RNA–Protein interactions for RNA: ENST00000552215.5

CHPT1-208, Transcript of choline phosphotransferase 1, humanhuman

TSL 1 (best)

Gene CHPT1, Length 4,342 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-208ENST00000552215 RPA3P35244 121 aaPredicted RBP8.17□□□□□ -1.1
CHPT1-208ENST00000552215 BTKQ06187 659 aa8.17□□□□□ -1.1
CHPT1-208ENST00000552215 SEMA5AQ13591 1074 aa8.17□□□□□ -1.1
CHPT1-208ENST00000552215 ZNF77Q15935 545 aa8.17□□□□□ -1.1
CHPT1-208ENST00000552215 UGP2Q16851 508 aa8.17□□□□□ -1.1
CHPT1-208ENST00000552215 RBM20Q5T481 1227 aaKnown RBP8.17□□□□□ -1.1
CHPT1-208ENST00000552215 CEP68Q76N32 757 aa8.17□□□□□ -1.1
CHPT1-208ENST00000552215 ARCQ7LC44 396 aa8.17□□□□□ -1.1
CHPT1-208ENST00000552215 HID1Q8IV36 788 aa8.17□□□□□ -1.1
CHPT1-208ENST00000552215 SLC44A3Q8N4M1 653 aa8.17□□□□□ -1.1
CHPT1-208ENST00000552215 JPH3Q8WXH2 748 aaPredicted RBP8.17□□□□□ -1.1
CHPT1-208ENST00000552215 ZFRQ96KR1 1074 aaKnown RBP8.17□□□□□ -1.1
CHPT1-208ENST00000552215 LRRC37A2A6NM11 1700 aa8.17□□□□□ -1.1
CHPT1-208ENST00000552215 NEMP2A6NFY4 417 aa8.17□□□□□ -1.1
CHPT1-208ENST00000552215 PRNPP04156 253 aa8.17□□□□□ -1.1
CHPT1-208ENST00000552215 RALBP11234 206 aa8.17□□□□□ -1.1
CHPT1-208ENST00000552215 HLA-DPA1P20036 260 aa8.17□□□□□ -1.1
CHPT1-208ENST00000552215 HNF4AP41235 474 aa8.17□□□□□ -1.1
CHPT1-208ENST00000552215 SLC1A2P43004 574 aa8.17□□□□□ -1.1
CHPT1-208ENST00000552215 PIK3CGP48736 1102 aa8.17□□□□□ -1.1
CHPT1-208ENST00000552215 CHI3L2Q15782 390 aa8.17□□□□□ -1.1
CHPT1-208ENST00000552215 CCDC6Q16204 474 aa8.17□□□□□ -1.1
CHPT1-208ENST00000552215 QPCTQ16769 361 aa8.17□□□□□ -1.1
CHPT1-208ENST00000552215 SCG3Q8WXD2 468 aaKnown RBP8.17□□□□□ -1.1
CHPT1-208ENST00000552215 SPOCK2Q92563 424 aa8.17□□□□□ -1.1
CHPT1-208ENST00000552215 MTFMTQ96DP5 389 aaKnown RBP8.17□□□□□ -1.1
CHPT1-208ENST00000552215 PPP1R16AQ96I34 528 aa8.17□□□□□ -1.1
CHPT1-208ENST00000552215 OLFM3Q96PB7 478 aa8.17□□□□□ -1.1
CHPT1-208ENST00000552215 SLC17A7Q9P2U7 560 aa8.17□□□□□ -1.1
CHPT1-208ENST00000552215 TCAF1Q9Y4C2 921 aa8.17□□□□□ -1.1
CHPT1-208ENST00000552215 NPIPB15A6NHN6 443 aaPredicted RBP8.16□□□□□ -1.1
CHPT1-208ENST00000552215 RASGRP1O95267 797 aa8.16□□□□□ -1.1
CHPT1-208ENST00000552215 BGNP21810 368 aa8.16□□□□□ -1.1
CHPT1-208ENST00000552215 PRKCHP24723 683 aa8.16□□□□□ -1.1
CHPT1-208ENST00000552215 CTHP32929 405 aa8.16□□□□□ -1.1
CHPT1-208ENST00000552215 GP5P40197 560 aa8.16□□□□□ -1.1
CHPT1-208ENST00000552215 DHPSP49366 369 aaPredicted RBP8.16□□□□□ -1.1
CHPT1-208ENST00000552215 GSCP56915 257 aaPredicted RBP8.16□□□□□ -1.1
CHPT1-208ENST00000552215 CNTN1Q12860 1018 aa8.16□□□□□ -1.1
CHPT1-208ENST00000552215 ITGA9Q13797 1035 aa8.16□□□□□ -1.1
CHPT1-208ENST00000552215 TCEAL1Q15170 157 aa8.16□□□□□ -1.1
CHPT1-208ENST00000552215 RBBP7Q16576 425 aa8.16□□□□□ -1.1
CHPT1-208ENST00000552215 TMEM215Q68D42 235 aa8.16□□□□□ -1.1
CHPT1-208ENST00000552215 KLHDC10Q6PID8 442 aa8.16□□□□□ -1.1
CHPT1-208ENST00000552215 SERPINA9Q86WD7 417 aa8.16□□□□□ -1.1
CHPT1-208ENST00000552215 RNF168Q8IYW5 571 aaPredicted RBP8.16□□□□□ -1.1
CHPT1-208ENST00000552215 CDKN2AIPNLQ96HQ2 116 aa8.16□□□□□ -1.1
CHPT1-208ENST00000552215 FGFR1OP2Q9NVK5 253 aa8.16□□□□□ -1.1
CHPT1-208ENST00000552215 IGSF9Q9P2J2 1179 aa8.16□□□□□ -1.1
CHPT1-208ENST00000552215 SARDHQ9UL12 918 aa8.16□□□□□ -1.1
CHPT1-208ENST00000552215 ACOT9Q9Y305 439 aa8.16□□□□□ -1.1
CHPT1-208ENST00000552215 ZNF711Q9Y462 761 aa8.16□□□□□ -1.1
CHPT1-208ENST00000552215 SEC16AO15027 2179 aa8.16□□□□□ -1.1
CHPT1-208ENST00000552215 CHD9Q3L8U1 2897 aa8.16□□□□□ -1.1
CHPT1-208ENST00000552215 COL6A3P12111 3177 aa8.16□□□□□ -1.1
CHPT1-208ENST00000552215 GOLGA8QA0A0J9YX86 632 aa8.16□□□□□ -1.1
CHPT1-208ENST00000552215 GOLGA8OA6NCC3 632 aa8.16□□□□□ -1.1
CHPT1-208ENST00000552215 KRT87PA6NCN2 255 aa8.16□□□□□ -1.1
CHPT1-208ENST00000552215 GRXCR2A6NFK2 248 aa8.16□□□□□ -1.1
CHPT1-208ENST00000552215 DRGXA6NNA5 263 aa8.16□□□□□ -1.1
CHPT1-208ENST00000552215 MEI4A8MW99 385 aa8.16□□□□□ -1.1
CHPT1-208ENST00000552215 GOLGA8NF8WBI6 632 aa8.16□□□□□ -1.1
CHPT1-208ENST00000552215 PPFIA2O75334 1257 aa8.16□□□□□ -1.1
CHPT1-208ENST00000552215 STATHP02808 62 aa8.16□□□□□ -1.1
CHPT1-208ENST00000552215 ITGA2BP08514 1039 aa8.16□□□□□ -1.1
CHPT1-208ENST00000552215 CHRM1P11229 460 aaPredicted RBP8.16□□□□□ -1.1
CHPT1-208ENST00000552215 GRIA2P42262 883 aa8.16□□□□□ -1.1
CHPT1-208ENST00000552215 LIG3P49916 1009 aa8.16□□□□□ -1.1
CHPT1-208ENST00000552215 IRF9Q00978 393 aa8.16□□□□□ -1.1
CHPT1-208ENST00000552215 SEMA3BQ13214 749 aa8.16□□□□□ -1.1
CHPT1-208ENST00000552215 SNAP47Q5SQN1 464 aa8.16□□□□□ -1.1
CHPT1-208ENST00000552215 TSTD2Q5T7W7 516 aa8.16□□□□□ -1.1
CHPT1-208ENST00000552215 LRRC49Q8IUZ0 686 aa8.16□□□□□ -1.1
CHPT1-208ENST00000552215 DDIASQ8IXT1 998 aa8.16□□□□□ -1.1
CHPT1-208ENST00000552215 ZNF419Q96HQ0 510 aaPredicted RBP8.16□□□□□ -1.1
CHPT1-208ENST00000552215 FEM1CQ96JP0 617 aa8.16□□□□□ -1.1
CHPT1-208ENST00000552215 SIGLEC10Q96LC7 697 aa8.16□□□□□ -1.1
CHPT1-208ENST00000552215 NECTIN4Q96NY8 510 aa8.16□□□□□ -1.1
CHPT1-208ENST00000552215 GPR21Q99679 349 aa8.16□□□□□ -1.1
CHPT1-208ENST00000552215 PITPNM3Q9BZ71 974 aa8.16□□□□□ -1.1
CHPT1-208ENST00000552215 VPS45Q9NRW7 570 aa8.16□□□□□ -1.1
CHPT1-208ENST00000552215 IMP3Q9NV31 184 aaKnown RBP8.16□□□□□ -1.1
CHPT1-208ENST00000552215 SPATA6Q9NWH7 488 aaPredicted RBP8.16□□□□□ -1.1
CHPT1-208ENST00000552215 PPARGC1AQ9UBK2 798 aaKnown RBP8.16□□□□□ -1.1
CHPT1-208ENST00000552215 GULP1Q9UBP9 304 aa8.16□□□□□ -1.1
CHPT1-208ENST00000552215 HMGB1P1B2RPK0 211 aaPredicted RBP8.16□□□□□ -1.1
CHPT1-208ENST00000552215 IGLV3-25P01717 112 aa8.16□□□□□ -1.1
CHPT1-208ENST00000552215 PLCL1Q15111 1095 aa8.16□□□□□ -1.1
CHPT1-208ENST00000552215 FAM46CQ5VWP2 391 aa8.16□□□□□ -1.1
CHPT1-208ENST00000552215 ZNF449Q6P9G9 518 aa8.16□□□□□ -1.1
CHPT1-208ENST00000552215 C4orf22Q6V702 233 aa8.16□□□□□ -1.1
CHPT1-208ENST00000552215 CFAP206Q8IYR0 622 aa8.16□□□□□ -1.1
CHPT1-208ENST00000552215 SIDT2Q8NBJ9 832 aaKnown RBP8.16□□□□□ -1.1
CHPT1-208ENST00000552215 CALML6Q8TD86 181 aa8.16□□□□□ -1.1
CHPT1-208ENST00000552215 ULK4Q96C45 1275 aa8.16□□□□□ -1.1
CHPT1-208ENST00000552215 IMP4Q96G21 291 aaKnown RBP8.16□□□□□ -1.1
CHPT1-208ENST00000552215 BOCQ9BWV1 1114 aa8.16□□□□□ -1.1
CHPT1-208ENST00000552215 KLHL25Q9H0H3 589 aa8.16□□□□□ -1.1
CHPT1-208ENST00000552215 HPS4Q9NQG7 708 aa8.16□□□□□ -1.1
CHPT1-208ENST00000552215 PKD2L2Q9NZM6 624 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms