RNA–Protein interactions for RNA: ENST00000552713.5

CDK4-213, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-213ENST00000552713 ECHDC3Q96DC8 303 aa8.47□□□□□ -1.05
CDK4-213ENST00000552713 COQ10AQ96MF6 247 aa8.47□□□□□ -1.05
CDK4-213ENST00000552713 TIGD1Q96MW7 591 aa8.47□□□□□ -1.05
CDK4-213ENST00000552713 ZNF641Q96N77 438 aaPredicted RBP8.47□□□□□ -1.05
CDK4-213ENST00000552713 GSDMCQ9BYG8 508 aa8.47□□□□□ -1.05
CDK4-213ENST00000552713 FRMD8Q9BZ67 464 aaPredicted RBP8.47□□□□□ -1.05
CDK4-213ENST00000552713 PDCL3Q9H2J4 239 aa8.47□□□□□ -1.05
CDK4-213ENST00000552713 RETREG1Q9H6L5 497 aa8.47□□□□□ -1.05
CDK4-213ENST00000552713 PRDM8Q9NQV8 689 aa8.47□□□□□ -1.05
CDK4-213ENST00000552713 PDP2Q9P2J9 529 aa8.47□□□□□ -1.05
CDK4-213ENST00000552713 TMEM184BQ9Y519 407 aaPredicted RBP8.47□□□□□ -1.05
CDK4-213ENST00000552713 PIKFYVEQ9Y2I7 2098 aa8.47□□□□□ -1.05
CDK4-213ENST00000552713 A0A0U1RQS6 177 aa8.46□□□□□ -1.06
CDK4-213ENST00000552713 TTC24A2A3L6 582 aaPredicted RBP8.46□□□□□ -1.06
CDK4-213ENST00000552713 CFAP69A5D8W1 941 aa8.46□□□□□ -1.06
CDK4-213ENST00000552713 C2CD4BA6NLJ0 364 aa8.46□□□□□ -1.06
CDK4-213ENST00000552713 TRAFD1O14545 582 aaPredicted RBP8.46□□□□□ -1.06
CDK4-213ENST00000552713 DNAJB5O75953 348 aa8.46□□□□□ -1.06
CDK4-213ENST00000552713 ZNF28P17035 718 aa8.46□□□□□ -1.06
CDK4-213ENST00000552713 EPHB2P29323 1055 aa8.46□□□□□ -1.06
CDK4-213ENST00000552713 ADCY8P40145 1251 aa8.46□□□□□ -1.06
CDK4-213ENST00000552713 PPP1R2P41236 205 aa8.46□□□□□ -1.06
CDK4-213ENST00000552713 STAT5AP42229 794 aa8.46□□□□□ -1.06
CDK4-213ENST00000552713 RAB15P59190 212 aa8.46□□□□□ -1.06
CDK4-213ENST00000552713 CDK3Q00526 305 aa8.46□□□□□ -1.06
CDK4-213ENST00000552713 ILF3Q12906 894 aaKnown RBP eCLIP8.46□□□□□ -1.06
CDK4-213ENST00000552713 ERV3-1Q14264 604 aa8.46□□□□□ -1.06
CDK4-213ENST00000552713 TSR1Q2NL82 804 aaKnown RBP8.46□□□□□ -1.06
CDK4-213ENST00000552713 CFAP58Q5T655 872 aa8.46□□□□□ -1.06
CDK4-213ENST00000552713 ARCQ7LC44 396 aa8.46□□□□□ -1.06
CDK4-213ENST00000552713 KDELC2Q7Z4H8 507 aa8.46□□□□□ -1.06
CDK4-213ENST00000552713 SRLQ86TD4 932 aa8.46□□□□□ -1.06
CDK4-213ENST00000552713 ZGRF1Q86YA3 2104 aa8.46□□□□□ -1.06
CDK4-213ENST00000552713 FNIP1Q8TF40 1166 aa8.46□□□□□ -1.06
CDK4-213ENST00000552713 SLC20A1Q8WUM9 679 aa8.46□□□□□ -1.06
CDK4-213ENST00000552713 CENPIQ92674 756 aaPredicted RBP8.46□□□□□ -1.06
CDK4-213ENST00000552713 CELF6Q96J87 481 aaKnown RBP8.46□□□□□ -1.06
CDK4-213ENST00000552713 TEX101Q9BY14 249 aa8.46□□□□□ -1.06
CDK4-213ENST00000552713 TMEM51Q9NW97 253 aa8.46□□□□□ -1.06
CDK4-213ENST00000552713 TRNAU1APQ9NX07 287 aaKnown RBP8.46□□□□□ -1.06
CDK4-213ENST00000552713 UBA2Q9UBT2 640 aaPredicted RBP8.46□□□□□ -1.06
CDK4-213ENST00000552713 B4GALT6Q9UBX8 382 aa8.46□□□□□ -1.06
CDK4-213ENST00000552713 TLK1Q9UKI8 766 aa8.46□□□□□ -1.06
CDK4-213ENST00000552713 PCYT1BQ9Y5K3 369 aaPredicted RBP8.46□□□□□ -1.06
CDK4-213ENST00000552713 FHOD1Q9Y613 1164 aa8.46□□□□□ -1.06
CDK4-213ENST00000552713 RPS6KL1Q9Y6S9 549 aa8.46□□□□□ -1.06
CDK4-213ENST00000552713 SEC16AO15027 2179 aa8.46□□□□□ -1.06
CDK4-213ENST00000552713 CROCCQ5TZA2 2017 aa8.46□□□□□ -1.06
CDK4-213ENST00000552713 C2CD3Q4AC94 2353 aa8.46□□□□□ -1.06
CDK4-213ENST00000552713 GTPBP10A4D1E9 387 aaKnown RBP8.45□□□□□ -1.06
CDK4-213ENST00000552713 TTLL8A6PVC2 850 aa8.45□□□□□ -1.06
CDK4-213ENST00000552713 CREB3O43889 395 aa8.45□□□□□ -1.06
CDK4-213ENST00000552713 PRAMEF11O60813 436 aa8.45□□□□□ -1.06
CDK4-213ENST00000552713 VPS4BO75351 444 aa8.45□□□□□ -1.06
CDK4-213ENST00000552713 CLDN1O95832 211 aa8.45□□□□□ -1.06
CDK4-213ENST00000552713 POU3F2P20265 443 aaPredicted RBP8.45□□□□□ -1.06
CDK4-213ENST00000552713 TNFAIP3P21580 790 aa8.45□□□□□ -1.06
CDK4-213ENST00000552713 SDC4P31431 198 aa8.45□□□□□ -1.06
CDK4-213ENST00000552713 DCTP40126 519 aa8.45□□□□□ -1.06
CDK4-213ENST00000552713 ETV3P41162 512 aa8.45□□□□□ -1.06
CDK4-213ENST00000552713 ACTR1BP42025 376 aa8.45□□□□□ -1.06
CDK4-213ENST00000552713 PTPN9P43378 593 aa8.45□□□□□ -1.06
CDK4-213ENST00000552713 YBEYP58557 167 aaPredicted RBP8.45□□□□□ -1.06
CDK4-213ENST00000552713 ACTR1AP61163 376 aa8.45□□□□□ -1.06
CDK4-213ENST00000552713 BIRC2Q13490 618 aa8.45□□□□□ -1.06
CDK4-213ENST00000552713 RAPGEF1Q13905 1077 aa8.45□□□□□ -1.06
CDK4-213ENST00000552713 SEPT6Q14141 434 aa8.45□□□□□ -1.06
CDK4-213ENST00000552713 GRM3Q14832 879 aa8.45□□□□□ -1.06
CDK4-213ENST00000552713 CNGA3Q16281 694 aa8.45□□□□□ -1.06
CDK4-213ENST00000552713 CRTC2Q53ET0 693 aaPredicted RBP8.45□□□□□ -1.06
CDK4-213ENST00000552713 PPP1R15BQ5SWA1 713 aa8.45□□□□□ -1.06
CDK4-213ENST00000552713 DENND2CQ68D51 928 aa8.45□□□□□ -1.06
CDK4-213ENST00000552713 DOK6Q6PKX4 331 aa8.45□□□□□ -1.06
CDK4-213ENST00000552713 CEACAM20Q6UY09 585 aa8.45□□□□□ -1.06
CDK4-213ENST00000552713 ARHGAP36Q6ZRI8 547 aa8.45□□□□□ -1.06
CDK4-213ENST00000552713 RFLNAQ6ZTI6 216 aa8.45□□□□□ -1.06
CDK4-213ENST00000552713 STRADAQ7RTN6 431 aa8.45□□□□□ -1.06
CDK4-213ENST00000552713 HSD11B1LQ7Z5J1 315 aa8.45□□□□□ -1.06
CDK4-213ENST00000552713 TRIM74Q86UV6 250 aa8.45□□□□□ -1.06
CDK4-213ENST00000552713 CCDC13Q8IYE1 715 aa8.45□□□□□ -1.06
CDK4-213ENST00000552713 UMODL1-AS1Q8N2C9 162 aa8.45□□□□□ -1.06
CDK4-213ENST00000552713 GALNT11Q8NCW6 608 aa8.45□□□□□ -1.06
CDK4-213ENST00000552713 SLC30A5Q8TAD4 765 aa8.45□□□□□ -1.06
CDK4-213ENST00000552713 CPT1CQ8TCG5 803 aa8.45□□□□□ -1.06
CDK4-213ENST00000552713 SLC37A2Q8TED4 501 aa8.45□□□□□ -1.06
CDK4-213ENST00000552713 FAM172AQ8WUF8 416 aa8.45□□□□□ -1.06
CDK4-213ENST00000552713 NTAN1Q96AB6 310 aa8.45□□□□□ -1.06
CDK4-213ENST00000552713 NUS1Q96E22 293 aa8.45□□□□□ -1.06
CDK4-213ENST00000552713 TEFMQ96QE5 360 aaKnown RBP8.45□□□□□ -1.06
CDK4-213ENST00000552713 TUBGCP5Q96RT8 1024 aa8.45□□□□□ -1.06
CDK4-213ENST00000552713 EFHD1Q9BUP0 239 aa8.45□□□□□ -1.06
CDK4-213ENST00000552713 TRIM55Q9BYV6 548 aa8.45□□□□□ -1.06
CDK4-213ENST00000552713 SLC39A8Q9C0K1 460 aa8.45□□□□□ -1.06
CDK4-213ENST00000552713 LRRC19Q9H756 370 aa8.45□□□□□ -1.06
CDK4-213ENST00000552713 FBXO8Q9NRD0 319 aa8.45□□□□□ -1.06
CDK4-213ENST00000552713 PHPT1Q9NRX4 125 aaPredicted RBP8.45□□□□□ -1.06
CDK4-213ENST00000552713 KLHL3Q9UH77 587 aa8.45□□□□□ -1.06
CDK4-213ENST00000552713 VPS4AQ9UN37 437 aa8.45□□□□□ -1.06
CDK4-213ENST00000552713 SRPK3Q9UPE1 567 aa8.45□□□□□ -1.06
CDK4-213ENST00000552713 SLC17A4Q9Y2C5 497 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms