RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 CHKBQ9Y259 395 aa12.94□□□□□ -0.34
ACTN1-207ENST00000553290 PCDHB1Q9Y5F3 818 aa12.94□□□□□ -0.34
ACTN1-207ENST00000553290 FAM208BQ5VWN6 2430 aa12.94□□□□□ -0.34
ACTN1-207ENST00000553290 NBEAQ8NFP9 2946 aa12.94□□□□□ -0.34
ACTN1-207ENST00000553290 ADAMTS20P59510 1910 aa12.94□□□□□ -0.34
ACTN1-207ENST00000553290 A0A087WV48 116 aa12.93□□□□□ -0.34
ACTN1-207ENST00000553290 GOLGA6CA6NDK9 693 aa12.93□□□□□ -0.34
ACTN1-207ENST00000553290 GOLGA6BA6NDN3 693 aa12.93□□□□□ -0.34
ACTN1-207ENST00000553290 CAPN8A6NHC0 703 aa12.93□□□□□ -0.34
ACTN1-207ENST00000553290 KCNK1O00180 336 aa12.93□□□□□ -0.34
ACTN1-207ENST00000553290 PPP1R12AO14974 1030 aaPredicted RBP12.93□□□□□ -0.34
ACTN1-207ENST00000553290 PSTPIP1O43586 416 aa12.93□□□□□ -0.34
ACTN1-207ENST00000553290 BRINP1O60477 761 aa12.93□□□□□ -0.34
ACTN1-207ENST00000553290 USP12O75317 370 aa12.93□□□□□ -0.34
ACTN1-207ENST00000553290 PRLP01236 227 aa12.93□□□□□ -0.34
ACTN1-207ENST00000553290 PYGLP06737 847 aa12.93□□□□□ -0.34
ACTN1-207ENST00000553290 GOLGA6DP0CG33 693 aa12.93□□□□□ -0.34
ACTN1-207ENST00000553290 TNNT1P13805 278 aa12.93□□□□□ -0.34
ACTN1-207ENST00000553290 ACTN2P35609 894 aa12.93□□□□□ -0.34
ACTN1-207ENST00000553290 CYLC1P35663 651 aaPredicted RBP12.93□□□□□ -0.34
ACTN1-207ENST00000553290 AP1B1Q10567 949 aa12.93□□□□□ -0.34
ACTN1-207ENST00000553290 TFDP2Q14188 446 aa12.93□□□□□ -0.34
ACTN1-207ENST00000553290 PTPRRQ15256 657 aa12.93□□□□□ -0.34
ACTN1-207ENST00000553290 SPA17Q15506 151 aa12.93□□□□□ -0.34
ACTN1-207ENST00000553290 ISXQ2M1V0 245 aa12.93□□□□□ -0.34
ACTN1-207ENST00000553290 KCTD16Q68DU8 428 aa12.93□□□□□ -0.34
ACTN1-207ENST00000553290 RAET1GQ6H3X3 334 aa12.93□□□□□ -0.34
ACTN1-207ENST00000553290 OGFOD3Q6PK18 319 aa12.93□□□□□ -0.34
ACTN1-207ENST00000553290 ZNF765Q7L2R6 523 aa12.93□□□□□ -0.34
ACTN1-207ENST00000553290 NRSN1Q8IZ57 195 aa12.93□□□□□ -0.34
ACTN1-207ENST00000553290 LSMEM2Q8N112 164 aa12.93□□□□□ -0.34
ACTN1-207ENST00000553290 FAM46DQ8NEK8 389 aa12.93□□□□□ -0.34
ACTN1-207ENST00000553290 GPR156Q8NFN8 814 aa12.93□□□□□ -0.34
ACTN1-207ENST00000553290 FGF11Q92914 225 aa12.93□□□□□ -0.34
ACTN1-207ENST00000553290 RNF25Q96BH1 459 aaPredicted RBP12.93□□□□□ -0.34
ACTN1-207ENST00000553290 AP2M1Q96CW1 435 aa12.93□□□□□ -0.34
ACTN1-207ENST00000553290 OLFM3Q96PB7 478 aa12.93□□□□□ -0.34
ACTN1-207ENST00000553290 LYSMD1Q96S90 227 aa12.93□□□□□ -0.34
ACTN1-207ENST00000553290 FRMD8Q9BZ67 464 aaPredicted RBP12.93□□□□□ -0.34
ACTN1-207ENST00000553290 TMEM168Q9H0V1 697 aa12.93□□□□□ -0.34
ACTN1-207ENST00000553290 ABCG8Q9H221 673 aa12.93□□□□□ -0.34
ACTN1-207ENST00000553290 GOLGA6AQ9NYA3 693 aa12.93□□□□□ -0.34
ACTN1-207ENST00000553290 HYOU1Q9Y4L1 999 aa12.93□□□□□ -0.34
ACTN1-207ENST00000553290 LAMA5O15230 3695 aa12.92□□□□□ -0.34
ACTN1-207ENST00000553290 CELSR3Q9NYQ7 3312 aa12.92□□□□□ -0.34
ACTN1-207ENST00000553290 A0A0A6YYK5 440 aaPredicted RBP12.92□□□□□ -0.34
ACTN1-207ENST00000553290 RRP8O43159 456 aaKnown RBP12.92□□□□□ -0.34
ACTN1-207ENST00000553290 TLX3O43711 291 aaPredicted RBP12.92□□□□□ -0.34
ACTN1-207ENST00000553290 CEACAM5P06731 702 aa12.92□□□□□ -0.34
ACTN1-207ENST00000553290 MMP2P08253 660 aa12.92□□□□□ -0.34
ACTN1-207ENST00000553290 EIF2S3P41091 472 aaKnown RBP12.92□□□□□ -0.34
ACTN1-207ENST00000553290 CD86P42081 329 aa12.92□□□□□ -0.34
ACTN1-207ENST00000553290 CDKN2BP42772 138 aa12.92□□□□□ -0.34
ACTN1-207ENST00000553290 GPR1P46091 355 aa12.92□□□□□ -0.34
ACTN1-207ENST00000553290 LSSP48449 732 aa12.92□□□□□ -0.34
ACTN1-207ENST00000553290 NR2C2P49116 596 aa12.92□□□□□ -0.34
ACTN1-207ENST00000553290 STC1P52823 247 aa12.92□□□□□ -0.34
ACTN1-207ENST00000553290 SKOR1P84550 965 aa12.92□□□□□ -0.34
ACTN1-207ENST00000553290 ZBTB17Q13105 803 aa12.92□□□□□ -0.34
ACTN1-207ENST00000553290 PEX6Q13608 980 aa12.92□□□□□ -0.34
ACTN1-207ENST00000553290 SPIDRQ14159 915 aa12.92□□□□□ -0.34
ACTN1-207ENST00000553290 ITPR1Q14643 2758 aa12.92□□□□□ -0.34
ACTN1-207ENST00000553290 C19orf48Q6RUI8 117 aa12.92□□□□□ -0.34
ACTN1-207ENST00000553290 MFSD7Q6UXD7 560 aa12.92□□□□□ -0.34
ACTN1-207ENST00000553290 ADAMTSL4Q6UY14 1074 aa12.92□□□□□ -0.34
ACTN1-207ENST00000553290 CNTD1Q8N815 330 aa12.92□□□□□ -0.34
ACTN1-207ENST00000553290 LPCAT1Q8NF37 534 aa12.92□□□□□ -0.34
ACTN1-207ENST00000553290 SNIP1Q8TAD8 396 aaKnown RBP12.92□□□□□ -0.34
ACTN1-207ENST00000553290 GPBAR1Q8TDU6 330 aa12.92□□□□□ -0.34
ACTN1-207ENST00000553290 HNRNPLLQ8WVV9 542 aaKnown RBP12.92□□□□□ -0.34
ACTN1-207ENST00000553290 CCDC74AQ96AQ1 378 aa12.92□□□□□ -0.34
ACTN1-207ENST00000553290 MRFAP1L1Q96HT8 127 aa12.92□□□□□ -0.34
ACTN1-207ENST00000553290 DCBLD2Q96PD2 775 aa12.92□□□□□ -0.34
ACTN1-207ENST00000553290 MLPHQ9BV36 600 aaPredicted RBP12.92□□□□□ -0.34
ACTN1-207ENST00000553290 ADGRE3Q9BY15 652 aa12.92□□□□□ -0.34
ACTN1-207ENST00000553290 GSDMCQ9BYG8 508 aa12.92□□□□□ -0.34
ACTN1-207ENST00000553290 POLR1BQ9H9Y6 1135 aa12.92□□□□□ -0.34
ACTN1-207ENST00000553290 CARS2Q9HA77 564 aaKnown RBP12.92□□□□□ -0.34
ACTN1-207ENST00000553290 TRNAU1APQ9NX07 287 aaKnown RBP12.92□□□□□ -0.34
ACTN1-207ENST00000553290 CD84Q9UIB8 345 aa12.92□□□□□ -0.34
ACTN1-207ENST00000553290 SLC17A4Q9Y2C5 497 aa12.92□□□□□ -0.34
ACTN1-207ENST00000553290 PCDHA13Q9Y5I0 950 aa12.92□□□□□ -0.34
ACTN1-207ENST00000553290 ALG6Q9Y672 507 aa12.92□□□□□ -0.34
ACTN1-207ENST00000553290 COL27A1Q8IZC6 1860 aaPredicted RBP12.91□□□□□ -0.34
ACTN1-207ENST00000553290 A0A0U1RQS6 177 aa12.91□□□□□ -0.34
ACTN1-207ENST00000553290 ANKRD66B4E2M5 251 aa12.91□□□□□ -0.34
ACTN1-207ENST00000553290 NTN3O00634 580 aaPredicted RBP12.91□□□□□ -0.34
ACTN1-207ENST00000553290 DXOO77932 396 aaKnown RBP12.91□□□□□ -0.34
ACTN1-207ENST00000553290 CLDN7O95471 211 aa12.91□□□□□ -0.34
ACTN1-207ENST00000553290 IVLP07476 585 aa12.91□□□□□ -0.34
ACTN1-207ENST00000553290 GLB1P16278 677 aa12.91□□□□□ -0.34
ACTN1-207ENST00000553290 ZNF75DP51815 510 aa12.91□□□□□ -0.34
ACTN1-207ENST00000553290 DYNLT1P63172 113 aa12.91□□□□□ -0.34
ACTN1-207ENST00000553290 GABREP78334 506 aa12.91□□□□□ -0.34
ACTN1-207ENST00000553290 ILF3Q12906 894 aaKnown RBP eCLIP12.91□□□□□ -0.34
ACTN1-207ENST00000553290 SLC14A2Q15849 920 aa12.91□□□□□ -0.34
ACTN1-207ENST00000553290 TAZQ16635 292 aa12.91□□□□□ -0.34
ACTN1-207ENST00000553290 COL28A1Q2UY09 1125 aa12.91□□□□□ -0.34
ACTN1-207ENST00000553290 TBC1D25Q3MII6 688 aa12.91□□□□□ -0.34
ACTN1-207ENST00000553290 NPNTQ6UXI9 565 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms