RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 TAS2R1Q9NYW7 299 aa11.5□□□□□ -0.57
RAB5C-208ENST00000551338 KIAA1522Q9P206 1035 aaPredicted RBP11.5□□□□□ -0.57
RAB5C-208ENST00000551338 EVLQ9UI08 416 aaPredicted RBP11.5□□□□□ -0.57
RAB5C-208ENST00000551338 TAGLN3Q9UI15 199 aa11.5□□□□□ -0.57
RAB5C-208ENST00000551338 ZDHHC2Q9UIJ5 367 aa11.5□□□□□ -0.57
RAB5C-208ENST00000551338 SORCS3Q9UPU3 1222 aa11.5□□□□□ -0.57
RAB5C-208ENST00000551338 APOBEC2Q9Y235 224 aaKnown RBP11.5□□□□□ -0.57
RAB5C-208ENST00000551338 COL4A3Q01955 1670 aa11.49□□□□□ -0.57
RAB5C-208ENST00000551338 MUC22E2RYF6 1773 aaPredicted RBP11.49□□□□□ -0.57
RAB5C-208ENST00000551338 KIAA1549LQ6ZVL6 1849 aa11.49□□□□□ -0.57
RAB5C-208ENST00000551338 A0A0U1RQS6 177 aa11.49□□□□□ -0.57
RAB5C-208ENST00000551338 UBA6A0AVT1 1052 aaPredicted RBP11.49□□□□□ -0.57
RAB5C-208ENST00000551338 LINC01553A4QN01 128 aa11.49□□□□□ -0.57
RAB5C-208ENST00000551338 SPECC1L-ADORA2AF8WAN1 911 aa11.49□□□□□ -0.57
RAB5C-208ENST00000551338 MATN2O00339 956 aa11.49□□□□□ -0.57
RAB5C-208ENST00000551338 STX7O15400 261 aaKnown RBP11.49□□□□□ -0.57
RAB5C-208ENST00000551338 GSC2O15499 205 aa11.49□□□□□ -0.57
RAB5C-208ENST00000551338 ZBTB14O43829 449 aa11.49□□□□□ -0.57
RAB5C-208ENST00000551338 TLL1O43897 1013 aa11.49□□□□□ -0.57
RAB5C-208ENST00000551338 RFPL2O75678 378 aa11.49□□□□□ -0.57
RAB5C-208ENST00000551338 ARHGEF15O94989 841 aa11.49□□□□□ -0.57
RAB5C-208ENST00000551338 PRAMEF12O95522 483 aa11.49□□□□□ -0.57
RAB5C-208ENST00000551338 CTPS1P17812 591 aa11.49□□□□□ -0.57
RAB5C-208ENST00000551338 AOC1P19801 751 aa11.49□□□□□ -0.57
RAB5C-208ENST00000551338 IRS1P35568 1242 aa11.49□□□□□ -0.57
RAB5C-208ENST00000551338 SERPINB5P36952 375 aa11.49□□□□□ -0.57
RAB5C-208ENST00000551338 CSNK1DP48730 415 aa11.49□□□□□ -0.57
RAB5C-208ENST00000551338 RPL14P50914 215 aaKnown RBP11.49□□□□□ -0.57
RAB5C-208ENST00000551338 XIAPP98170 497 aa11.49□□□□□ -0.57
RAB5C-208ENST00000551338 PITRM1Q5JRX3 1037 aa11.49□□□□□ -0.57
RAB5C-208ENST00000551338 CFAP157Q5JU67 520 aa11.49□□□□□ -0.57
RAB5C-208ENST00000551338 ARMC12Q5T9G4 340 aa11.49□□□□□ -0.57
RAB5C-208ENST00000551338 KLC3Q6P597 504 aa11.49□□□□□ -0.57
RAB5C-208ENST00000551338 TRIM67Q6ZTA4 783 aa11.49□□□□□ -0.57
RAB5C-208ENST00000551338 LYSMD3Q7Z3D4 306 aa11.49□□□□□ -0.57
RAB5C-208ENST00000551338 PIWIL4Q7Z3Z4 852 aaKnown RBP11.49□□□□□ -0.57
RAB5C-208ENST00000551338 SUGP1Q8IWZ8 645 aaKnown RBP11.49□□□□□ -0.57
RAB5C-208ENST00000551338 CCNYL1Q8N7R7 359 aa11.49□□□□□ -0.57
RAB5C-208ENST00000551338 OR6K2Q8NGY2 324 aa11.49□□□□□ -0.57
RAB5C-208ENST00000551338 FBXO27Q8NI29 283 aa11.49□□□□□ -0.57
RAB5C-208ENST00000551338 AGR3Q8TD06 166 aa11.49□□□□□ -0.57
RAB5C-208ENST00000551338 USP13Q92995 863 aaPredicted RBP11.49□□□□□ -0.57
RAB5C-208ENST00000551338 VOPP1Q96AW1 172 aa11.49□□□□□ -0.57
RAB5C-208ENST00000551338 CCDC126Q96EE4 140 aa11.49□□□□□ -0.57
RAB5C-208ENST00000551338 OR52B2Q96RD2 323 aa11.49□□□□□ -0.57
RAB5C-208ENST00000551338 TCF12Q99081 682 aa11.49□□□□□ -0.57
RAB5C-208ENST00000551338 C17orf80Q9BSJ5 609 aa11.49□□□□□ -0.57
RAB5C-208ENST00000551338 MAN1C1Q9NR34 630 aa11.49□□□□□ -0.57
RAB5C-208ENST00000551338 TLR9Q9NR96 1032 aa11.49□□□□□ -0.57
RAB5C-208ENST00000551338 ABCB8Q9NUT2 735 aa11.49□□□□□ -0.57
RAB5C-208ENST00000551338 NCKIPSDQ9NZQ3 722 aa11.49□□□□□ -0.57
RAB5C-208ENST00000551338 IL17CQ9P0M4 197 aa11.49□□□□□ -0.57
RAB5C-208ENST00000551338 CCL26Q9Y258 94 aa11.49□□□□□ -0.57
RAB5C-208ENST00000551338 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.49□□□□□ -0.57
RAB5C-208ENST00000551338 PCDHB9Q9Y5E1 797 aa11.49□□□□□ -0.57
RAB5C-208ENST00000551338 SLC4A7Q9Y6M7 1214 aa11.49□□□□□ -0.57
RAB5C-208ENST00000551338 PCNTO95613 3336 aa11.48□□□□□ -0.57
RAB5C-208ENST00000551338 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.48□□□□□ -0.57
RAB5C-208ENST00000551338 F8W8V4 182 aa11.48□□□□□ -0.57
RAB5C-208ENST00000551338 H3BMM5 538 aa11.48□□□□□ -0.57
RAB5C-208ENST00000551338 HDAC3O15379 428 aa11.48□□□□□ -0.57
RAB5C-208ENST00000551338 HTRA2O43464 458 aaPredicted RBP11.48□□□□□ -0.57
RAB5C-208ENST00000551338 SOCS5O75159 536 aa11.48□□□□□ -0.57
RAB5C-208ENST00000551338 NDUFS3O75489 264 aa11.48□□□□□ -0.57
RAB5C-208ENST00000551338 ZNF821O75541 412 aaPredicted RBP11.48□□□□□ -0.57
RAB5C-208ENST00000551338 IPO13O94829 963 aaKnown RBP11.48□□□□□ -0.57
RAB5C-208ENST00000551338 RHOBTB1O94844 696 aa11.48□□□□□ -0.57
RAB5C-208ENST00000551338 IGSF6O95976 241 aa11.48□□□□□ -0.57
RAB5C-208ENST00000551338 JUNP05412 331 aaKnown RBP11.48□□□□□ -0.57
RAB5C-208ENST00000551338 ALPIP09923 528 aa11.48□□□□□ -0.57
RAB5C-208ENST00000551338 SRCP12931 536 aa11.48□□□□□ -0.57
RAB5C-208ENST00000551338 EPCAMP16422 314 aa11.48□□□□□ -0.57
RAB5C-208ENST00000551338 PTPN2P17706 415 aa11.48□□□□□ -0.57
RAB5C-208ENST00000551338 SP100P23497 879 aaPredicted RBP11.48□□□□□ -0.57
RAB5C-208ENST00000551338 DDX6P26196 483 aaKnown RBP eCLIP11.48□□□□□ -0.57
RAB5C-208ENST00000551338 PMLP29590 882 aa11.48□□□□□ -0.57
RAB5C-208ENST00000551338 FMO4P31512 558 aa11.48□□□□□ -0.57
RAB5C-208ENST00000551338 CTSOP43234 321 aaPredicted RBP11.48□□□□□ -0.57
RAB5C-208ENST00000551338 KCNC1P48547 511 aa11.48□□□□□ -0.57
RAB5C-208ENST00000551338 NFKB2Q00653 900 aa11.48□□□□□ -0.57
RAB5C-208ENST00000551338 SLC20A2Q08357 652 aa11.48□□□□□ -0.57
RAB5C-208ENST00000551338 PDAP1Q13442 181 aaKnown RBP11.48□□□□□ -0.57
RAB5C-208ENST00000551338 CAMK1Q14012 370 aa11.48□□□□□ -0.57
RAB5C-208ENST00000551338 SLC5A9Q2M3M2 681 aa11.48□□□□□ -0.57
RAB5C-208ENST00000551338 FUT11Q495W5 492 aa11.48□□□□□ -0.57
RAB5C-208ENST00000551338 ZRANB3Q5FWF4 1079 aa11.48□□□□□ -0.57
RAB5C-208ENST00000551338 CTSL3PQ5NE16 218 aa11.48□□□□□ -0.57
RAB5C-208ENST00000551338 SEL1L3Q68CR1 1132 aa11.48□□□□□ -0.57
RAB5C-208ENST00000551338 ASTLQ6HA08 431 aaPredicted RBP11.48□□□□□ -0.57
RAB5C-208ENST00000551338 ISCA2Q86U28 154 aa11.48□□□□□ -0.57
RAB5C-208ENST00000551338 CAMK1DQ8IU85 385 aa11.48□□□□□ -0.57
RAB5C-208ENST00000551338 SLC22A9Q8IVM8 553 aa11.48□□□□□ -0.57
RAB5C-208ENST00000551338 PIANPQ8IYJ0 282 aa11.48□□□□□ -0.57
RAB5C-208ENST00000551338 CMTM8Q8IZV2 173 aa11.48□□□□□ -0.57
RAB5C-208ENST00000551338 TEX9Q8N6V9 391 aa11.48□□□□□ -0.57
RAB5C-208ENST00000551338 DNAJC5GQ8N7S2 189 aa11.48□□□□□ -0.57
RAB5C-208ENST00000551338 KDM1BQ8NB78 822 aa11.48□□□□□ -0.57
RAB5C-208ENST00000551338 RBM15BQ8NDT2 890 aaKnown RBP11.48□□□□□ -0.57
RAB5C-208ENST00000551338 AGAP11Q8TF27 550 aa11.48□□□□□ -0.57
RAB5C-208ENST00000551338 EID2BQ96D98 161 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms