9NQ75 786 aa9.04□□□□□ -0.96
PRKCH-208ENST00000553846 RCOR3Q9P2K3 495 aaPredicted RBP9.04□□□□□ -0.96
PRKCH-208ENST00000553846 PCDHGA9Q9Y5G4 932 aaKnown RBP9.04□□□□□ -0.96
PRKCH-208ENST00000553846 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.04□□□□□ -0.96
PRKCH-208ENST00000553846 DIDO1Q9BTC0 2240 aaKnown RBP9.04□□□□□ -0.96
PRKCH-208ENST00000553846 GTPBP10A4D1E9 387 aaKnown RBP9.03□□□□□ -0.96
PRKCH-208ENST00000553846 C2CD4BA6NLJ0 364 aa9.03□□□□□ -0.96
PRKCH-208ENST00000553846 ZW10O43264 779 aa9.03□□□□□ -0.96
PRKCH-208ENST00000553846 PRAMEF11O60813 436 aa9.03□□□□□ -0.96
PRKCH-208ENST00000553846 CEACAM4O75871 244 aa9.03□□□□□ -0.96
PRKCH-208ENST00000553846 LHCGRP22888 699 aa9.03□□□□□ -0.96
PRKCH-208ENST00000553846 XPAP23025 273 aaPredicted RBP9.03□□□□□ -0.96
PRKCH-208ENST00000553846 PON1P27169 355 aa9.03□□□□□ -0.96
PRKCH-208ENST00000553846 DLSTP36957 453 aa9.03□□□□□ -0.96
PRKCH-208ENST00000553846 USP8P40818 1118 aa9.03□□□□□ -0.96
PRKCH-208ENST00000553846 PTPN9P43378 593 aa9.03□□□□□ -0.96
PRKCH-208ENST00000553846 NDST2P52849 883 aa9.03□□□□□ -0.96
PRKCH-208ENST00000553846 COPB1P53618 953 aaKnown RBP9.03□□□□□ -0.96
PRKCH-208ENST00000553846 YBEYP58557 167 aaPredicted RBP9.03□□□□□ -0.96
PRKCH-208ENST00000553846 NOMO3P69849 1222 aa9.03□□□□□ -0.96
PRKCH-208ENST00000553846 KRT85P78386 507 aa9.03□□□□□ -0.96
PRKCH-208ENST00000553846 ATP11AP98196 1134 aa9.03□□□□□ -0.96
PRKCH-208ENST00000553846 PTK2Q05397 1052 aa9.03□□□□□ -0.96
PRKCH-208ENST00000553846 ERV3-1Q14264 604 aa9.03□□□□□ -0.96
PRKCH-208ENST00000553846 INPP5JQ15735 1006 aaPredicted RBP9.03□□□□□ -0.96
PRKCH-208ENST00000553846 EIF2S3LQ2VIR3 472 aaKnown RBP9.03□□□□□ -0.96
PRKCH-208ENST00000553846 KRTAP21-3Q3LHN1 58 aa9.03□□□□□ -0.96
PRKCH-208ENST00000553846 PARP15Q460N3 678 aa9.03□□□□□ -0.96
PRKCH-208ENST00000553846 PYROXD2Q8N2H3 581 aa9.03□□□□□ -0.96
PRKCH-208ENST00000553846 TSEN2Q8NCE0 465 aaKnown RBP9.03□□□□□ -0.96
PRKCH-208ENST00000553846 NELFBQ8WX92 580 aa9.03□□□□□ -0.96
PRKCH-208ENST00000553846 DTD2Q96FN9 168 aa9.03□□□□□ -0.96
PRKCH-208ENST00000553846 OGFRQ9NZT2 677 aa9.03□□□□□ -0.96
PRKCH-208ENST00000553846 B4GALT6Q9UBX8 382 aa9.03□□□□□ -0.96
PRKCH-208ENST00000553846 MAN1B1Q9UKM7 699 aa9.03□□□□□ -0.96
PRKCH-208ENST00000553846 FAM170AA1A519 330 aa9.02□□□□□ -0.97
PRKCH-208ENST00000553846 A8MU76 341 aa9.02□□□□□ -0.97
PRKCH-208ENST00000553846 GOLGA8SH3BPF8 625 aa9.02□□□□□ -0.97
PRKCH-208ENST00000553846 J3KR12 359 aa9.02□□□□□ -0.97
PRKCH-208ENST00000553846 PDE2AO00408 941 aaPredicted RBP9.02□□□□□ -0.97
PRKCH-208ENST00000553846 POLR1CO15160 346 aaPredicted RBP9.02□□□□□ -0.97
PRKCH-208ENST00000553846 TEX33O43247 280 aa9.02□□□□□ -0.97
PRKCH-208ENST00000553846 HTRA2O43464 458 aaPredicted RBP9.02□□□□□ -0.97
PRKCH-208ENST00000553846 CREG1O75629 220 aa9.02□□□□□ -0.97
PRKCH-208ENST00000553846 HEXIM1O94992 359 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms