RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 TMEM151AQ8N4L1 468 aa12.12□□□□□ -0.47
VDR-208ENST00000550325 FBXO30Q8TB52 745 aa12.12□□□□□ -0.47
VDR-208ENST00000550325 S100ZQ8WXG8 99 aa12.12□□□□□ -0.47
VDR-208ENST00000550325 LRRC58Q96CX6 371 aa12.12□□□□□ -0.47
VDR-208ENST00000550325 KIF12Q96FN5 646 aa12.12□□□□□ -0.47
VDR-208ENST00000550325 DMRTB1Q96MA1 342 aa12.12□□□□□ -0.47
VDR-208ENST00000550325 MRPL57Q9BQC6 102 aaKnown RBP12.12□□□□□ -0.47
VDR-208ENST00000550325 MID1IP1Q9NPA3 183 aa12.12□□□□□ -0.47
VDR-208ENST00000550325 MAP10Q9P2G4 905 aa12.12□□□□□ -0.47
VDR-208ENST00000550325 SLC2A6Q9UGQ3 507 aa12.12□□□□□ -0.47
VDR-208ENST00000550325 PTPRFP10586 1907 aa12.12□□□□□ -0.47
VDR-208ENST00000550325 A8MT66 165 aa12.11□□□□□ -0.47
VDR-208ENST00000550325 EIF3FO00303 357 aaPredicted RBP12.11□□□□□ -0.47
VDR-208ENST00000550325 HS6ST1O60243 411 aa12.11□□□□□ -0.47
VDR-208ENST00000550325 PEX10O60683 326 aa12.11□□□□□ -0.47
VDR-208ENST00000550325 PMPCBO75439 489 aa12.11□□□□□ -0.47
VDR-208ENST00000550325 CCNKO75909 580 aa12.11□□□□□ -0.47
VDR-208ENST00000550325 GSNP06396 782 aa12.11□□□□□ -0.47
VDR-208ENST00000550325 FSHRP23945 695 aa12.11□□□□□ -0.47
VDR-208ENST00000550325 GRSF1Q12849 480 aaKnown RBP eCLIP12.11□□□□□ -0.47
VDR-208ENST00000550325 TMEM132DQ14C87 1099 aa12.11□□□□□ -0.47
VDR-208ENST00000550325 PCSK7Q16549 785 aa12.11□□□□□ -0.47
VDR-208ENST00000550325 COLEC12Q5KU26 742 aa12.11□□□□□ -0.47
VDR-208ENST00000550325 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.11□□□□□ -0.47
VDR-208ENST00000550325 RBM20Q5T481 1227 aaKnown RBP12.11□□□□□ -0.47
VDR-208ENST00000550325 ANKRD34AQ69YU3 496 aa12.11□□□□□ -0.47
VDR-208ENST00000550325 BNIPLQ7Z465 357 aa12.11□□□□□ -0.47
VDR-208ENST00000550325 ARMC8Q8IUR7 673 aa12.11□□□□□ -0.47
VDR-208ENST00000550325 FAM151AQ8WW52 585 aa12.11□□□□□ -0.47
VDR-208ENST00000550325 TMBIM1Q969X1 311 aa12.11□□□□□ -0.47
VDR-208ENST00000550325 KCNA7Q96RP8 456 aa12.11□□□□□ -0.47
VDR-208ENST00000550325 CGREF1Q99674 301 aa12.11□□□□□ -0.47
VDR-208ENST00000550325 OSBPL10Q9BXB5 764 aa12.11□□□□□ -0.47
VDR-208ENST00000550325 TRIT1Q9H3H1 467 aaKnown RBP12.11□□□□□ -0.47
VDR-208ENST00000550325 TOR3AQ9H497 397 aa12.11□□□□□ -0.47
VDR-208ENST00000550325 NEK6Q9HC98 313 aa12.11□□□□□ -0.47
VDR-208ENST00000550325 ACTR3BQ9P1U1 418 aa12.11□□□□□ -0.47
VDR-208ENST00000550325 MOSPD1Q9UJG1 213 aa12.11□□□□□ -0.47
VDR-208ENST00000550325 SPO11Q9Y5K1 396 aa12.11□□□□□ -0.47
VDR-208ENST00000550325 PPP6CO00743 305 aa12.11□□□□□ -0.47
VDR-208ENST00000550325 IPO13O94829 963 aaKnown RBP12.11□□□□□ -0.47
VDR-208ENST00000550325 ALDOCP09972 364 aaKnown RBP12.11□□□□□ -0.47
VDR-208ENST00000550325 TGFBR1P36897 503 aa12.11□□□□□ -0.47
VDR-208ENST00000550325 KPNA2P52292 529 aaKnown RBP12.11□□□□□ -0.47
VDR-208ENST00000550325 RABGGTBP53611 331 aa12.11□□□□□ -0.47
VDR-208ENST00000550325 NCS1P62166 190 aa12.11□□□□□ -0.47
VDR-208ENST00000550325 XAF1Q6GPH4 301 aa12.11□□□□□ -0.47
VDR-208ENST00000550325 OSCP1Q8WVF1 389 aa12.11□□□□□ -0.47
VDR-208ENST00000550325 RORBQ92753 470 aa12.11□□□□□ -0.47
VDR-208ENST00000550325 SLC30A3Q99726 388 aa12.11□□□□□ -0.47
VDR-208ENST00000550325 EIF2B3Q9NR50 452 aaKnown RBP12.11□□□□□ -0.47
VDR-208ENST00000550325 SETD4Q9NVD3 440 aa12.11□□□□□ -0.47
VDR-208ENST00000550325 RGS17Q9UGC6 210 aaPredicted RBP12.11□□□□□ -0.47
VDR-208ENST00000550325 CCDC162PA2VCL2 907 aa12.11□□□□□ -0.47
VDR-208ENST00000550325 NPHS1O60500 1241 aa12.11□□□□□ -0.47
VDR-208ENST00000550325 MT-CYBP00156 380 aaPredicted RBP12.11□□□□□ -0.47
VDR-208ENST00000550325 CDH1P12830 882 aa12.11□□□□□ -0.47
VDR-208ENST00000550325 PRKACGP22612 351 aa12.11□□□□□ -0.47
VDR-208ENST00000550325 GTF2E2P29084 291 aaKnown RBP12.11□□□□□ -0.47
VDR-208ENST00000550325 MAP2K4P45985 399 aa12.11□□□□□ -0.47
VDR-208ENST00000550325 TPI1P60174 286 aa12.11□□□□□ -0.47
VDR-208ENST00000550325 KCNC4Q03721 635 aa12.11□□□□□ -0.47
VDR-208ENST00000550325 VAC14Q08AM6 782 aa12.11□□□□□ -0.47
VDR-208ENST00000550325 BNIP2Q12982 314 aa12.11□□□□□ -0.47
VDR-208ENST00000550325 SPESP1Q6UW49 350 aa12.11□□□□□ -0.47
VDR-208ENST00000550325 USP43Q70EL4 1123 aa12.11□□□□□ -0.47
VDR-208ENST00000550325 MICU2Q8IYU8 434 aa12.11□□□□□ -0.47
VDR-208ENST00000550325 PNPT1Q8TCS8 783 aaKnown RBP12.11□□□□□ -0.47
VDR-208ENST00000550325 EFHD2Q96C19 240 aaPredicted RBP12.11□□□□□ -0.47
VDR-208ENST00000550325 ZNF486Q96H40 463 aaPredicted RBP12.11□□□□□ -0.47
VDR-208ENST00000550325 NSMCE2Q96MF7 247 aa12.11□□□□□ -0.47
VDR-208ENST00000550325 NODALQ96S42 347 aa12.11□□□□□ -0.47
VDR-208ENST00000550325 C17orf80Q9BSJ5 609 aa12.11□□□□□ -0.47
VDR-208ENST00000550325 RHOBTB2Q9BYZ6 727 aa12.11□□□□□ -0.47
VDR-208ENST00000550325 REXO4Q9GZR2 422 aaKnown RBP12.11□□□□□ -0.47
VDR-208ENST00000550325 DPEP3Q9H4B8 488 aa12.11□□□□□ -0.47
VDR-208ENST00000550325 GPN2Q9H9Y4 310 aaPredicted RBP12.11□□□□□ -0.47
VDR-208ENST00000550325 PRDM8Q9NQV8 689 aa12.11□□□□□ -0.47
VDR-208ENST00000550325 GIMAP4Q9NUV9 329 aa12.11□□□□□ -0.47
VDR-208ENST00000550325 IFT52Q9Y366 437 aa12.11□□□□□ -0.47
VDR-208ENST00000550325 SNX10Q9Y5X0 201 aa12.11□□□□□ -0.47
VDR-208ENST00000550325 CCL22O00626 93 aa12.1□□□□□ -0.47
VDR-208ENST00000550325 MAFGO15525 162 aa12.1□□□□□ -0.47
VDR-208ENST00000550325 B4GALT4O60513 344 aa12.1□□□□□ -0.47
VDR-208ENST00000550325 CYP4B1P13584 511 aa12.1□□□□□ -0.47
VDR-208ENST00000550325 SNX16P57768 344 aa12.1□□□□□ -0.47
VDR-208ENST00000550325 KCNK10P57789 538 aa12.1□□□□□ -0.47
VDR-208ENST00000550325 YWHAHQ04917 246 aaPredicted RBP12.1□□□□□ -0.47
VDR-208ENST00000550325 UGP2Q16851 508 aa12.1□□□□□ -0.47
VDR-208ENST00000550325 PYCR3Q53H96 274 aa12.1□□□□□ -0.47
VDR-208ENST00000550325 ZDHHC13Q8IUH4 622 aa12.1□□□□□ -0.47
VDR-208ENST00000550325 MMAAQ8IVH4 418 aaKnown RBP12.1□□□□□ -0.47
VDR-208ENST00000550325 TBC1D21Q8IYX1 336 aa12.1□□□□□ -0.47
VDR-208ENST00000550325 TTC30BQ8N4P2 665 aa12.1□□□□□ -0.47
VDR-208ENST00000550325 KHSRPQ92945 711 aaKnown RBP eCLIP12.1□□□□□ -0.47
VDR-208ENST00000550325 ZUFSPQ96AP4 578 aa12.1□□□□□ -0.47
VDR-208ENST00000550325 LRRC4Q9HBW1 653 aa12.1□□□□□ -0.47
VDR-208ENST00000550325 INTS10Q9NVR2 710 aaKnown RBP12.1□□□□□ -0.47
VDR-208ENST00000550325 PCDHGA8Q9Y5G5 932 aa12.1□□□□□ -0.47
VDR-208ENST00000550325 ILVBLA1L0T0 632 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms