RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 GTSE1Q9NYZ3 720 aa14□□□□□ -0.17
RAB3IP-216ENST00000552199 SSX2IPQ9Y2D8 614 aa14□□□□□ -0.17
RAB3IP-216ENST00000552199 FCF1Q9Y324 198 aaKnown RBP14□□□□□ -0.17
RAB3IP-216ENST00000552199 GBF1Q92538 1859 aa14□□□□□ -0.17
RAB3IP-216ENST00000552199 A0A088AWK7 358 aa14□□□□□ -0.17
RAB3IP-216ENST00000552199 UBA6A0AVT1 1052 aaPredicted RBP14□□□□□ -0.17
RAB3IP-216ENST00000552199 TRPC5OSA6NMA1 111 aa14□□□□□ -0.17
RAB3IP-216ENST00000552199 TMEM233B4DJY2 109 aa14□□□□□ -0.17
RAB3IP-216ENST00000552199 SLC22A2O15244 555 aa14□□□□□ -0.17
RAB3IP-216ENST00000552199 FZD6O60353 706 aa14□□□□□ -0.17
RAB3IP-216ENST00000552199 NDUFS3O75489 264 aa14□□□□□ -0.17
RAB3IP-216ENST00000552199 CIB2O75838 187 aa14□□□□□ -0.17
RAB3IP-216ENST00000552199 BAIAP3O94812 1187 aa14□□□□□ -0.17
RAB3IP-216ENST00000552199 ZNF37AP17032 561 aaPredicted RBP14□□□□□ -0.17
RAB3IP-216ENST00000552199 FMO4P31512 558 aa14□□□□□ -0.17
RAB3IP-216ENST00000552199 GJA8P48165 433 aa14□□□□□ -0.17
RAB3IP-216ENST00000552199 PLK1P53350 603 aa14□□□□□ -0.17
RAB3IP-216ENST00000552199 SLC7A9P82251 487 aa14□□□□□ -0.17
RAB3IP-216ENST00000552199 NFKB2Q00653 900 aa14□□□□□ -0.17
RAB3IP-216ENST00000552199 SULT2A1Q06520 285 aa14□□□□□ -0.17
RAB3IP-216ENST00000552199 GALNT1Q10472 559 aaPredicted RBP14□□□□□ -0.17
RAB3IP-216ENST00000552199 PDAP1Q13442 181 aaKnown RBP14□□□□□ -0.17
RAB3IP-216ENST00000552199 LILRA6Q6PI73 481 aa14□□□□□ -0.17
RAB3IP-216ENST00000552199 FRMD7Q6ZUT3 714 aa14□□□□□ -0.17
RAB3IP-216ENST00000552199 TMC8Q8IU68 726 aa14□□□□□ -0.17
RAB3IP-216ENST00000552199 TMEM199Q8N511 208 aa14□□□□□ -0.17
RAB3IP-216ENST00000552199 EFHBQ8N7U6 833 aa14□□□□□ -0.17
RAB3IP-216ENST00000552199 MAB21L3Q8N8X9 362 aa14□□□□□ -0.17
RAB3IP-216ENST00000552199 L3HYPDHQ96EM0 354 aa14□□□□□ -0.17
RAB3IP-216ENST00000552199 MAELQ96JY0 434 aaKnown RBP14□□□□□ -0.17
RAB3IP-216ENST00000552199 LENG8Q96PV6 779 aaPredicted RBP14□□□□□ -0.17
RAB3IP-216ENST00000552199 GSTO2Q9H4Y5 243 aa14□□□□□ -0.17
RAB3IP-216ENST00000552199 POLR3BQ9NW08 1133 aaPredicted RBP14□□□□□ -0.17
RAB3IP-216ENST00000552199 HACD3Q9P035 362 aa14□□□□□ -0.17
RAB3IP-216ENST00000552199 SLC7A8Q9UHI5 535 aa14□□□□□ -0.17
RAB3IP-216ENST00000552199 ZNF510Q9Y2H8 683 aa14□□□□□ -0.17
RAB3IP-216ENST00000552199 SMIM24O75264 130 aa13.99□□□□□ -0.17
RAB3IP-216ENST00000552199 RHOBTB1O94844 696 aa13.99□□□□□ -0.17
RAB3IP-216ENST00000552199 PSMG1O95456 288 aa13.99□□□□□ -0.17
RAB3IP-216ENST00000552199 MT-CO1P00395 513 aa13.99□□□□□ -0.17
RAB3IP-216ENST00000552199 LRG1P02750 347 aa13.99□□□□□ -0.17
RAB3IP-216ENST00000552199 PIK3R1P27986 724 aa13.99□□□□□ -0.17
RAB3IP-216ENST00000552199 ADSLP30566 484 aaPredicted RBP13.99□□□□□ -0.17
RAB3IP-216ENST00000552199 TRMT5Q32P41 509 aaKnown RBP13.99□□□□□ -0.17
RAB3IP-216ENST00000552199 ZNF678Q5SXM1 525 aa13.99□□□□□ -0.17
RAB3IP-216ENST00000552199 ATXN7L2Q5T6C5 722 aaPredicted RBP13.99□□□□□ -0.17
RAB3IP-216ENST00000552199 C6orf163Q5TEZ5 329 aa13.99□□□□□ -0.17
RAB3IP-216ENST00000552199 NXNQ6DKJ4 435 aa13.99□□□□□ -0.17
RAB3IP-216ENST00000552199 OTOP2Q7RTS6 562 aa13.99□□□□□ -0.17
RAB3IP-216ENST00000552199 MFN1Q8IWA4 741 aa13.99□□□□□ -0.17
RAB3IP-216ENST00000552199 APCDD1Q8J025 514 aa13.99□□□□□ -0.17
RAB3IP-216ENST00000552199 AFAP1L2Q8N4X5 818 aa13.99□□□□□ -0.17
RAB3IP-216ENST00000552199 BHMTQ93088 406 aa13.99□□□□□ -0.17
RAB3IP-216ENST00000552199 RTKNQ9BST9 563 aa13.99□□□□□ -0.17
RAB3IP-216ENST00000552199 TRMOQ9BU70 441 aa13.99□□□□□ -0.17
RAB3IP-216ENST00000552199 SYTL2Q9HCH5 934 aa13.99□□□□□ -0.17
RAB3IP-216ENST00000552199 TAS2R13Q9NYV9 303 aa13.99□□□□□ -0.17
RAB3IP-216ENST00000552199 CFAP97Q9P2B7 532 aa13.99□□□□□ -0.17
RAB3IP-216ENST00000552199 FKBPLQ9UIM3 349 aa13.99□□□□□ -0.17
RAB3IP-216ENST00000552199 H7C0S8 307 aa13.98□□□□□ -0.17
RAB3IP-216ENST00000552199 SDHDO14521 159 aa13.98□□□□□ -0.17
RAB3IP-216ENST00000552199 STX7O15400 261 aaKnown RBP13.98□□□□□ -0.17
RAB3IP-216ENST00000552199 KRT36O76013 467 aa13.98□□□□□ -0.17
RAB3IP-216ENST00000552199 SRP72O76094 671 aaKnown RBP13.98□□□□□ -0.17
RAB3IP-216ENST00000552199 CXCL14O95715 111 aa13.98□□□□□ -0.17
RAB3IP-216ENST00000552199 CKMP06732 381 aa13.98□□□□□ -0.17
RAB3IP-216ENST00000552199 THRAP10827 490 aa13.98□□□□□ -0.17
RAB3IP-216ENST00000552199 ITGAXP20702 1163 aa13.98□□□□□ -0.17
RAB3IP-216ENST00000552199 MC4RP32245 332 aa13.98□□□□□ -0.17
RAB3IP-216ENST00000552199 PPARGP37231 505 aaPredicted RBP13.98□□□□□ -0.17
RAB3IP-216ENST00000552199 CDKN1CP49918 316 aaPredicted RBP13.98□□□□□ -0.17
RAB3IP-216ENST00000552199 SATB1Q01826 763 aa13.98□□□□□ -0.17
RAB3IP-216ENST00000552199 CUL3Q13618 768 aa13.98□□□□□ -0.17
RAB3IP-216ENST00000552199 PTPRRQ15256 657 aa13.98□□□□□ -0.17
RAB3IP-216ENST00000552199 SETMARQ53H47 684 aaPredicted RBP13.98□□□□□ -0.17
RAB3IP-216ENST00000552199 RPS27LQ71UM5 84 aaKnown RBP13.98□□□□□ -0.17
RAB3IP-216ENST00000552199 CUZD1Q86UP6 607 aa13.98□□□□□ -0.17
RAB3IP-216ENST00000552199 PIANPQ8IYJ0 282 aa13.98□□□□□ -0.17
RAB3IP-216ENST00000552199 CPXM2Q8N436 756 aa13.98□□□□□ -0.17
RAB3IP-216ENST00000552199 RYBPQ8N488 228 aaPredicted RBP13.98□□□□□ -0.17
RAB3IP-216ENST00000552199 TTC16Q8NEE8 873 aa13.98□□□□□ -0.17
RAB3IP-216ENST00000552199 RHEBL1Q8TAI7 183 aa13.98□□□□□ -0.17
RAB3IP-216ENST00000552199 KCNV2Q8TDN2 545 aa13.98□□□□□ -0.17
RAB3IP-216ENST00000552199 ACTRT2Q8TDY3 377 aa13.98□□□□□ -0.17
RAB3IP-216ENST00000552199 DDI1Q8WTU0 396 aa13.98□□□□□ -0.17
RAB3IP-216ENST00000552199 STMN2Q93045 179 aa13.98□□□□□ -0.17
RAB3IP-216ENST00000552199 C2orf49Q9BVC5 232 aaPredicted RBP13.98□□□□□ -0.17
RAB3IP-216ENST00000552199 CCDC68Q9H2F9 335 aa13.98□□□□□ -0.17
RAB3IP-216ENST00000552199 TFB2MQ9H5Q4 396 aaKnown RBP13.98□□□□□ -0.17
RAB3IP-216ENST00000552199 PCDH10Q9P2E7 1040 aa13.98□□□□□ -0.17
RAB3IP-216ENST00000552199 G3BP2Q9UN86 482 aaKnown RBP13.98□□□□□ -0.17
RAB3IP-216ENST00000552199 ARHGAP26Q9UNA1 814 aa13.98□□□□□ -0.17
RAB3IP-216ENST00000552199 VPS9D1Q9Y2B5 631 aa13.98□□□□□ -0.17
RAB3IP-216ENST00000552199 MED16Q9Y2X0 877 aa13.98□□□□□ -0.17
RAB3IP-216ENST00000552199 SH3BP1Q9Y3L3 701 aa13.98□□□□□ -0.17
RAB3IP-216ENST00000552199 PCDHB9Q9Y5E1 797 aa13.98□□□□□ -0.17
RAB3IP-216ENST00000552199 RGSL1A5PLK6 1076 aa13.98□□□□□ -0.17
RAB3IP-216ENST00000552199 H3BMM5 538 aa13.98□□□□□ -0.17
RAB3IP-216ENST00000552199 K7ERQ8 282 aa13.98□□□□□ -0.17
RAB3IP-216ENST00000552199 LINC00271P0C7V0 271 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms