RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 CCNYL3P0C7X3 344 aa13.77□□□□□ -0.21
PRPF39-204ENST00000553605 GM2AP17900 193 aa13.77□□□□□ -0.21
PRPF39-204ENST00000553605 ERCC5P28715 1186 aaPredicted RBP13.77□□□□□ -0.21
PRPF39-204ENST00000553605 CASP14P31944 242 aa13.77□□□□□ -0.21
PRPF39-204ENST00000553605 MANEALQ5VSG8 457 aa13.77□□□□□ -0.21
PRPF39-204ENST00000553605 AFMIDQ63HM1 303 aa13.77□□□□□ -0.21
PRPF39-204ENST00000553605 ENOSF1Q7L5Y1 443 aa13.77□□□□□ -0.21
PRPF39-204ENST00000553605 CAMK1DQ8IU85 385 aa13.77□□□□□ -0.21
PRPF39-204ENST00000553605 SLC37A2Q8TED4 501 aa13.77□□□□□ -0.21
PRPF39-204ENST00000553605 PTCD2Q8WV60 388 aaKnown RBP13.77□□□□□ -0.21
PRPF39-204ENST00000553605 THAP4Q8WY91 577 aa13.77□□□□□ -0.21
PRPF39-204ENST00000553605 C19orf60Q96EN9 201 aa13.77□□□□□ -0.21
PRPF39-204ENST00000553605 TEX101Q9BY14 249 aa13.77□□□□□ -0.21
PRPF39-204ENST00000553605 MFRPQ9BY79 579 aa13.77□□□□□ -0.21
PRPF39-204ENST00000553605 FRMD8Q9BZ67 464 aaPredicted RBP13.77□□□□□ -0.21
PRPF39-204ENST00000553605 ACSS2Q9NR19 701 aa13.77□□□□□ -0.21
PRPF39-204ENST00000553605 SIDT1Q9NXL6 827 aaKnown RBP13.77□□□□□ -0.21
PRPF39-204ENST00000553605 LHX3Q9UBR4 397 aa13.77□□□□□ -0.21
PRPF39-204ENST00000553605 ZNF451Q9Y4E5 1061 aa13.77□□□□□ -0.21
PRPF39-204ENST00000553605 PLEKHM1Q9Y4G2 1056 aa13.77□□□□□ -0.21
PRPF39-204ENST00000553605 DPM1O60762 260 aa13.76□□□□□ -0.21
PRPF39-204ENST00000553605 F13A1P00488 732 aa13.76□□□□□ -0.21
PRPF39-204ENST00000553605 ZSCAN22P10073 491 aaPredicted RBP13.76□□□□□ -0.21
PRPF39-204ENST00000553605 NFKBIAP25963 317 aa13.76□□□□□ -0.21
PRPF39-204ENST00000553605 POLD2P49005 469 aa13.76□□□□□ -0.21
PRPF39-204ENST00000553605 NRG1Q02297 640 aaPredicted RBP13.76□□□□□ -0.21
PRPF39-204ENST00000553605 CHAF1BQ13112 559 aa13.76□□□□□ -0.21
PRPF39-204ENST00000553605 DNASE1L3Q13609 305 aa13.76□□□□□ -0.21
PRPF39-204ENST00000553605 ACOX1Q15067 660 aa13.76□□□□□ -0.21
PRPF39-204ENST00000553605 CYTH1Q15438 398 aa13.76□□□□□ -0.21
PRPF39-204ENST00000553605 CHRNA6Q15825 494 aa13.76□□□□□ -0.21
PRPF39-204ENST00000553605 COBLL1Q53SF7 1204 aa13.76□□□□□ -0.21
PRPF39-204ENST00000553605 ZNF658Q5TYW1 1059 aaPredicted RBP13.76□□□□□ -0.21
PRPF39-204ENST00000553605 CPZQ66K79 652 aa13.76□□□□□ -0.21
PRPF39-204ENST00000553605 SP5Q6BEB4 398 aaPredicted RBP13.76□□□□□ -0.21
PRPF39-204ENST00000553605 BNIPLQ7Z465 357 aa13.76□□□□□ -0.21
PRPF39-204ENST00000553605 MCEMP1Q8IX19 187 aa13.76□□□□□ -0.21
PRPF39-204ENST00000553605 CEP63Q96MT8 703 aa13.76□□□□□ -0.21
PRPF39-204ENST00000553605 KLC2Q9H0B6 622 aa13.76□□□□□ -0.21
PRPF39-204ENST00000553605 PADI1Q9ULC6 663 aa13.76□□□□□ -0.21
PRPF39-204ENST00000553605 PCDHGB7Q9Y5F8 929 aa13.76□□□□□ -0.21
PRPF39-204ENST00000553605 HIVEP1P15822 2718 aa13.75□□□□□ -0.21
PRPF39-204ENST00000553605 FAM237AA0A1B0GTK4 181 aa13.75□□□□□ -0.21
PRPF39-204ENST00000553605 A8MX80 341 aa13.75□□□□□ -0.21
PRPF39-204ENST00000553605 FAM72CH0Y354 149 aa13.75□□□□□ -0.21
PRPF39-204ENST00000553605 KIAA0754O94854 1291 aa13.75□□□□□ -0.21
PRPF39-204ENST00000553605 NDUFA10O95299 355 aa13.75□□□□□ -0.21
PRPF39-204ENST00000553605 IVLP07476 585 aa13.75□□□□□ -0.21
PRPF39-204ENST00000553605 KRT9P35527 623 aa13.75□□□□□ -0.21
PRPF39-204ENST00000553605 FLT3P36888 993 aa13.75□□□□□ -0.21
PRPF39-204ENST00000553605 GARSP41250 739 aaKnown RBP13.75□□□□□ -0.21
PRPF39-204ENST00000553605 NDST2P52849 883 aa13.75□□□□□ -0.21
PRPF39-204ENST00000553605 ZXDCQ2QGD7 858 aaPredicted RBP13.75□□□□□ -0.21
PRPF39-204ENST00000553605 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.75□□□□□ -0.21
PRPF39-204ENST00000553605 FAM102AQ5T9C2 384 aaPredicted RBP13.75□□□□□ -0.21
PRPF39-204ENST00000553605 FAM72AQ5TYM5 149 aa13.75□□□□□ -0.21
PRPF39-204ENST00000553605 SLC6A19Q695T7 634 aa13.75□□□□□ -0.21
PRPF39-204ENST00000553605 FAM72DQ6L9T8 149 aa13.75□□□□□ -0.21
PRPF39-204ENST00000553605 FAM72BQ86X60 149 aa13.75□□□□□ -0.21
PRPF39-204ENST00000553605 RASGRP3Q8IV61 690 aa13.75□□□□□ -0.21
PRPF39-204ENST00000553605 SFRP1Q8N474 314 aa13.75□□□□□ -0.21
PRPF39-204ENST00000553605 SEC14L1Q92503 715 aa13.75□□□□□ -0.21
PRPF39-204ENST00000553605 PNPLA2Q96AD5 504 aa13.75□□□□□ -0.21
PRPF39-204ENST00000553605 SNRNP40Q96DI7 357 aaKnown RBP13.75□□□□□ -0.21
PRPF39-204ENST00000553605 CFAP57Q96MR6 1250 aa13.75□□□□□ -0.21
PRPF39-204ENST00000553605 TUBGCP5Q96RT8 1024 aa13.75□□□□□ -0.21
PRPF39-204ENST00000553605 ING2Q9H160 280 aa13.75□□□□□ -0.21
PRPF39-204ENST00000553605 ACTL8Q9H568 366 aa13.75□□□□□ -0.21
PRPF39-204ENST00000553605 RUBCNLQ9H714 662 aa13.75□□□□□ -0.21
PRPF39-204ENST00000553605 RMND1Q9NWS8 449 aa13.75□□□□□ -0.21
PRPF39-204ENST00000553605 SLC17A4Q9Y2C5 497 aa13.75□□□□□ -0.21
PRPF39-204ENST00000553605 ANKUB1A6NFN9 424 aa13.74□□□□□ -0.21
PRPF39-204ENST00000553605 ARGFXA6NJG6 315 aa13.74□□□□□ -0.21
PRPF39-204ENST00000553605 C21orf140B9A014 251 aa13.74□□□□□ -0.21
PRPF39-204ENST00000553605 LRIG2O94898 1065 aa13.74□□□□□ -0.21
PRPF39-204ENST00000553605 MAP3K6O95382 1288 aa13.74□□□□□ -0.21
PRPF39-204ENST00000553605 ADRA1BP35368 520 aa13.74□□□□□ -0.21
PRPF39-204ENST00000553605 SCNN1AP37088 669 aa13.74□□□□□ -0.21
PRPF39-204ENST00000553605 MAPK9P45984 424 aa13.74□□□□□ -0.21
PRPF39-204ENST00000553605 CDK3Q00526 305 aa13.74□□□□□ -0.21
PRPF39-204ENST00000553605 HHEXQ03014 270 aa13.74□□□□□ -0.21
PRPF39-204ENST00000553605 NFATC2Q13469 925 aa13.74□□□□□ -0.21
PRPF39-204ENST00000553605 ELOAQ14241 798 aaKnown RBP13.74□□□□□ -0.21
PRPF39-204ENST00000553605 UGT8Q16880 541 aa13.74□□□□□ -0.21
PRPF39-204ENST00000553605 TRNP1Q6NT89 227 aa13.74□□□□□ -0.21
PRPF39-204ENST00000553605 GJB7Q6PEY0 223 aa13.74□□□□□ -0.21
PRPF39-204ENST00000553605 DPPA4Q7L190 304 aa13.74□□□□□ -0.21
PRPF39-204ENST00000553605 PHLDB2Q86SQ0 1253 aa13.74□□□□□ -0.21
PRPF39-204ENST00000553605 CT55Q8WUE5 264 aa13.74□□□□□ -0.21
PRPF39-204ENST00000553605 C18orf8Q96DM3 657 aa13.74□□□□□ -0.21
PRPF39-204ENST00000553605 TBC1D31Q96DN5 1066 aa13.74□□□□□ -0.21
PRPF39-204ENST00000553605 NUS1Q96E22 293 aa13.74□□□□□ -0.21
PRPF39-204ENST00000553605 ELMO2Q96JJ3 720 aa13.74□□□□□ -0.21
PRPF39-204ENST00000553605 OR6C1Q96RD1 312 aa13.74□□□□□ -0.21
PRPF39-204ENST00000553605 MAGEB5Q9BZ81 275 aa13.74□□□□□ -0.21
PRPF39-204ENST00000553605 NOL6Q9H6R4 1146 aaKnown RBP13.74□□□□□ -0.21
PRPF39-204ENST00000553605 PLCB1Q9NQ66 1216 aa13.74□□□□□ -0.21
PRPF39-204ENST00000553605 LHX9Q9NQ69 397 aa13.74□□□□□ -0.21
PRPF39-204ENST00000553605 ASF1BQ9NVP2 202 aa13.74□□□□□ -0.21
PRPF39-204ENST00000553605 NEU3Q9UQ49 428 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms