RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 TSEN2Q8NCE0 465 aaKnown RBP7.65□□□□□ -1.18
NEK3-201ENST00000550331 GPR156Q8NFN8 814 aa7.65□□□□□ -1.18
NEK3-201ENST00000550331 OR56A4Q8NGH8 313 aa7.65□□□□□ -1.18
NEK3-201ENST00000550331 FNIP1Q8TF40 1166 aa7.65□□□□□ -1.18
NEK3-201ENST00000550331 FUBP1Q96AE4 644 aaKnown RBP7.65□□□□□ -1.18
NEK3-201ENST00000550331 CELF6Q96J87 481 aaKnown RBP7.65□□□□□ -1.18
NEK3-201ENST00000550331 PSKH2Q96QS6 385 aa7.65□□□□□ -1.18
NEK3-201ENST00000550331 CCNL2Q96S94 520 aaPredicted RBP7.65□□□□□ -1.18
NEK3-201ENST00000550331 SYT11Q9BT88 431 aa7.65□□□□□ -1.18
NEK3-201ENST00000550331 CINPQ9BW66 212 aaPredicted RBP7.65□□□□□ -1.18
NEK3-201ENST00000550331 LRRN3Q9H3W5 708 aa7.65□□□□□ -1.18
NEK3-201ENST00000550331 DHX35Q9H5Z1 703 aaKnown RBP7.65□□□□□ -1.18
NEK3-201ENST00000550331 SP110Q9HB58 689 aa7.65□□□□□ -1.18
NEK3-201ENST00000550331 EPB41L5Q9HCM4 733 aa7.65□□□□□ -1.18
NEK3-201ENST00000550331 FGF22Q9HCT0 170 aa7.65□□□□□ -1.18
NEK3-201ENST00000550331 ANO10Q9NW15 660 aa7.65□□□□□ -1.18
NEK3-201ENST00000550331 MYO6Q9UM54 1294 aa7.65□□□□□ -1.18
NEK3-201ENST00000550331 RP1P56715 2156 aa7.64□□□□□ -1.19
NEK3-201ENST00000550331 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.64□□□□□ -1.19
NEK3-201ENST00000550331 A0A1W2PQ67 120 aa7.64□□□□□ -1.19
NEK3-201ENST00000550331 TMEM202A6NGA9 273 aa7.64□□□□□ -1.19
NEK3-201ENST00000550331 SHISA8B8ZZ34 492 aa7.64□□□□□ -1.19
NEK3-201ENST00000550331 PDE2AO00408 941 aaPredicted RBP7.64□□□□□ -1.19
NEK3-201ENST00000550331 EEF2KO00418 725 aaKnown RBP7.64□□□□□ -1.19
NEK3-201ENST00000550331 TRAFD1O14545 582 aaPredicted RBP7.64□□□□□ -1.19
NEK3-201ENST00000550331 NVLO15381 856 aaKnown RBP7.64□□□□□ -1.19
NEK3-201ENST00000550331 DAPK3O43293 454 aa7.64□□□□□ -1.19
NEK3-201ENST00000550331 NUDT21O43809 227 aaKnown RBP7.64□□□□□ -1.19
NEK3-201ENST00000550331 PRPSAP2O60256 369 aa7.64□□□□□ -1.19
NEK3-201ENST00000550331 NOBOXO60393 691 aa7.64□□□□□ -1.19
NEK3-201ENST00000550331 RNF8O76064 485 aa7.64□□□□□ -1.19
NEK3-201ENST00000550331 ELFN1P0C7U0 828 aa7.64□□□□□ -1.19
NEK3-201ENST00000550331 JMJD7P0C870 316 aa7.64□□□□□ -1.19
NEK3-201ENST00000550331 ATP1A3P13637 1013 aa7.64□□□□□ -1.19
NEK3-201ENST00000550331 PSMA2P25787 234 aa7.64□□□□□ -1.19
NEK3-201ENST00000550331 NFKBIAP25963 317 aa7.64□□□□□ -1.19
NEK3-201ENST00000550331 SLC5A2P31639 672 aa7.64□□□□□ -1.19
NEK3-201ENST00000550331 TRIM23P36406 574 aa7.64□□□□□ -1.19
NEK3-201ENST00000550331 HCAR3P49019 387 aa7.64□□□□□ -1.19
NEK3-201ENST00000550331 PAPOLAP51003 745 aaKnown RBP7.64□□□□□ -1.19
NEK3-201ENST00000550331 RENBPP51606 427 aa7.64□□□□□ -1.19
NEK3-201ENST00000550331 NFKB2Q00653 900 aa7.64□□□□□ -1.19
NEK3-201ENST00000550331 ZFP36L1Q07352 338 aaKnown RBP7.64□□□□□ -1.19
NEK3-201ENST00000550331 BCL2L1Q07817 233 aa7.64□□□□□ -1.19
NEK3-201ENST00000550331 HLTFQ14527 1009 aaKnown RBP eCLIP7.64□□□□□ -1.19
NEK3-201ENST00000550331 STX1AQ16623 288 aa7.64□□□□□ -1.19
NEK3-201ENST00000550331 CA9Q16790 459 aa7.64□□□□□ -1.19
NEK3-201ENST00000550331 ZSCAN23Q3MJ62 389 aa7.64□□□□□ -1.19
NEK3-201ENST00000550331 C14orf28Q4W4Y0 310 aa7.64□□□□□ -1.19
NEK3-201ENST00000550331 KCTD16Q68DU8 428 aa7.64□□□□□ -1.19
NEK3-201ENST00000550331 SASS6Q6UVJ0 657 aa7.64□□□□□ -1.19
NEK3-201ENST00000550331 LIPIQ6XZB0 460 aa7.64□□□□□ -1.19
NEK3-201ENST00000550331 ZNF574Q6ZN55 896 aaPredicted RBP7.64□□□□□ -1.19
NEK3-201ENST00000550331 ATG14Q6ZNE5 492 aa7.64□□□□□ -1.19
NEK3-201ENST00000550331 DPPA4Q7L190 304 aa7.64□□□□□ -1.19
NEK3-201ENST00000550331 IRF2BP2Q7Z5L9 587 aa7.64□□□□□ -1.19
NEK3-201ENST00000550331 SPRED1Q7Z699 444 aa7.64□□□□□ -1.19
NEK3-201ENST00000550331 TAF8Q7Z7C8 310 aa7.64□□□□□ -1.19
NEK3-201ENST00000550331 ARHGAP12Q8IWW6 846 aa7.64□□□□□ -1.19
NEK3-201ENST00000550331 EXD3Q8N9H8 876 aa7.64□□□□□ -1.19
NEK3-201ENST00000550331 PLA2G15Q8NCC3 412 aa7.64□□□□□ -1.19
NEK3-201ENST00000550331 FAM46DQ8NEK8 389 aa7.64□□□□□ -1.19
NEK3-201ENST00000550331 KIAA1524Q8TCG1 905 aa7.64□□□□□ -1.19
NEK3-201ENST00000550331 OR1E3Q8WZA6 343 aa7.64□□□□□ -1.19
NEK3-201ENST00000550331 ZNF599Q96NL3 588 aa7.64□□□□□ -1.19
NEK3-201ENST00000550331 SNRNP25Q9BV90 132 aaKnown RBP7.64□□□□□ -1.19
NEK3-201ENST00000550331 FOXP3Q9BZS1 431 aa7.64□□□□□ -1.19
NEK3-201ENST00000550331 WDR26Q9H7D7 661 aa7.64□□□□□ -1.19
NEK3-201ENST00000550331 GPATCH2LQ9NWQ4 482 aa7.64□□□□□ -1.19
NEK3-201ENST00000550331 KCTD5Q9NXV2 234 aa7.64□□□□□ -1.19
NEK3-201ENST00000550331 SEPT3Q9UH03 358 aa7.64□□□□□ -1.19
NEK3-201ENST00000550331 MYO9AB2RTY4 2548 aa7.64□□□□□ -1.19
NEK3-201ENST00000550331 DOCK4Q8N1I0 1966 aa7.63□□□□□ -1.19
NEK3-201ENST00000550331 PRSS38A1L453 326 aa7.63□□□□□ -1.19
NEK3-201ENST00000550331 TMEM191CA6NGB0 347 aa7.63□□□□□ -1.19
NEK3-201ENST00000550331 B4DGG1 531 aa7.63□□□□□ -1.19
NEK3-201ENST00000550331 DFFAO00273 331 aa7.63□□□□□ -1.19
NEK3-201ENST00000550331 SOCS5O75159 536 aa7.63□□□□□ -1.19
NEK3-201ENST00000550331 PRKCGP05129 697 aa7.63□□□□□ -1.19
NEK3-201ENST00000550331 LIPCP11150 499 aa7.63□□□□□ -1.19
NEK3-201ENST00000550331 MYCLP1P12525 358 aaPredicted RBP7.63□□□□□ -1.19
NEK3-201ENST00000550331 GZMAP12544 262 aa7.63□□□□□ -1.19
NEK3-201ENST00000550331 GM2AP17900 193 aa7.63□□□□□ -1.19
NEK3-201ENST00000550331 ERCC2P18074 760 aa7.63□□□□□ -1.19
NEK3-201ENST00000550331 CDK11BP21127 795 aaKnown RBP7.63□□□□□ -1.19
NEK3-201ENST00000550331 TNFAIP3P21580 790 aa7.63□□□□□ -1.19
NEK3-201ENST00000550331 HSPA9P38646 679 aaKnown RBP7.63□□□□□ -1.19
NEK3-201ENST00000550331 MAP2K3P46734 347 aa7.63□□□□□ -1.19
NEK3-201ENST00000550331 SCNN1BP51168 640 aa7.63□□□□□ -1.19
NEK3-201ENST00000550331 DPYSQ14117 519 aa7.63□□□□□ -1.19
NEK3-201ENST00000550331 ARHGEF7Q14155 803 aa7.63□□□□□ -1.19
NEK3-201ENST00000550331 NCAPHQ15003 741 aa7.63□□□□□ -1.19
NEK3-201ENST00000550331 TCEA2Q15560 299 aa7.63□□□□□ -1.19
NEK3-201ENST00000550331 CLPPQ16740 277 aaPredicted RBP7.63□□□□□ -1.19
NEK3-201ENST00000550331 TMCO4Q5TGY1 634 aa7.63□□□□□ -1.19
NEK3-201ENST00000550331 SPECC1LQ69YQ0 1117 aa7.63□□□□□ -1.19
NEK3-201ENST00000550331 PNCKQ6P2M8 343 aa7.63□□□□□ -1.19
NEK3-201ENST00000550331 XKR5Q6UX68 686 aa7.63□□□□□ -1.19
NEK3-201ENST00000550331 CYP4V2Q6ZWL3 525 aaPredicted RBP7.63□□□□□ -1.19
NEK3-201ENST00000550331 LYSMD3Q7Z3D4 306 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms