RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 FBXO24O75426 580 aa7.35□□□□□ -1.23
ATXN3-219ENST00000553488 UGT2B4P06133 528 aa7.35□□□□□ -1.23
ATXN3-219ENST00000553488 JMJD7P0C870 316 aa7.35□□□□□ -1.23
ATXN3-219ENST00000553488 FOSL1P15407 271 aa7.35□□□□□ -1.23
ATXN3-219ENST00000553488 RAB6AP20340 208 aa7.35□□□□□ -1.23
ATXN3-219ENST00000553488 OR1E1P30953 314 aa7.35□□□□□ -1.23
ATXN3-219ENST00000553488 EIF4A3P38919 411 aaKnown RBP7.35□□□□□ -1.23
ATXN3-219ENST00000553488 HK3P52790 923 aa7.35□□□□□ -1.23
ATXN3-219ENST00000553488 PPARDQ03181 441 aa7.35□□□□□ -1.23
ATXN3-219ENST00000553488 MORC3Q14149 939 aa7.35□□□□□ -1.23
ATXN3-219ENST00000553488 IRF4Q15306 451 aa7.35□□□□□ -1.23
ATXN3-219ENST00000553488 ELOCQ15369 112 aa7.35□□□□□ -1.23
ATXN3-219ENST00000553488 TCEA2Q15560 299 aa7.35□□□□□ -1.23
ATXN3-219ENST00000553488 ALG11Q2TAA5 492 aa7.35□□□□□ -1.23
ATXN3-219ENST00000553488 CCDC40Q4G0X9 1142 aa7.35□□□□□ -1.23
ATXN3-219ENST00000553488 ZNF805Q5CZA5 627 aa7.35□□□□□ -1.23
ATXN3-219ENST00000553488 LRRC73Q5JTD7 316 aa7.35□□□□□ -1.23
ATXN3-219ENST00000553488 CERCAMQ5T4B2 595 aa7.35□□□□□ -1.23
ATXN3-219ENST00000553488 TTI2Q6NXR4 508 aa7.35□□□□□ -1.23
ATXN3-219ENST00000553488 LVRNQ6Q4G3 990 aa7.35□□□□□ -1.23
ATXN3-219ENST00000553488 C11orf57Q6ZUT1 292 aaPredicted RBP7.35□□□□□ -1.23
ATXN3-219ENST00000553488 SPRED1Q7Z699 444 aa7.35□□□□□ -1.23
ATXN3-219ENST00000553488 PASD1Q8IV76 773 aa7.35□□□□□ -1.23
ATXN3-219ENST00000553488 SFTPA2Q8IWL1 248 aa7.35□□□□□ -1.23
ATXN3-219ENST00000553488 C1orf131Q8NDD1 294 aaKnown RBP7.35□□□□□ -1.23
ATXN3-219ENST00000553488 GPR156Q8NFN8 814 aa7.35□□□□□ -1.23
ATXN3-219ENST00000553488 ARHGEF2Q92974 986 aaKnown RBP7.35□□□□□ -1.23
ATXN3-219ENST00000553488 ISG20Q96AZ6 181 aaKnown RBP7.35□□□□□ -1.23
ATXN3-219ENST00000553488 C1orf74Q96LT6 269 aa7.35□□□□□ -1.23
ATXN3-219ENST00000553488 TMEM74Q96NL1 305 aa7.35□□□□□ -1.23
ATXN3-219ENST00000553488 GSDMAQ96QA5 445 aa7.35□□□□□ -1.23
ATXN3-219ENST00000553488 SLC12A9Q9BXP2 914 aa7.35□□□□□ -1.23
ATXN3-219ENST00000553488 EDEM3Q9BZQ6 932 aa7.35□□□□□ -1.23
ATXN3-219ENST00000553488 ADNPQ9H2P0 1102 aa7.35□□□□□ -1.23
ATXN3-219ENST00000553488 LRRN3Q9H3W5 708 aa7.35□□□□□ -1.23
ATXN3-219ENST00000553488 ATP13A1Q9HD20 1204 aa7.35□□□□□ -1.23
ATXN3-219ENST00000553488 SEPT10Q9P0V9 454 aa7.35□□□□□ -1.23
ATXN3-219ENST00000553488 HECAQ9UBI9 543 aaPredicted RBP7.35□□□□□ -1.23
ATXN3-219ENST00000553488 APPL1Q9UKG1 709 aa7.35□□□□□ -1.23
ATXN3-219ENST00000553488 NEU3Q9UQ49 428 aa7.35□□□□□ -1.23
ATXN3-219ENST00000553488 GSRP00390 522 aa7.34□□□□□ -1.23
ATXN3-219ENST00000553488 CELA3AP09093 270 aa7.34□□□□□ -1.23
ATXN3-219ENST00000553488 ALPIP09923 528 aa7.34□□□□□ -1.23
ATXN3-219ENST00000553488 CD82P27701 267 aa7.34□□□□□ -1.23
ATXN3-219ENST00000553488 NTF4P34130 210 aa7.34□□□□□ -1.23
ATXN3-219ENST00000553488 ACVRL1P37023 503 aa7.34□□□□□ -1.23
ATXN3-219ENST00000553488 SULT1E1P49888 294 aa7.34□□□□□ -1.23
ATXN3-219ENST00000553488 PEX5P50542 639 aa7.34□□□□□ -1.23
ATXN3-219ENST00000553488 DNA2P51530 1060 aa7.34□□□□□ -1.23
ATXN3-219ENST00000553488 SLC6A3Q01959 620 aa7.34□□□□□ -1.23
ATXN3-219ENST00000553488 GNA12Q03113 381 aa7.34□□□□□ -1.23
ATXN3-219ENST00000553488 SLC20A2Q08357 652 aa7.34□□□□□ -1.23
ATXN3-219ENST00000553488 CETN1Q12798 172 aa7.34□□□□□ -1.23
ATXN3-219ENST00000553488 NFATC4Q14934 902 aa7.34□□□□□ -1.23
ATXN3-219ENST00000553488 C16orf72Q14CZ0 275 aa7.34□□□□□ -1.23
ATXN3-219ENST00000553488 SKIDA1Q1XH10 827 aa7.34□□□□□ -1.23
ATXN3-219ENST00000553488 FAXCQ5TGI0 409 aa7.34□□□□□ -1.23
ATXN3-219ENST00000553488 MANEALQ5VSG8 457 aa7.34□□□□□ -1.23
ATXN3-219ENST00000553488 TRNP1Q6NT89 227 aa7.34□□□□□ -1.23
ATXN3-219ENST00000553488 GJB7Q6PEY0 223 aa7.34□□□□□ -1.23
ATXN3-219ENST00000553488 TRIM65Q6PJ69 517 aa7.34□□□□□ -1.23
ATXN3-219ENST00000553488 FOXR2Q6PJQ5 311 aa7.34□□□□□ -1.23
ATXN3-219ENST00000553488 OR6C4Q8NGE1 309 aa7.34□□□□□ -1.23
ATXN3-219ENST00000553488 OR2AP1Q8NGE2 309 aa7.34□□□□□ -1.23
ATXN3-219ENST00000553488 SHC3Q92529 594 aa7.34□□□□□ -1.23
ATXN3-219ENST00000553488 USP7Q93009 1102 aa7.34□□□□□ -1.23
ATXN3-219ENST00000553488 TMEM159Q96B96 161 aa7.34□□□□□ -1.23
ATXN3-219ENST00000553488 ARHGEF26Q96DR7 871 aa7.34□□□□□ -1.23
ATXN3-219ENST00000553488 PDXPQ96GD0 296 aa7.34□□□□□ -1.23
ATXN3-219ENST00000553488 PSMG3-AS1Q96PY0 264 aa7.34□□□□□ -1.23
ATXN3-219ENST00000553488 RBM15Q96T37 977 aaKnown RBP eCLIP7.34□□□□□ -1.23
ATXN3-219ENST00000553488 TBCBQ99426 244 aa7.34□□□□□ -1.23
ATXN3-219ENST00000553488 SPON2Q9BUD6 331 aa7.34□□□□□ -1.23
ATXN3-219ENST00000553488 OSBPL1AQ9BXW6 950 aa7.34□□□□□ -1.23
ATXN3-219ENST00000553488 GTPBP4Q9BZE4 634 aaKnown RBP7.34□□□□□ -1.23
ATXN3-219ENST00000553488 B3GNT4Q9C0J1 378 aa7.34□□□□□ -1.23
ATXN3-219ENST00000553488 WDCPQ9H6R7 721 aa7.34□□□□□ -1.23
ATXN3-219ENST00000553488 UBE2TQ9NPD8 197 aaPredicted RBP7.34□□□□□ -1.23
ATXN3-219ENST00000553488 RRN3Q9NYV6 651 aa7.34□□□□□ -1.23
ATXN3-219ENST00000553488 GULP1Q9UBP9 304 aa7.34□□□□□ -1.23
ATXN3-219ENST00000553488 AJAP1Q9UKB5 411 aaPredicted RBP7.34□□□□□ -1.23
ATXN3-219ENST00000553488 GPR34Q9UPC5 381 aa7.34□□□□□ -1.23
ATXN3-219ENST00000553488 MAN2B2Q9Y2E5 1009 aa7.34□□□□□ -1.23
ATXN3-219ENST00000553488 AKAP9Q99996 3911 aa7.34□□□□□ -1.23
ATXN3-219ENST00000553488 AGRPO00253 132 aa7.33□□□□□ -1.24
ATXN3-219ENST00000553488 NEMP1O14524 444 aa7.33□□□□□ -1.24
ATXN3-219ENST00000553488 PSMA7O14818 248 aa7.33□□□□□ -1.24
ATXN3-219ENST00000553488 TM7SF2O76062 418 aa7.33□□□□□ -1.24
ATXN3-219ENST00000553488 RASGRP1O95267 797 aa7.33□□□□□ -1.24
ATXN3-219ENST00000553488 PNLIPP16233 465 aa7.33□□□□□ -1.24
ATXN3-219ENST00000553488 ITIH2P19823 946 aa7.33□□□□□ -1.24
ATXN3-219ENST00000553488 FLT3P36888 993 aa7.33□□□□□ -1.24
ATXN3-219ENST00000553488 CASRP41180 1078 aa7.33□□□□□ -1.24
ATXN3-219ENST00000553488 BLKP51451 505 aa7.33□□□□□ -1.24
ATXN3-219ENST00000553488 MAPK10P53779 464 aa7.33□□□□□ -1.24
ATXN3-219ENST00000553488 POLE2P56282 527 aa7.33□□□□□ -1.24
ATXN3-219ENST00000553488 APBA1Q02410 837 aa7.33□□□□□ -1.24
ATXN3-219ENST00000553488 DEUP1Q05D60 604 aa7.33□□□□□ -1.24
ATXN3-219ENST00000553488 KCNAB2Q13303 367 aa7.33□□□□□ -1.24
ATXN3-219ENST00000553488 HLTFQ14527 1009 aaKnown RBP eCLIP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms