RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 TMCO3Q6UWJ1 677 aa21.67■■□□□ 1.06
SMARCC2-210ENST00000550519 PTCD2Q8WV60 388 aaKnown RBP21.67■■□□□ 1.06
SMARCC2-210ENST00000550519 SCRN2Q96FV2 425 aa21.67■■□□□ 1.06
SMARCC2-210ENST00000550519 SUFUQ9UMX1 484 aa21.67■■□□□ 1.06
SMARCC2-210ENST00000550519 ST14Q9Y5Y6 855 aa21.67■■□□□ 1.06
SMARCC2-210ENST00000550519 NPIPB15A6NHN6 443 aaPredicted RBP21.66■■□□□ 1.06
SMARCC2-210ENST00000550519 RHPN2P1A8MT19 583 aa21.66■■□□□ 1.06
SMARCC2-210ENST00000550519 ECEL1O95672 775 aa21.66■■□□□ 1.06
SMARCC2-210ENST00000550519 MYBL1P10243 752 aa21.66■■□□□ 1.06
SMARCC2-210ENST00000550519 CYP2A6P11509 494 aaPredicted RBP21.66■■□□□ 1.06
SMARCC2-210ENST00000550519 TCF4P15884 667 aa21.66■■□□□ 1.06
SMARCC2-210ENST00000550519 NFKBIAP25963 317 aa21.66■■□□□ 1.06
SMARCC2-210ENST00000550519 AK4P27144 223 aaPredicted RBP21.66■■□□□ 1.06
SMARCC2-210ENST00000550519 CD82P27701 267 aa21.66■■□□□ 1.06
SMARCC2-210ENST00000550519 SMTNL2Q2TAL5 461 aa21.66■■□□□ 1.06
SMARCC2-210ENST00000550519 AMZ1Q400G9 498 aa21.66■■□□□ 1.06
SMARCC2-210ENST00000550519 RALGPS1Q5JS13 557 aa21.66■■□□□ 1.06
SMARCC2-210ENST00000550519 MANEAQ5SRI9 462 aa21.66■■□□□ 1.06
SMARCC2-210ENST00000550519 DENND2CQ68D51 928 aa21.66■■□□□ 1.06
SMARCC2-210ENST00000550519 ZNF574Q6ZN55 896 aaPredicted RBP21.66■■□□□ 1.06
SMARCC2-210ENST00000550519 Q6ZVL8 140 aa21.66■■□□□ 1.06
SMARCC2-210ENST00000550519 TRIM11Q96F44 468 aa21.66■■□□□ 1.06
SMARCC2-210ENST00000550519 GBP4Q96PP9 640 aa21.66■■□□□ 1.06
SMARCC2-210ENST00000550519 CSPG4P5Q96PW8 444 aa21.66■■□□□ 1.06
SMARCC2-210ENST00000550519 MCCC1Q96RQ3 725 aaPredicted RBP21.66■■□□□ 1.06
SMARCC2-210ENST00000550519 SUDS3Q9H7L9 328 aaPredicted RBP21.66■■□□□ 1.06
SMARCC2-210ENST00000550519 MRPL47Q9HD33 250 aaKnown RBP21.66■■□□□ 1.06
SMARCC2-210ENST00000550519 MYO1AQ9UBC5 1043 aa21.66■■□□□ 1.06
SMARCC2-210ENST00000550519 SLC17A4Q9Y2C5 497 aa21.66■■□□□ 1.06
SMARCC2-210ENST00000550519 PPIL1Q9Y3C6 166 aa21.66■■□□□ 1.06
SMARCC2-210ENST00000550519 IQCJ-SCHIP1C9J366 451 aaPredicted RBP21.65■■□□□ 1.06
SMARCC2-210ENST00000550519 SLC28A2O43868 658 aa21.65■■□□□ 1.06
SMARCC2-210ENST00000550519 PGLSO95336 258 aa21.65■■□□□ 1.06
SMARCC2-210ENST00000550519 ALDH4A1P30038 563 aa21.65■■□□□ 1.06
SMARCC2-210ENST00000550519 GPR3P46089 330 aa21.65■■□□□ 1.06
SMARCC2-210ENST00000550519 GNPDA1P46926 289 aa21.65■■□□□ 1.06
SMARCC2-210ENST00000550519 MAXP61244 160 aa21.65■■□□□ 1.06
SMARCC2-210ENST00000550519 TYRO3Q06418 890 aa21.65■■□□□ 1.06
SMARCC2-210ENST00000550519 DPTQ07507 201 aa21.65■■□□□ 1.06
SMARCC2-210ENST00000550519 KLHL30Q0D2K2 578 aa21.65■■□□□ 1.06
SMARCC2-210ENST00000550519 PTPRRQ15256 657 aa21.65■■□□□ 1.06
SMARCC2-210ENST00000550519 TECPR1Q7Z6L1 1165 aa21.65■■□□□ 1.06
SMARCC2-210ENST00000550519 VASH2Q86V25 355 aa21.65■■□□□ 1.06
SMARCC2-210ENST00000550519 NAGSQ8N159 534 aa21.65■■□□□ 1.06
SMARCC2-210ENST00000550519 BBS5Q8N3I7 341 aa21.65■■□□□ 1.06
SMARCC2-210ENST00000550519 EXTL1Q92935 676 aa21.65■■□□□ 1.06
SMARCC2-210ENST00000550519 NUDT22Q9BRQ3 303 aa21.65■■□□□ 1.06
SMARCC2-210ENST00000550519 ISCUQ9H1K1 167 aa21.65■■□□□ 1.06
SMARCC2-210ENST00000550519 STAU2Q9NUL3 570 aaKnown RBP eCLIP21.65■■□□□ 1.06
SMARCC2-210ENST00000550519 AKAP7Q9P0M2 348 aaPredicted RBP21.65■■□□□ 1.06
SMARCC2-210ENST00000550519 PCDHB11Q9Y5F2 797 aa21.65■■□□□ 1.06
SMARCC2-210ENST00000550519 PCDHGA4Q9Y5G9 962 aa21.65■■□□□ 1.06
SMARCC2-210ENST00000550519 SPTA1P02549 2419 aa21.65■■□□□ 1.06
SMARCC2-210ENST00000550519 HGSO14964 777 aaPredicted RBP21.64■■□□□ 1.05
SMARCC2-210ENST00000550519 ZW10O43264 779 aa21.64■■□□□ 1.05
SMARCC2-210ENST00000550519 IVLP07476 585 aa21.64■■□□□ 1.05
SMARCC2-210ENST00000550519 RARAP10276 462 aa21.64■■□□□ 1.05
SMARCC2-210ENST00000550519 CCL4P13236 92 aa21.64■■□□□ 1.05
SMARCC2-210ENST00000550519 WT1P19544 449 aaPredicted RBP21.64■■□□□ 1.05
SMARCC2-210ENST00000550519 CD1CP29017 333 aa21.64■■□□□ 1.05
SMARCC2-210ENST00000550519 ADCY8P40145 1251 aa21.64■■□□□ 1.05
SMARCC2-210ENST00000550519 POLD2P49005 469 aa21.64■■□□□ 1.05
SMARCC2-210ENST00000550519 CTBSQ01459 385 aa21.64■■□□□ 1.05
SMARCC2-210ENST00000550519 CCDC183Q5T5S1 534 aa21.64■■□□□ 1.05
SMARCC2-210ENST00000550519 TMEM164Q5U3C3 297 aa21.64■■□□□ 1.05
SMARCC2-210ENST00000550519 MARC1Q5VT66 337 aa21.64■■□□□ 1.05
SMARCC2-210ENST00000550519 RAET1GQ6H3X3 334 aa21.64■■□□□ 1.05
SMARCC2-210ENST00000550519 SLC30A9Q6PML9 568 aa21.64■■□□□ 1.05
SMARCC2-210ENST00000550519 TSPAN33Q86UF1 283 aa21.64■■□□□ 1.05
SMARCC2-210ENST00000550519 ATPAF2Q8N5M1 289 aa21.64■■□□□ 1.05
SMARCC2-210ENST00000550519 PIH1D2Q8WWB5 315 aa21.64■■□□□ 1.05
SMARCC2-210ENST00000550519 PATE1Q8WXA2 126 aa21.64■■□□□ 1.05
SMARCC2-210ENST00000550519 HSPH1Q92598 858 aa21.64■■□□□ 1.05
SMARCC2-210ENST00000550519 SCARF2Q96GP6 870 aaPredicted RBP21.64■■□□□ 1.05
SMARCC2-210ENST00000550519 TLN1Q9Y490 2541 aaKnown RBP21.63■■□□□ 1.05
SMARCC2-210ENST00000550519 IGHV5-10-1A0A0J9YXX1 117 aa21.63■■□□□ 1.05
SMARCC2-210ENST00000550519 PYCARD-AS1I3L0S3 204 aa21.63■■□□□ 1.05
SMARCC2-210ENST00000550519 SOD1P00441 154 aa21.63■■□□□ 1.05
SMARCC2-210ENST00000550519 MMP13P45452 471 aa21.63■■□□□ 1.05
SMARCC2-210ENST00000550519 CDH6P55285 790 aa21.63■■□□□ 1.05
SMARCC2-210ENST00000550519 NFATC3Q12968 1075 aa21.63■■□□□ 1.05
SMARCC2-210ENST00000550519 SQSTM1Q13501 440 aa21.63■■□□□ 1.05
SMARCC2-210ENST00000550519 PEX6Q13608 980 aa21.63■■□□□ 1.05
SMARCC2-210ENST00000550519 ARMC12Q5T9G4 340 aa21.63■■□□□ 1.05
SMARCC2-210ENST00000550519 TXNRD3NBQ6F5E7 133 aa21.63■■□□□ 1.05
SMARCC2-210ENST00000550519 USP45Q70EL2 814 aa21.63■■□□□ 1.05
SMARCC2-210ENST00000550519 NSMCE1Q8WV22 266 aa21.63■■□□□ 1.05
SMARCC2-210ENST00000550519 BPIFA3Q9BQP9 254 aa21.63■■□□□ 1.05
SMARCC2-210ENST00000550519 NAT10Q9H0A0 1025 aaKnown RBP21.63■■□□□ 1.05
SMARCC2-210ENST00000550519 CLMPQ9H6B4 373 aa21.63■■□□□ 1.05
SMARCC2-210ENST00000550519 PCDH18Q9HCL0 1135 aa21.63■■□□□ 1.05
SMARCC2-210ENST00000550519 STARD5Q9NSY2 213 aa21.63■■□□□ 1.05
SMARCC2-210ENST00000550519 BOD1L1Q8NFC6 3051 aa21.63■■□□□ 1.05
SMARCC2-210ENST00000550519 GOLGA6CA6NDK9 693 aa21.62■■□□□ 1.05
SMARCC2-210ENST00000550519 GOLGA6BA6NDN3 693 aa21.62■■□□□ 1.05
SMARCC2-210ENST00000550519 PPM1DO15297 605 aa21.62■■□□□ 1.05
SMARCC2-210ENST00000550519 FZD6O60353 706 aa21.62■■□□□ 1.05
SMARCC2-210ENST00000550519 GOLGA6DP0CG33 693 aa21.62■■□□□ 1.05
SMARCC2-210ENST00000550519 SKILP12757 684 aa21.62■■□□□ 1.05
SMARCC2-210ENST00000550519 ITGB6P18564 788 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms